RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	NISCH	Q9Y2I1	1504 aa		40.57	■■■■■ 4.09
INO80E-210	ENST00000567705	CCDC180	Q9P1Z9	1646 aa		36.03	■■■■□ 3.36
INO80E-210	ENST00000567705	ABCC9	O60706	1549 aa		35.17	■■■■□ 3.22
INO80E-210	ENST00000567705	NACAD	O15069	1562 aa		33.87	■■■■□ 3.01
INO80E-210	ENST00000567705	RB1CC1	Q8TDY2	1594 aa		33.85	■■■■□ 3.01
INO80E-210	ENST00000567705	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.83	■■■■□ 3.01
INO80E-210	ENST00000567705	MYO15B	Q96JP2	1530 aa		33.81	■■■■□ 3
INO80E-210	ENST00000567705	DCAF1	Q9Y4B6	1507 aa		33.65	■■■□□ 2.98
INO80E-210	ENST00000567705	DCAF8L2	P0C7V8	631 aa		33.57	■■■□□ 2.96
INO80E-210	ENST00000567705	UNC13A	Q9UPW8	1703 aa		33.11	■■■□□ 2.89
INO80E-210	ENST00000567705	BICRA	Q9NZM4	1560 aa		32.95	■■■□□ 2.86
INO80E-210	ENST00000567705	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.82	■■■□□ 2.84	3e-8	■■□□□ 13.5
INO80E-210	ENST00000567705	SCRIB	Q14160	1630 aa		32.77	■■■□□ 2.84
INO80E-210	ENST00000567705	DNAJC5B	Q9UF47	199 aa		32.71	■■■□□ 2.83
INO80E-210	ENST00000567705	SHROOM4	Q9ULL8	1493 aa		32.61	■■■□□ 2.81
INO80E-210	ENST00000567705	EIF4G1	Q04637	1599 aa	Known RBP	32	■■■□□ 2.71
INO80E-210	ENST00000567705	CC2D2A	Q9P2K1	1620 aa		31.82	■■■□□ 2.69
INO80E-210	ENST00000567705	CECR2	Q9BXF3	1484 aa		31.67	■■■□□ 2.66
INO80E-210	ENST00000567705	SMARCA4	P51532	1647 aa		31.44	■■■□□ 2.62
INO80E-210	ENST00000567705	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.4	■■■□□ 2.62
INO80E-210	ENST00000567705	NCAPD3	P42695	1498 aa		31.31	■■■□□ 2.6
INO80E-210	ENST00000567705	ATAD2B	Q9ULI0	1458 aa		31.29	■■■□□ 2.6
INO80E-210	ENST00000567705	MROH2B	Q7Z745	1585 aa		31.26	■■■□□ 2.59
INO80E-210	ENST00000567705	PEG3	Q9GZU2	1588 aa		31.25	■■■□□ 2.59
INO80E-210	ENST00000567705	SMARCA2	P51531	1590 aa		31.21	■■■□□ 2.59
INO80E-210	ENST00000567705	HMGXB3	Q12766	1538 aa		31.13	■■■□□ 2.57
INO80E-210	ENST00000567705	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.95	■■■□□ 2.54
INO80E-210	ENST00000567705	RSF1	Q96T23	1441 aa	Predicted RBP	30.93	■■■□□ 2.54
INO80E-210	ENST00000567705	WIZ	O95785	1651 aa		30.86	■■■□□ 2.53
INO80E-210	ENST00000567705	TOP2A	P11388	1531 aa	Known RBP	30.57	■■■□□ 2.49
INO80E-210	ENST00000567705	NES	P48681	1621 aa		30.46	■■■□□ 2.47
INO80E-210	ENST00000567705	LAMC3	Q9Y6N6	1575 aa		30.41	■■■□□ 2.46
INO80E-210	ENST00000567705	ERCC6	Q03468	1493 aa		30.35	■■■□□ 2.45
INO80E-210	ENST00000567705	CADPS	Q9ULU8	1353 aa		30.34	■■■□□ 2.45
INO80E-210	ENST00000567705	CCDC88B	A6NC98	1476 aa		30.22	■■■□□ 2.43
INO80E-210	ENST00000567705	CFTR	P13569	1480 aa		30.22	■■■□□ 2.43
INO80E-210	ENST00000567705	CUX2	O14529	1486 aa		30.21	■■■□□ 2.43
INO80E-210	ENST00000567705	PDS5B	Q9NTI5	1447 aa		30.16	■■■□□ 2.42
INO80E-210	ENST00000567705	KIF21A	Q7Z4S6	1674 aa		30.07	■■■□□ 2.4
INO80E-210	ENST00000567705	THOC2	Q8NI27	1593 aa	Known RBP	30.04	■■■□□ 2.4
INO80E-210	ENST00000567705	FANCD2	Q9BXW9	1451 aa		29.95	■■■□□ 2.39
INO80E-210	ENST00000567705	SUPT5H	O00267	1087 aa	Known RBP	29.93	■■■□□ 2.38
INO80E-210	ENST00000567705	PRDM2	Q13029	1718 aa		29.88	■■■□□ 2.37
INO80E-210	ENST00000567705	CEP164	Q9UPV0	1460 aa		29.88	■■■□□ 2.37
INO80E-210	ENST00000567705	MRC2	Q9UBG0	1479 aa		29.87	■■■□□ 2.37
INO80E-210	ENST00000567705	WDR62	O43379	1518 aa		29.82	■■■□□ 2.36
INO80E-210	ENST00000567705	DNAJC5	Q9H3Z4	198 aa		29.81	■■■□□ 2.36
INO80E-210	ENST00000567705	URB2	Q14146	1524 aa	Known RBP	29.71	■■■□□ 2.35
INO80E-210	ENST00000567705	TOPBP1	Q92547	1522 aa		29.5	■■■□□ 2.31
INO80E-210	ENST00000567705	ABCC8	Q09428	1581 aa		29.48	■■■□□ 2.31
INO80E-210	ENST00000567705	DNMBP	Q6XZF7	1577 aa		29.46	■■■□□ 2.31
INO80E-210	ENST00000567705	CUX1	P39880	1505 aa		29.31	■■■□□ 2.28
INO80E-210	ENST00000567705	IFT140	Q96RY7	1462 aa		29.29	■■■□□ 2.28
INO80E-210	ENST00000567705	POLA1	P09884	1462 aa	Predicted RBP	29.27	■■■□□ 2.28
INO80E-210	ENST00000567705	TARBP1	Q13395	1621 aa	Known RBP	29.23	■■■□□ 2.27
INO80E-210	ENST00000567705	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.18	■■■□□ 2.26
INO80E-210	ENST00000567705	FGD5	Q6ZNL6	1462 aa		29.17	■■■□□ 2.26
INO80E-210	ENST00000567705	RAD54L2	Q9Y4B4	1467 aa		29.1	■■■□□ 2.25
INO80E-210	ENST00000567705	SOGA1	O94964	1423 aa		29.09	■■■□□ 2.25
INO80E-210	ENST00000567705	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.09	■■■□□ 2.25
INO80E-210	ENST00000567705	TOP2B	Q02880	1626 aa		29.06	■■■□□ 2.24
INO80E-210	ENST00000567705	BIVM-ERCC5	R4GMW8	1640 aa		29.06	■■■□□ 2.24
INO80E-210	ENST00000567705	SYNJ1	O43426	1573 aa		29.05	■■■□□ 2.24
INO80E-210	ENST00000567705	EIF4G3	O43432	1585 aa	Known RBP	29.04	■■■□□ 2.24
INO80E-210	ENST00000567705	WDR97	A6NE52	1622 aa		28.99	■■■□□ 2.23
INO80E-210	ENST00000567705	AQR	O60306	1485 aa	Known RBP eCLIP	28.98	■■■□□ 2.23	1e-7	■■■■■ 40.7
INO80E-210	ENST00000567705	ABCA10	Q8WWZ4	1543 aa		28.94	■■■□□ 2.22
INO80E-210	ENST00000567705	TDRD9	Q8NDG6	1382 aa	Known RBP	28.92	■■■□□ 2.22
INO80E-210	ENST00000567705	OSCAR	Q8IYS5	282 aa		28.9	■■■□□ 2.22
INO80E-210	ENST00000567705	ABCA5	Q8WWZ7	1642 aa		28.82	■■■□□ 2.2
INO80E-210	ENST00000567705	GRIN2B	Q13224	1484 aa		28.77	■■■□□ 2.2
INO80E-210	ENST00000567705	GAPVD1	Q14C86	1478 aa		28.77	■■■□□ 2.2
INO80E-210	ENST00000567705	SNAPC4	Q5SXM2	1469 aa		28.71	■■■□□ 2.19
INO80E-210	ENST00000567705	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.71	■■■□□ 2.19
INO80E-210	ENST00000567705	PBRM1	Q86U86	1689 aa		28.67	■■■□□ 2.18
INO80E-210	ENST00000567705	CHD1	O14646	1710 aa		28.61	■■■□□ 2.17
INO80E-210	ENST00000567705	TRIM41	Q8WV44	630 aa		28.6	■■■□□ 2.17
INO80E-210	ENST00000567705	SYNJ2	O15056	1496 aa		28.59	■■■□□ 2.17
INO80E-210	ENST00000567705	ERICH3	Q5RHP9	1530 aa		28.58	■■■□□ 2.17
INO80E-210	ENST00000567705	ADAMTS12	P58397	1594 aa		28.5	■■■□□ 2.15
INO80E-210	ENST00000567705	FBLN2	P98095	1184 aa		28.49	■■■□□ 2.15
INO80E-210	ENST00000567705	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.46	■■■□□ 2.15
INO80E-210	ENST00000567705	FHAD1	B1AJZ9	1412 aa		28.45	■■■□□ 2.15
INO80E-210	ENST00000567705	KIF27	Q86VH2	1401 aa		28.45	■■■□□ 2.15
INO80E-210	ENST00000567705	CLASP1	Q7Z460	1538 aa		28.43	■■■□□ 2.14
INO80E-210	ENST00000567705	IGF1R	P08069	1367 aa		28.42	■■■□□ 2.14
INO80E-210	ENST00000567705	RIMBP3C	A6NJZ7	1639 aa		28.42	■■■□□ 2.14
INO80E-210	ENST00000567705	RIMBP3B	A6NNM3	1639 aa		28.42	■■■□□ 2.14
INO80E-210	ENST00000567705	RIMBP3	Q9UFD9	1639 aa		28.42	■■■□□ 2.14
INO80E-210	ENST00000567705	GRIN2A	Q12879	1464 aa		28.41	■■■□□ 2.14
INO80E-210	ENST00000567705	ARHGEF11	O15085	1522 aa		28.4	■■■□□ 2.14
INO80E-210	ENST00000567705	NUP160	Q12769	1436 aa		28.35	■■■□□ 2.13
INO80E-210	ENST00000567705	CEP170	Q5SW79	1584 aa		28.28	■■■□□ 2.12
INO80E-210	ENST00000567705	CUL7	Q14999	1698 aa		28.27	■■■□□ 2.12
INO80E-210	ENST00000567705	RUSC2	Q8N2Y8	1516 aa		28.26	■■■□□ 2.11
INO80E-210	ENST00000567705	CARMIL1	Q5VZK9	1371 aa		28.18	■■■□□ 2.1
INO80E-210	ENST00000567705	CYB5RL	Q6IPT4	315 aa		28.17	■■■□□ 2.1
INO80E-210	ENST00000567705	ARAP1	Q96P48	1450 aa		28.15	■■■□□ 2.1
INO80E-210	ENST00000567705	SHROOM2	Q13796	1616 aa		28.13	■■■□□ 2.09
INO80E-210	ENST00000567705	CHIC1	Q5VXU3	224 aa		28.1	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms