RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 AEBP2Q6ZN18 517 aaPredicted RBP37.72■■■■□ 3.63
CDK7-215ENST00000629350 CHIC1Q5VXU3 224 aa36.83■■■■□ 3.49
CDK7-215ENST00000629350 NISCHQ9Y2I1 1504 aa35.75■■■■□ 3.31
CDK7-215ENST00000629350 PHF23Q9BUL5 403 aaPredicted RBP32.49■■■□□ 2.79
CDK7-215ENST00000629350 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
CDK7-215ENST00000629350 SENP3Q9H4L4 574 aaPredicted RBP31.85■■■□□ 2.69
CDK7-215ENST00000629350 ABCC9O60706 1549 aa31.65■■■□□ 2.66
CDK7-215ENST00000629350 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
CDK7-215ENST00000629350 NACADO15069 1562 aa30.04■■■□□ 2.4
CDK7-215ENST00000629350 PLPPR3Q6T4P5 718 aa29.9■■■□□ 2.38
CDK7-215ENST00000629350 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
CDK7-215ENST00000629350 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
CDK7-215ENST00000629350 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
CDK7-215ENST00000629350 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
CDK7-215ENST00000629350 FOXD1Q16676 465 aa29.65■■■□□ 2.34
CDK7-215ENST00000629350 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
CDK7-215ENST00000629350 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
CDK7-215ENST00000629350 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
CDK7-215ENST00000629350 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
CDK7-215ENST00000629350 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
CDK7-215ENST00000629350 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
CDK7-215ENST00000629350 PPP6R1Q9UPN7 881 aa28.67■■■□□ 2.18
CDK7-215ENST00000629350 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
CDK7-215ENST00000629350 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
CDK7-215ENST00000629350 ADRA2BP18089 450 aa28.64■■■□□ 2.18
CDK7-215ENST00000629350 CECR2Q9BXF3 1484 aa28.41■■■□□ 2.14
CDK7-215ENST00000629350 PIAS4Q8N2W9 510 aaPredicted RBP27.96■■■□□ 2.07
CDK7-215ENST00000629350 SMARCA4P51532 1647 aa27.89■■■□□ 2.05
CDK7-215ENST00000629350 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
CDK7-215ENST00000629350 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
CDK7-215ENST00000629350 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
CDK7-215ENST00000629350 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
CDK7-215ENST00000629350 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
CDK7-215ENST00000629350 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
CDK7-215ENST00000629350 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
CDK7-215ENST00000629350 BAZ1BQ9UIG0 1483 aaKnown RBP27.46■■□□□ 1.99
CDK7-215ENST00000629350 WIZO95785 1651 aa27.36■■□□□ 1.97
CDK7-215ENST00000629350 NESP48681 1621 aa27.36■■□□□ 1.97
CDK7-215ENST00000629350 MSH5O43196 834 aa27.18■■□□□ 1.94
CDK7-215ENST00000629350 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
CDK7-215ENST00000629350 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
CDK7-215ENST00000629350 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
CDK7-215ENST00000629350 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
CDK7-215ENST00000629350 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
CDK7-215ENST00000629350 CUX2O14529 1486 aa27.02■■□□□ 1.92
CDK7-215ENST00000629350 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
CDK7-215ENST00000629350 CADPSQ9ULU8 1353 aa26.85■■□□□ 1.89
CDK7-215ENST00000629350 PDS5BQ9NTI5 1447 aa26.79■■□□□ 1.88
CDK7-215ENST00000629350 CFTRP13569 1480 aa26.69■■□□□ 1.86
CDK7-215ENST00000629350 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
CDK7-215ENST00000629350 WDR62O43379 1518 aa26.65■■□□□ 1.86
CDK7-215ENST00000629350 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
CDK7-215ENST00000629350 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
CDK7-215ENST00000629350 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
CDK7-215ENST00000629350 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
CDK7-215ENST00000629350 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
CDK7-215ENST00000629350 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
CDK7-215ENST00000629350 PPP4R3CPQ6ZMV5 832 aa26.42■■□□□ 1.82
CDK7-215ENST00000629350 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
CDK7-215ENST00000629350 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
CDK7-215ENST00000629350 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
CDK7-215ENST00000629350 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
CDK7-215ENST00000629350 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
CDK7-215ENST00000629350 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
CDK7-215ENST00000629350 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
CDK7-215ENST00000629350 EIF4G3O43432 1585 aaKnown RBP26.02■■□□□ 1.76
CDK7-215ENST00000629350 MAPK8IP2Q13387 824 aaPredicted RBP25.99■■□□□ 1.75
CDK7-215ENST00000629350 KCNA4P22459 653 aa25.97■■□□□ 1.75
CDK7-215ENST00000629350 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
CDK7-215ENST00000629350 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
CDK7-215ENST00000629350 CUX1P39880 1505 aa25.94■■□□□ 1.74
CDK7-215ENST00000629350 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.73
CDK7-215ENST00000629350 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
CDK7-215ENST00000629350 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.732e-6■■■■□ 22
CDK7-215ENST00000629350 CHD1O14646 1710 aa25.81■■□□□ 1.72
CDK7-215ENST00000629350 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
CDK7-215ENST00000629350 SOGA1O94964 1423 aa25.73■■□□□ 1.71
CDK7-215ENST00000629350 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
CDK7-215ENST00000629350 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
CDK7-215ENST00000629350 NCBP3Q53F19 620 aaKnown RBP25.66■■□□□ 1.7
CDK7-215ENST00000629350 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
CDK7-215ENST00000629350 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
CDK7-215ENST00000629350 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
CDK7-215ENST00000629350 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
CDK7-215ENST00000629350 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
CDK7-215ENST00000629350 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
CDK7-215ENST00000629350 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
CDK7-215ENST00000629350 CNKSR2Q8WXI2 1034 aa25.6■■□□□ 1.69
CDK7-215ENST00000629350 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
CDK7-215ENST00000629350 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
CDK7-215ENST00000629350 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
CDK7-215ENST00000629350 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
CDK7-215ENST00000629350 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
CDK7-215ENST00000629350 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
CDK7-215ENST00000629350 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.67
CDK7-215ENST00000629350 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
CDK7-215ENST00000629350 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
CDK7-215ENST00000629350 DMRT2Q9Y5R5 561 aa25.46■■□□□ 1.67
CDK7-215ENST00000629350 CLASP1Q7Z460 1538 aa25.46■■□□□ 1.67
CDK7-215ENST00000629350 FBLN2P98095 1184 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms