RNA–Protein interactions for RNA: ENST00000563040.5

INO80E-206, Transcript of INO80 complex subunit E, humanhuman

TSL 3

Gene INO80E, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-206ENST00000563040 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
INO80E-206ENST00000563040 CCDC180Q9P1Z9 1646 aa35.5■■■■□ 3.27
INO80E-206ENST00000563040 ABCC9O60706 1549 aa34.93■■■■□ 3.18
INO80E-206ENST00000563040 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
INO80E-206ENST00000563040 NACADO15069 1562 aa33.37■■■□□ 2.93
INO80E-206ENST00000563040 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
INO80E-206ENST00000563040 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
INO80E-206ENST00000563040 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
INO80E-206ENST00000563040 UNC13AQ9UPW8 1703 aa32.87■■■□□ 2.85
INO80E-206ENST00000563040 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
INO80E-206ENST00000563040 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
INO80E-206ENST00000563040 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
INO80E-206ENST00000563040 SCRIBQ14160 1630 aa32.3■■■□□ 2.76
INO80E-206ENST00000563040 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
INO80E-206ENST00000563040 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
INO80E-206ENST00000563040 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
INO80E-206ENST00000563040 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
INO80E-206ENST00000563040 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
INO80E-206ENST00000563040 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
INO80E-206ENST00000563040 BAZ1AQ9NRL2 1556 aaPredicted RBP30.76■■■□□ 2.52
INO80E-206ENST00000563040 NCAPD3P42695 1498 aa30.76■■■□□ 2.51
INO80E-206ENST00000563040 ATAD2BQ9ULI0 1458 aa30.73■■■□□ 2.51
INO80E-206ENST00000563040 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
INO80E-206ENST00000563040 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
INO80E-206ENST00000563040 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
INO80E-206ENST00000563040 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
INO80E-206ENST00000563040 BAZ1BQ9UIG0 1483 aaKnown RBP30.46■■■□□ 2.47
INO80E-206ENST00000563040 WIZO95785 1651 aa30.24■■■□□ 2.43
INO80E-206ENST00000563040 NESP48681 1621 aa30.14■■■□□ 2.42
INO80E-206ENST00000563040 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
INO80E-206ENST00000563040 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
INO80E-206ENST00000563040 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
INO80E-206ENST00000563040 CUX2O14529 1486 aa29.95■■■□□ 2.39
INO80E-206ENST00000563040 TOP2AP11388 1531 aaKnown RBP29.89■■■□□ 2.38
INO80E-206ENST00000563040 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
INO80E-206ENST00000563040 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
INO80E-206ENST00000563040 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
INO80E-206ENST00000563040 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
INO80E-206ENST00000563040 CFTRP13569 1480 aa29.61■■■□□ 2.33
INO80E-206ENST00000563040 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
INO80E-206ENST00000563040 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
INO80E-206ENST00000563040 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
INO80E-206ENST00000563040 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
INO80E-206ENST00000563040 WDR62O43379 1518 aa29.5■■■□□ 2.31
INO80E-206ENST00000563040 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
INO80E-206ENST00000563040 DNAJC5Q9H3Z4 198 aa29.33■■■□□ 2.29
INO80E-206ENST00000563040 URB2Q14146 1524 aaKnown RBP29.27■■■□□ 2.28
INO80E-206ENST00000563040 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
INO80E-206ENST00000563040 DNMBPQ6XZF7 1577 aa28.99■■■□□ 2.23
INO80E-206ENST00000563040 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
INO80E-206ENST00000563040 SUPT5HO00267 1087 aaKnown RBP28.91■■■□□ 2.22
INO80E-206ENST00000563040 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
INO80E-206ENST00000563040 ZNF608Q9ULD9 1512 aaPredicted RBP28.81■■■□□ 2.2
INO80E-206ENST00000563040 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
INO80E-206ENST00000563040 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.19
INO80E-206ENST00000563040 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
INO80E-206ENST00000563040 CUX1P39880 1505 aa28.69■■■□□ 2.18
INO80E-206ENST00000563040 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
INO80E-206ENST00000563040 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
INO80E-206ENST00000563040 AQRO60306 1485 aaKnown RBP eCLIP28.56■■■□□ 2.16
INO80E-206ENST00000563040 SOGA1O94964 1423 aa28.55■■■□□ 2.16
INO80E-206ENST00000563040 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
INO80E-206ENST00000563040 OSCARQ8IYS5 282 aa28.52■■■□□ 2.16
INO80E-206ENST00000563040 CHD1O14646 1710 aa28.49■■■□□ 2.15
INO80E-206ENST00000563040 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
INO80E-206ENST00000563040 BIVM-ERCC5R4GMW8 1640 aa28.41■■■□□ 2.14
INO80E-206ENST00000563040 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
INO80E-206ENST00000563040 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
INO80E-206ENST00000563040 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
INO80E-206ENST00000563040 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
INO80E-206ENST00000563040 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
INO80E-206ENST00000563040 ABCA5Q8WWZ7 1642 aa28.33■■■□□ 2.13
INO80E-206ENST00000563040 WRNQ14191 1432 aaPredicted RBP eCLIP28.33■■■□□ 2.13
INO80E-206ENST00000563040 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
INO80E-206ENST00000563040 MAGI1Q96QZ7 1491 aaPredicted RBP28.29■■■□□ 2.12
INO80E-206ENST00000563040 RIMBP3CA6NJZ7 1639 aa28.28■■■□□ 2.12
INO80E-206ENST00000563040 RIMBP3BA6NNM3 1639 aa28.28■■■□□ 2.12
INO80E-206ENST00000563040 RIMBP3Q9UFD9 1639 aa28.28■■■□□ 2.12
INO80E-206ENST00000563040 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
INO80E-206ENST00000563040 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
INO80E-206ENST00000563040 FBLN2P98095 1184 aa28.2■■■□□ 2.1
INO80E-206ENST00000563040 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
INO80E-206ENST00000563040 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
INO80E-206ENST00000563040 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
INO80E-206ENST00000563040 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
INO80E-206ENST00000563040 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
INO80E-206ENST00000563040 ERICH3Q5RHP9 1530 aa28■■■□□ 2.07
INO80E-206ENST00000563040 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
INO80E-206ENST00000563040 ARAP1Q96P48 1450 aa27.95■■■□□ 2.07
INO80E-206ENST00000563040 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
INO80E-206ENST00000563040 CEP170Q5SW79 1584 aa27.88■■■□□ 2.05
INO80E-206ENST00000563040 NUP160Q12769 1436 aa27.85■■■□□ 2.05
INO80E-206ENST00000563040 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
INO80E-206ENST00000563040 SHROOM2Q13796 1616 aa27.75■■■□□ 2.03
INO80E-206ENST00000563040 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
INO80E-206ENST00000563040 CUL7Q14999 1698 aa27.73■■■□□ 2.03
INO80E-206ENST00000563040 ERCC6L2Q5T890 1561 aa27.7■■■□□ 2.03
INO80E-206ENST00000563040 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
INO80E-206ENST00000563040 IGF1RP08069 1367 aa27.65■■■□□ 2.02
INO80E-206ENST00000563040 PRG4Q92954 1404 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms