RNA–Protein interactions for RNA: ENST00000567254.5

INO80E-209, Transcript of INO80 complex subunit E, humanhuman

TSL 2 BASIC

Gene INO80E, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-209ENST00000567254 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
INO80E-209ENST00000567254 ABCC9O60706 1549 aa29.1■■■□□ 2.25
INO80E-209ENST00000567254 CCDC180Q9P1Z9 1646 aa28.63■■■□□ 2.17
INO80E-209ENST00000567254 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
INO80E-209ENST00000567254 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
INO80E-209ENST00000567254 NACADO15069 1562 aa27.24■■□□□ 1.95
INO80E-209ENST00000567254 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
INO80E-209ENST00000567254 PABPN1Q86U42 306 aaKnown RBP eCLIP27.15■■□□□ 1.94
INO80E-209ENST00000567254 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
INO80E-209ENST00000567254 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
INO80E-209ENST00000567254 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
INO80E-209ENST00000567254 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
INO80E-209ENST00000567254 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
INO80E-209ENST00000567254 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
INO80E-209ENST00000567254 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
INO80E-209ENST00000567254 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
INO80E-209ENST00000567254 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
INO80E-209ENST00000567254 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
INO80E-209ENST00000567254 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
INO80E-209ENST00000567254 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
INO80E-209ENST00000567254 CUX2O14529 1486 aa25.15■■□□□ 1.62
INO80E-209ENST00000567254 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
INO80E-209ENST00000567254 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
INO80E-209ENST00000567254 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
INO80E-209ENST00000567254 NESP48681 1621 aa24.94■■□□□ 1.58
INO80E-209ENST00000567254 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
INO80E-209ENST00000567254 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
INO80E-209ENST00000567254 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
INO80E-209ENST00000567254 BAZ1AQ9NRL2 1556 aaPredicted RBP24.77■■□□□ 1.56
INO80E-209ENST00000567254 PEG3Q9GZU2 1588 aa24.7■■□□□ 1.54
INO80E-209ENST00000567254 MROH2BQ7Z745 1585 aa24.65■■□□□ 1.54
INO80E-209ENST00000567254 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
INO80E-209ENST00000567254 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
INO80E-209ENST00000567254 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
INO80E-209ENST00000567254 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
INO80E-209ENST00000567254 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
INO80E-209ENST00000567254 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
INO80E-209ENST00000567254 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
INO80E-209ENST00000567254 WDR62O43379 1518 aa24.26■■□□□ 1.47
INO80E-209ENST00000567254 WIZO95785 1651 aa24.26■■□□□ 1.47
INO80E-209ENST00000567254 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
INO80E-209ENST00000567254 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
INO80E-209ENST00000567254 CFTRP13569 1480 aa24.12■■□□□ 1.45
INO80E-209ENST00000567254 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
INO80E-209ENST00000567254 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
INO80E-209ENST00000567254 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
INO80E-209ENST00000567254 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
INO80E-209ENST00000567254 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
INO80E-209ENST00000567254 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
INO80E-209ENST00000567254 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
INO80E-209ENST00000567254 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
INO80E-209ENST00000567254 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
INO80E-209ENST00000567254 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
INO80E-209ENST00000567254 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
INO80E-209ENST00000567254 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
INO80E-209ENST00000567254 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
INO80E-209ENST00000567254 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
INO80E-209ENST00000567254 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
INO80E-209ENST00000567254 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.366e-8■■■■■ 36.5
INO80E-209ENST00000567254 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
INO80E-209ENST00000567254 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
INO80E-209ENST00000567254 FBLN2P98095 1184 aa23.44■■□□□ 1.34
INO80E-209ENST00000567254 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
INO80E-209ENST00000567254 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
INO80E-209ENST00000567254 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
INO80E-209ENST00000567254 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
INO80E-209ENST00000567254 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
INO80E-209ENST00000567254 SOGA1O94964 1423 aa23.33■■□□□ 1.32
INO80E-209ENST00000567254 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
INO80E-209ENST00000567254 CHD1O14646 1710 aa23.3■■□□□ 1.32
INO80E-209ENST00000567254 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
INO80E-209ENST00000567254 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
INO80E-209ENST00000567254 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
INO80E-209ENST00000567254 CUX1P39880 1505 aa23.15■■□□□ 1.3
INO80E-209ENST00000567254 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
INO80E-209ENST00000567254 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
INO80E-209ENST00000567254 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
INO80E-209ENST00000567254 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
INO80E-209ENST00000567254 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
INO80E-209ENST00000567254 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
INO80E-209ENST00000567254 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
INO80E-209ENST00000567254 ABCA10Q8WWZ4 1543 aa22.93■■□□□ 1.26
INO80E-209ENST00000567254 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
INO80E-209ENST00000567254 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
INO80E-209ENST00000567254 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
INO80E-209ENST00000567254 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
INO80E-209ENST00000567254 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
INO80E-209ENST00000567254 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.24
INO80E-209ENST00000567254 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
INO80E-209ENST00000567254 NUP160Q12769 1436 aa22.78■■□□□ 1.24
INO80E-209ENST00000567254 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
INO80E-209ENST00000567254 FHAD1B1AJZ9 1412 aa22.71■■□□□ 1.23
INO80E-209ENST00000567254 ADAMTS12P58397 1594 aa22.7■■□□□ 1.22
INO80E-209ENST00000567254 TOP2BQ02880 1626 aa22.64■■□□□ 1.22
INO80E-209ENST00000567254 JPH4Q96JJ6 628 aa22.62■■□□□ 1.21
INO80E-209ENST00000567254 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
INO80E-209ENST00000567254 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
INO80E-209ENST00000567254 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
INO80E-209ENST00000567254 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
INO80E-209ENST00000567254 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms