RNA–Protein interactions for RNA: ENST00000563197.5

INO80E-207, Transcript of INO80 complex subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene INO80E, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-207ENST00000563197 NISCHQ9Y2I1 1504 aa41.47■■■■■ 4.23
INO80E-207ENST00000563197 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
INO80E-207ENST00000563197 ZCCHC6Q5VYS8 1495 aaKnown RBP34.86■■■■□ 3.17
INO80E-207ENST00000563197 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
INO80E-207ENST00000563197 DCAF8L2P0C7V8 631 aa34.23■■■■□ 3.07
INO80E-207ENST00000563197 ABCC9O60706 1549 aa34.05■■■■□ 3.04
INO80E-207ENST00000563197 SHROOM4Q9ULL8 1493 aa33.96■■■■□ 3.03
INO80E-207ENST00000563197 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
INO80E-207ENST00000563197 NACADO15069 1562 aa33.58■■■□□ 2.97
INO80E-207ENST00000563197 RB1CC1Q8TDY2 1594 aa33.27■■■□□ 2.92
INO80E-207ENST00000563197 SCRIBQ14160 1630 aa33.25■■■□□ 2.91
INO80E-207ENST00000563197 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
INO80E-207ENST00000563197 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
INO80E-207ENST00000563197 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
INO80E-207ENST00000563197 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
INO80E-207ENST00000563197 RSF1Q96T23 1441 aaPredicted RBP32.23■■■□□ 2.75
INO80E-207ENST00000563197 PABPN1Q86U42 306 aaKnown RBP eCLIP32.15■■■□□ 2.741e-6■■■□□ 19
INO80E-207ENST00000563197 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
INO80E-207ENST00000563197 BAZ1AQ9NRL2 1556 aaPredicted RBP32■■■□□ 2.71
INO80E-207ENST00000563197 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
INO80E-207ENST00000563197 WIZO95785 1651 aa31.81■■■□□ 2.68
INO80E-207ENST00000563197 TOP2AP11388 1531 aaKnown RBP31.47■■■□□ 2.63
INO80E-207ENST00000563197 PEG3Q9GZU2 1588 aa31.45■■■□□ 2.62
INO80E-207ENST00000563197 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
INO80E-207ENST00000563197 ATAD2BQ9ULI0 1458 aa31.3■■■□□ 2.6
INO80E-207ENST00000563197 EIF4G1Q04637 1599 aaKnown RBP31.29■■■□□ 2.6
INO80E-207ENST00000563197 SMARCA2P51531 1590 aa31.28■■■□□ 2.6
INO80E-207ENST00000563197 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
INO80E-207ENST00000563197 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
INO80E-207ENST00000563197 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
INO80E-207ENST00000563197 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
INO80E-207ENST00000563197 CC2D2AQ9P2K1 1620 aa30.81■■■□□ 2.52
INO80E-207ENST00000563197 TRIM41Q8WV44 630 aa30.74■■■□□ 2.51
INO80E-207ENST00000563197 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
INO80E-207ENST00000563197 CFTRP13569 1480 aa30.35■■■□□ 2.45
INO80E-207ENST00000563197 WRNQ14191 1432 aaPredicted RBP eCLIP30.33■■■□□ 2.45
INO80E-207ENST00000563197 CADPSQ9ULU8 1353 aa30.22■■■□□ 2.43
INO80E-207ENST00000563197 SYNJ1O43426 1573 aa30.21■■■□□ 2.43
INO80E-207ENST00000563197 FAM9AQ8IZU1 332 aaPredicted RBP30.2■■■□□ 2.43
INO80E-207ENST00000563197 PRDM2Q13029 1718 aa30.2■■■□□ 2.43
INO80E-207ENST00000563197 LOC105371045A0A1W2PR82 267 aa30.19■■■□□ 2.42
INO80E-207ENST00000563197 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
INO80E-207ENST00000563197 BIVM-ERCC5R4GMW8 1640 aa30.03■■■□□ 2.4
INO80E-207ENST00000563197 DNAJC5BQ9UF47 199 aa30.02■■■□□ 2.4
INO80E-207ENST00000563197 SOGA1O94964 1423 aa30■■■□□ 2.39
INO80E-207ENST00000563197 CUX1P39880 1505 aa29.97■■■□□ 2.39
INO80E-207ENST00000563197 EEA1Q15075 1411 aa29.94■■■□□ 2.38
INO80E-207ENST00000563197 NESP48681 1621 aa29.94■■■□□ 2.38
INO80E-207ENST00000563197 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
INO80E-207ENST00000563197 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
INO80E-207ENST00000563197 RUSC2Q8N2Y8 1516 aa29.89■■■□□ 2.38
INO80E-207ENST00000563197 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
INO80E-207ENST00000563197 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
INO80E-207ENST00000563197 CEP164Q9UPV0 1460 aa29.69■■■□□ 2.34
INO80E-207ENST00000563197 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
INO80E-207ENST00000563197 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
INO80E-207ENST00000563197 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
INO80E-207ENST00000563197 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
INO80E-207ENST00000563197 KIF21AQ7Z4S6 1674 aa29.57■■■□□ 2.32
INO80E-207ENST00000563197 KIF21BO75037 1637 aa29.56■■■□□ 2.32
INO80E-207ENST00000563197 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
INO80E-207ENST00000563197 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
INO80E-207ENST00000563197 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
INO80E-207ENST00000563197 TNIKQ9UKE5 1360 aa29.48■■■□□ 2.31
INO80E-207ENST00000563197 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
INO80E-207ENST00000563197 CUX2O14529 1486 aa29.45■■■□□ 2.31
INO80E-207ENST00000563197 UBTFP17480 764 aaKnown RBP29.42■■■□□ 2.3
INO80E-207ENST00000563197 RAPGEF2Q9Y4G8 1499 aa29.39■■■□□ 2.29
INO80E-207ENST00000563197 PRXQ9BXM0 1461 aa29.38■■■□□ 2.29
INO80E-207ENST00000563197 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
INO80E-207ENST00000563197 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
INO80E-207ENST00000563197 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
INO80E-207ENST00000563197 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
INO80E-207ENST00000563197 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
INO80E-207ENST00000563197 IGF1RP08069 1367 aa29.27■■■□□ 2.28
INO80E-207ENST00000563197 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
INO80E-207ENST00000563197 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
INO80E-207ENST00000563197 WDR62O43379 1518 aa29.16■■■□□ 2.26
INO80E-207ENST00000563197 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.25
INO80E-207ENST00000563197 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
INO80E-207ENST00000563197 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
INO80E-207ENST00000563197 CLIP1P30622 1438 aa29.09■■■□□ 2.25
INO80E-207ENST00000563197 TDRD9Q8NDG6 1382 aaKnown RBP29.07■■■□□ 2.24
INO80E-207ENST00000563197 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
INO80E-207ENST00000563197 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
INO80E-207ENST00000563197 CUL7Q14999 1698 aa29.03■■■□□ 2.24
INO80E-207ENST00000563197 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
INO80E-207ENST00000563197 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
INO80E-207ENST00000563197 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
INO80E-207ENST00000563197 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
INO80E-207ENST00000563197 PBRM1Q86U86 1689 aa28.87■■■□□ 2.21
INO80E-207ENST00000563197 AQRO60306 1485 aaKnown RBP eCLIP28.87■■■□□ 2.211e-7■■■■■ 40.7
INO80E-207ENST00000563197 VPS8Q8N3P4 1428 aa28.84■■■□□ 2.21
INO80E-207ENST00000563197 ZNF608Q9ULD9 1512 aaPredicted RBP28.83■■■□□ 2.21
INO80E-207ENST00000563197 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
INO80E-207ENST00000563197 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
INO80E-207ENST00000563197 PPARGC1BQ86YN6 1023 aaKnown RBP28.78■■■□□ 2.2
INO80E-207ENST00000563197 ARHGAP35Q9NRY4 1499 aa28.76■■■□□ 2.19
INO80E-207ENST00000563197 CTTNBP2Q8WZ74 1663 aa28.73■■■□□ 2.19
INO80E-207ENST00000563197 EIF4G3O43432 1585 aaKnown RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms