RNA–Protein interactions for RNA: ENST00000510106.5

CDK7-207, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-207ENST00000510106 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
CDK7-207ENST00000510106 CCDC180Q9P1Z9 1646 aa27.22■■□□□ 1.95
CDK7-207ENST00000510106 ABCC9O60706 1549 aa26.57■■□□□ 1.84
CDK7-207ENST00000510106 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
CDK7-207ENST00000510106 NACADO15069 1562 aa25.75■■□□□ 1.71
CDK7-207ENST00000510106 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
CDK7-207ENST00000510106 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
CDK7-207ENST00000510106 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
CDK7-207ENST00000510106 DCAF1Q9Y4B6 1507 aa25.6■■□□□ 1.69
CDK7-207ENST00000510106 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
CDK7-207ENST00000510106 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
CDK7-207ENST00000510106 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
CDK7-207ENST00000510106 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
CDK7-207ENST00000510106 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
CDK7-207ENST00000510106 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
CDK7-207ENST00000510106 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
CDK7-207ENST00000510106 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
CDK7-207ENST00000510106 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
CDK7-207ENST00000510106 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
CDK7-207ENST00000510106 NCAPD3P42695 1498 aa23.84■■□□□ 1.41
CDK7-207ENST00000510106 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
CDK7-207ENST00000510106 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
CDK7-207ENST00000510106 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
CDK7-207ENST00000510106 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
CDK7-207ENST00000510106 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
CDK7-207ENST00000510106 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
CDK7-207ENST00000510106 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
CDK7-207ENST00000510106 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
CDK7-207ENST00000510106 WIZO95785 1651 aa23.23■■□□□ 1.31
CDK7-207ENST00000510106 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
CDK7-207ENST00000510106 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
CDK7-207ENST00000510106 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.28
CDK7-207ENST00000510106 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
CDK7-207ENST00000510106 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
CDK7-207ENST00000510106 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
CDK7-207ENST00000510106 CFTRP13569 1480 aa22.97■■□□□ 1.27
CDK7-207ENST00000510106 NESP48681 1621 aa22.95■■□□□ 1.26
CDK7-207ENST00000510106 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
CDK7-207ENST00000510106 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
CDK7-207ENST00000510106 CUX2O14529 1486 aa22.83■■□□□ 1.25
CDK7-207ENST00000510106 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
CDK7-207ENST00000510106 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
CDK7-207ENST00000510106 MRC2Q9UBG0 1479 aa22.67■■□□□ 1.22
CDK7-207ENST00000510106 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
CDK7-207ENST00000510106 WDR62O43379 1518 aa22.55■■□□□ 1.2
CDK7-207ENST00000510106 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
CDK7-207ENST00000510106 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
CDK7-207ENST00000510106 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
CDK7-207ENST00000510106 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
CDK7-207ENST00000510106 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
CDK7-207ENST00000510106 IFT140Q96RY7 1462 aa22.32■■□□□ 1.16
CDK7-207ENST00000510106 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
CDK7-207ENST00000510106 SOGA1O94964 1423 aa22.21■■□□□ 1.15
CDK7-207ENST00000510106 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
CDK7-207ENST00000510106 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
CDK7-207ENST00000510106 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
CDK7-207ENST00000510106 CUX1P39880 1505 aa22.14■■□□□ 1.13
CDK7-207ENST00000510106 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
CDK7-207ENST00000510106 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
CDK7-207ENST00000510106 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
CDK7-207ENST00000510106 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.12
CDK7-207ENST00000510106 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
CDK7-207ENST00000510106 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
CDK7-207ENST00000510106 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
CDK7-207ENST00000510106 TDRD9Q8NDG6 1382 aaKnown RBP22■■□□□ 1.11
CDK7-207ENST00000510106 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.112e-6■■■■□ 22
CDK7-207ENST00000510106 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
CDK7-207ENST00000510106 BIVM-ERCC5R4GMW8 1640 aa21.92■■□□□ 1.1
CDK7-207ENST00000510106 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
CDK7-207ENST00000510106 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
CDK7-207ENST00000510106 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
CDK7-207ENST00000510106 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
CDK7-207ENST00000510106 MAGI1Q96QZ7 1491 aaPredicted RBP21.86■■□□□ 1.09
CDK7-207ENST00000510106 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
CDK7-207ENST00000510106 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
CDK7-207ENST00000510106 FBLN2P98095 1184 aa21.81■■□□□ 1.08
CDK7-207ENST00000510106 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
CDK7-207ENST00000510106 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
CDK7-207ENST00000510106 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
CDK7-207ENST00000510106 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
CDK7-207ENST00000510106 ABCA5Q8WWZ7 1642 aa21.72■■□□□ 1.07
CDK7-207ENST00000510106 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
CDK7-207ENST00000510106 IGF1RP08069 1367 aa21.7■■□□□ 1.06
CDK7-207ENST00000510106 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
CDK7-207ENST00000510106 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
CDK7-207ENST00000510106 CARMIL1Q5VZK9 1371 aa21.56■■□□□ 1.04
CDK7-207ENST00000510106 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
CDK7-207ENST00000510106 NUP160Q12769 1436 aa21.52■■□□□ 1.04
CDK7-207ENST00000510106 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
CDK7-207ENST00000510106 EEA1Q15075 1411 aa21.49■■□□□ 1.03
CDK7-207ENST00000510106 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
CDK7-207ENST00000510106 CHD1O14646 1710 aa21.45■■□□□ 1.02
CDK7-207ENST00000510106 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
CDK7-207ENST00000510106 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
CDK7-207ENST00000510106 CUL7Q14999 1698 aa21.44■■□□□ 1.02
CDK7-207ENST00000510106 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
CDK7-207ENST00000510106 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
CDK7-207ENST00000510106 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.01
CDK7-207ENST00000510106 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
CDK7-207ENST00000510106 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms