RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
UBB-204ENST00000535788 ABCC9O60706 1549 aa20.6■□□□□ 0.89
UBB-204ENST00000535788 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
UBB-204ENST00000535788 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
UBB-204ENST00000535788 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
UBB-204ENST00000535788 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
UBB-204ENST00000535788 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
UBB-204ENST00000535788 NACADO15069 1562 aa18.89■□□□□ 0.62
UBB-204ENST00000535788 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
UBB-204ENST00000535788 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
UBB-204ENST00000535788 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
UBB-204ENST00000535788 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
UBB-204ENST00000535788 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
UBB-204ENST00000535788 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
UBB-204ENST00000535788 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
UBB-204ENST00000535788 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
UBB-204ENST00000535788 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
UBB-204ENST00000535788 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
UBB-204ENST00000535788 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
UBB-204ENST00000535788 CUX2O14529 1486 aa17.9■□□□□ 0.46
UBB-204ENST00000535788 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
UBB-204ENST00000535788 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
UBB-204ENST00000535788 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
UBB-204ENST00000535788 NESP48681 1621 aa17.5■□□□□ 0.39
UBB-204ENST00000535788 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
UBB-204ENST00000535788 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
UBB-204ENST00000535788 BAZ1AQ9NRL2 1556 aaPredicted RBP17.44■□□□□ 0.38
UBB-204ENST00000535788 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
UBB-204ENST00000535788 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
UBB-204ENST00000535788 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
UBB-204ENST00000535788 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
UBB-204ENST00000535788 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
UBB-204ENST00000535788 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
UBB-204ENST00000535788 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
UBB-204ENST00000535788 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
UBB-204ENST00000535788 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
UBB-204ENST00000535788 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
UBB-204ENST00000535788 WIZO95785 1651 aa17.15■□□□□ 0.34
UBB-204ENST00000535788 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
UBB-204ENST00000535788 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
UBB-204ENST00000535788 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
UBB-204ENST00000535788 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
UBB-204ENST00000535788 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.31
UBB-204ENST00000535788 WDR62O43379 1518 aa16.96■□□□□ 0.3
UBB-204ENST00000535788 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
UBB-204ENST00000535788 RIMBP3CA6NJZ7 1639 aa16.87■□□□□ 0.29
UBB-204ENST00000535788 RIMBP3BA6NNM3 1639 aa16.87■□□□□ 0.29
UBB-204ENST00000535788 RIMBP3Q9UFD9 1639 aa16.87■□□□□ 0.29
UBB-204ENST00000535788 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
UBB-204ENST00000535788 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
UBB-204ENST00000535788 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.28
UBB-204ENST00000535788 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
UBB-204ENST00000535788 CFTRP13569 1480 aa16.77■□□□□ 0.28
UBB-204ENST00000535788 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
UBB-204ENST00000535788 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
UBB-204ENST00000535788 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
UBB-204ENST00000535788 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
UBB-204ENST00000535788 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
UBB-204ENST00000535788 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
UBB-204ENST00000535788 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
UBB-204ENST00000535788 FBLN2P98095 1184 aa16.55■□□□□ 0.24
UBB-204ENST00000535788 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
UBB-204ENST00000535788 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
UBB-204ENST00000535788 CHD1O14646 1710 aa16.42■□□□□ 0.22
UBB-204ENST00000535788 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
UBB-204ENST00000535788 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
UBB-204ENST00000535788 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.223e-9■■□□□ 14.5
UBB-204ENST00000535788 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
UBB-204ENST00000535788 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
UBB-204ENST00000535788 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
UBB-204ENST00000535788 CUX1P39880 1505 aa16.28■□□□□ 0.2
UBB-204ENST00000535788 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
UBB-204ENST00000535788 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
UBB-204ENST00000535788 FGD5Q6ZNL6 1462 aa16.24■□□□□ 0.19
UBB-204ENST00000535788 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
UBB-204ENST00000535788 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
UBB-204ENST00000535788 SOGA1O94964 1423 aa16.2■□□□□ 0.18
UBB-204ENST00000535788 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
UBB-204ENST00000535788 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
UBB-204ENST00000535788 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
UBB-204ENST00000535788 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
UBB-204ENST00000535788 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
UBB-204ENST00000535788 WDR97A6NE52 1622 aa16.13■□□□□ 0.17
UBB-204ENST00000535788 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
UBB-204ENST00000535788 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
UBB-204ENST00000535788 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
UBB-204ENST00000535788 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
UBB-204ENST00000535788 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
UBB-204ENST00000535788 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
UBB-204ENST00000535788 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
UBB-204ENST00000535788 PBRM1Q86U86 1689 aa16.03■□□□□ 0.16
UBB-204ENST00000535788 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
UBB-204ENST00000535788 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
UBB-204ENST00000535788 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
UBB-204ENST00000535788 KDM4FA0A1W2PPD8 638 aa15.98■□□□□ 0.15
UBB-204ENST00000535788 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
UBB-204ENST00000535788 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
UBB-204ENST00000535788 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
UBB-204ENST00000535788 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
UBB-204ENST00000535788 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms