RNA–Protein interactions for RNA: ENST00000577640.1

UBB-205, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-205ENST00000577640 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
UBB-205ENST00000577640 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
UBB-205ENST00000577640 ABCC9O60706 1549 aa23.68■■□□□ 1.38
UBB-205ENST00000577640 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
UBB-205ENST00000577640 NACADO15069 1562 aa22.49■■□□□ 1.19
UBB-205ENST00000577640 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
UBB-205ENST00000577640 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
UBB-205ENST00000577640 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
UBB-205ENST00000577640 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
UBB-205ENST00000577640 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
UBB-205ENST00000577640 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
UBB-205ENST00000577640 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
UBB-205ENST00000577640 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
UBB-205ENST00000577640 SHROOM4Q9ULL8 1493 aa21.75■■□□□ 1.07
UBB-205ENST00000577640 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
UBB-205ENST00000577640 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
UBB-205ENST00000577640 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
UBB-205ENST00000577640 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
UBB-205ENST00000577640 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
UBB-205ENST00000577640 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
UBB-205ENST00000577640 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
UBB-205ENST00000577640 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
UBB-205ENST00000577640 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
UBB-205ENST00000577640 CUX2O14529 1486 aa20.53■□□□□ 0.88
UBB-205ENST00000577640 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
UBB-205ENST00000577640 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
UBB-205ENST00000577640 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
UBB-205ENST00000577640 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
UBB-205ENST00000577640 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
UBB-205ENST00000577640 NESP48681 1621 aa20.33■□□□□ 0.84
UBB-205ENST00000577640 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
UBB-205ENST00000577640 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
UBB-205ENST00000577640 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
UBB-205ENST00000577640 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
UBB-205ENST00000577640 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
UBB-205ENST00000577640 WIZO95785 1651 aa20.09■□□□□ 0.81
UBB-205ENST00000577640 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
UBB-205ENST00000577640 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
UBB-205ENST00000577640 WDR62O43379 1518 aa19.95■□□□□ 0.78
UBB-205ENST00000577640 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
UBB-205ENST00000577640 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
UBB-205ENST00000577640 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
UBB-205ENST00000577640 CFTRP13569 1480 aa19.85■□□□□ 0.77
UBB-205ENST00000577640 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
UBB-205ENST00000577640 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
UBB-205ENST00000577640 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
UBB-205ENST00000577640 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
UBB-205ENST00000577640 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
UBB-205ENST00000577640 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
UBB-205ENST00000577640 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
UBB-205ENST00000577640 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
UBB-205ENST00000577640 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
UBB-205ENST00000577640 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
UBB-205ENST00000577640 ZNF608Q9ULD9 1512 aaPredicted RBP19.4■□□□□ 0.7
UBB-205ENST00000577640 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
UBB-205ENST00000577640 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.69
UBB-205ENST00000577640 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
UBB-205ENST00000577640 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
UBB-205ENST00000577640 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
UBB-205ENST00000577640 CHD1O14646 1710 aa19.25■□□□□ 0.67
UBB-205ENST00000577640 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
UBB-205ENST00000577640 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
UBB-205ENST00000577640 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
UBB-205ENST00000577640 AQRO60306 1485 aaKnown RBP eCLIP19.21■□□□□ 0.673e-9■■□□□ 14.5
UBB-205ENST00000577640 SOGA1O94964 1423 aa19.13■□□□□ 0.65
UBB-205ENST00000577640 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
UBB-205ENST00000577640 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
UBB-205ENST00000577640 CUX1P39880 1505 aa19.09■□□□□ 0.65
UBB-205ENST00000577640 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
UBB-205ENST00000577640 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
UBB-205ENST00000577640 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
UBB-205ENST00000577640 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
UBB-205ENST00000577640 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
UBB-205ENST00000577640 FBLN2P98095 1184 aa19.01■□□□□ 0.63
UBB-205ENST00000577640 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
UBB-205ENST00000577640 GRIN2BQ13224 1484 aa19■□□□□ 0.63
UBB-205ENST00000577640 SYNJ1O43426 1573 aa19■□□□□ 0.63
UBB-205ENST00000577640 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
UBB-205ENST00000577640 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
UBB-205ENST00000577640 ABCA5Q8WWZ7 1642 aa18.93■□□□□ 0.62
UBB-205ENST00000577640 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
UBB-205ENST00000577640 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
UBB-205ENST00000577640 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
UBB-205ENST00000577640 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
UBB-205ENST00000577640 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
UBB-205ENST00000577640 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
UBB-205ENST00000577640 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
UBB-205ENST00000577640 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
UBB-205ENST00000577640 GRIN2AQ12879 1464 aa18.77■□□□□ 0.59
UBB-205ENST00000577640 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
UBB-205ENST00000577640 NUP160Q12769 1436 aa18.72■□□□□ 0.59
UBB-205ENST00000577640 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
UBB-205ENST00000577640 CEP170Q5SW79 1584 aa18.7■□□□□ 0.58
UBB-205ENST00000577640 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
UBB-205ENST00000577640 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
UBB-205ENST00000577640 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
UBB-205ENST00000577640 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
UBB-205ENST00000577640 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
UBB-205ENST00000577640 KIF13AQ9H1H9 1805 aa18.48■□□□□ 0.55
UBB-205ENST00000577640 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms