RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
CLHC1-203ENST00000406076 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
CLHC1-203ENST00000406076 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
CLHC1-203ENST00000406076 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
CLHC1-203ENST00000406076 FOXD1Q16676 465 aa14.42□□□□□ -0.1
CLHC1-203ENST00000406076 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
CLHC1-203ENST00000406076 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
CLHC1-203ENST00000406076 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
CLHC1-203ENST00000406076 ADRA2BP18089 450 aa13.51□□□□□ -0.25
CLHC1-203ENST00000406076 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
CLHC1-203ENST00000406076 MSH5O43196 834 aa13.45□□□□□ -0.26
CLHC1-203ENST00000406076 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
CLHC1-203ENST00000406076 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
CLHC1-203ENST00000406076 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
CLHC1-203ENST00000406076 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
CLHC1-203ENST00000406076 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
CLHC1-203ENST00000406076 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
CLHC1-203ENST00000406076 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CLHC1-203ENST00000406076 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
CLHC1-203ENST00000406076 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
CLHC1-203ENST00000406076 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
CLHC1-203ENST00000406076 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
CLHC1-203ENST00000406076 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
CLHC1-203ENST00000406076 KCNA4P22459 653 aa11.41□□□□□ -0.58
CLHC1-203ENST00000406076 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
CLHC1-203ENST00000406076 C1QBPQ07021 282 aaKnown RBP11.33□□□□□ -0.6
CLHC1-203ENST00000406076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLHC1-203ENST00000406076 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
CLHC1-203ENST00000406076 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
CLHC1-203ENST00000406076 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
CLHC1-203ENST00000406076 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
CLHC1-203ENST00000406076 CAPN15O75808 1086 aa10.88□□□□□ -0.67
CLHC1-203ENST00000406076 DSG3P32926 999 aa10.8□□□□□ -0.68
CLHC1-203ENST00000406076 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.68
CLHC1-203ENST00000406076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
CLHC1-203ENST00000406076 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
CLHC1-203ENST00000406076 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
CLHC1-203ENST00000406076 APLP2Q06481 763 aa10.74□□□□□ -0.69
CLHC1-203ENST00000406076 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
CLHC1-203ENST00000406076 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
CLHC1-203ENST00000406076 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
CLHC1-203ENST00000406076 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
CLHC1-203ENST00000406076 ABCB7O75027 752 aa10.65□□□□□ -0.71
CLHC1-203ENST00000406076 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
CLHC1-203ENST00000406076 ZBTB22O15209 634 aa10.49□□□□□ -0.73
CLHC1-203ENST00000406076 POLA2Q14181 598 aa10.45□□□□□ -0.74
CLHC1-203ENST00000406076 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
CLHC1-203ENST00000406076 RBM42Q9BTD8 480 aaKnown RBP10.27□□□□□ -0.77
CLHC1-203ENST00000406076 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
CLHC1-203ENST00000406076 POTEHQ6S545 545 aa10.23□□□□□ -0.77
CLHC1-203ENST00000406076 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
CLHC1-203ENST00000406076 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
CLHC1-203ENST00000406076 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
CLHC1-203ENST00000406076 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
CLHC1-203ENST00000406076 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
CLHC1-203ENST00000406076 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
CLHC1-203ENST00000406076 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
CLHC1-203ENST00000406076 FBLN2P98095 1184 aa10□□□□□ -0.81
CLHC1-203ENST00000406076 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
CLHC1-203ENST00000406076 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.81
CLHC1-203ENST00000406076 NISCHQ9Y2I1 1504 aa9.92□□□□□ -0.82
CLHC1-203ENST00000406076 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
CLHC1-203ENST00000406076 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
CLHC1-203ENST00000406076 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
CLHC1-203ENST00000406076 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
CLHC1-203ENST00000406076 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
CLHC1-203ENST00000406076 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
CLHC1-203ENST00000406076 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
CLHC1-203ENST00000406076 FXR2P51116 673 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLHC1-203ENST00000406076 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
CLHC1-203ENST00000406076 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
CLHC1-203ENST00000406076 ABCC9O60706 1549 aa9.7□□□□□ -0.86
CLHC1-203ENST00000406076 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLHC1-203ENST00000406076 HAX1O00165 279 aa9.63□□□□□ -0.87
CLHC1-203ENST00000406076 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
CLHC1-203ENST00000406076 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
CLHC1-203ENST00000406076 DAXXQ9UER7 740 aaPredicted RBP9.62□□□□□ -0.87
CLHC1-203ENST00000406076 PRR29P0C7W0 189 aa9.57□□□□□ -0.88
CLHC1-203ENST00000406076 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
CLHC1-203ENST00000406076 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
CLHC1-203ENST00000406076 EVX2Q03828 476 aa9.53□□□□□ -0.88
CLHC1-203ENST00000406076 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
CLHC1-203ENST00000406076 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
CLHC1-203ENST00000406076 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
CLHC1-203ENST00000406076 STAG3Q9UJ98 1225 aa9.4□□□□□ -0.9
CLHC1-203ENST00000406076 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.91
CLHC1-203ENST00000406076 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
CLHC1-203ENST00000406076 TAOK2Q9UL54 1235 aa9.33□□□□□ -0.92
CLHC1-203ENST00000406076 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
CLHC1-203ENST00000406076 GABBR2O75899 941 aa9.3□□□□□ -0.92
CLHC1-203ENST00000406076 PROM2Q8N271 834 aa9.29□□□□□ -0.92
CLHC1-203ENST00000406076 BCANQ96GW7 911 aa9.27□□□□□ -0.93
CLHC1-203ENST00000406076 ARXQ96QS3 562 aa9.26□□□□□ -0.93
CLHC1-203ENST00000406076 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
CLHC1-203ENST00000406076 PLCB2Q00722 1185 aa9.22□□□□□ -0.93
CLHC1-203ENST00000406076 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
CLHC1-203ENST00000406076 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-203ENST00000406076 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
CLHC1-203ENST00000406076 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
CLHC1-203ENST00000406076 ZNF579Q8NAF0 562 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms