RNA–Protein interactions for RNA: ENST00000302182.7

UBB-201, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBB, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-201ENST00000302182 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
UBB-201ENST00000302182 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
UBB-201ENST00000302182 ABCC9O60706 1549 aa34.6■■■■□ 3.13
UBB-201ENST00000302182 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
UBB-201ENST00000302182 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
UBB-201ENST00000302182 NACADO15069 1562 aa32.9■■■□□ 2.86
UBB-201ENST00000302182 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
UBB-201ENST00000302182 ZCCHC6Q5VYS8 1495 aaKnown RBP32.44■■■□□ 2.78
UBB-201ENST00000302182 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
UBB-201ENST00000302182 UNC13AQ9UPW8 1703 aa32.3■■■□□ 2.76
UBB-201ENST00000302182 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
UBB-201ENST00000302182 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
UBB-201ENST00000302182 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
UBB-201ENST00000302182 SCRIBQ14160 1630 aa31.82■■■□□ 2.69
UBB-201ENST00000302182 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
UBB-201ENST00000302182 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
UBB-201ENST00000302182 CC2D2AQ9P2K1 1620 aa31.25■■■□□ 2.59
UBB-201ENST00000302182 CECR2Q9BXF3 1484 aa31.12■■■□□ 2.57
UBB-201ENST00000302182 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
UBB-201ENST00000302182 SMARCA4P51532 1647 aa30.39■■■□□ 2.46
UBB-201ENST00000302182 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
UBB-201ENST00000302182 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
UBB-201ENST00000302182 SMARCA2P51531 1590 aa30.25■■■□□ 2.43
UBB-201ENST00000302182 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
UBB-201ENST00000302182 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
UBB-201ENST00000302182 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
UBB-201ENST00000302182 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
UBB-201ENST00000302182 NESP48681 1621 aa29.84■■■□□ 2.37
UBB-201ENST00000302182 ERCC6Q03468 1493 aa29.82■■■□□ 2.36
UBB-201ENST00000302182 WIZO95785 1651 aa29.78■■■□□ 2.36
UBB-201ENST00000302182 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
UBB-201ENST00000302182 CUX2O14529 1486 aa29.63■■■□□ 2.33
UBB-201ENST00000302182 LAMC3Q9Y6N6 1575 aa29.63■■■□□ 2.33
UBB-201ENST00000302182 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
UBB-201ENST00000302182 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
UBB-201ENST00000302182 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
UBB-201ENST00000302182 THOC2Q8NI27 1593 aaKnown RBP29.4■■■□□ 2.3
UBB-201ENST00000302182 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
UBB-201ENST00000302182 DNAJC5Q9H3Z4 198 aa29.32■■■□□ 2.28
UBB-201ENST00000302182 CFTRP13569 1480 aa29.24■■■□□ 2.27
UBB-201ENST00000302182 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
UBB-201ENST00000302182 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
UBB-201ENST00000302182 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
UBB-201ENST00000302182 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
UBB-201ENST00000302182 WDR62O43379 1518 aa29.09■■■□□ 2.25
UBB-201ENST00000302182 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
UBB-201ENST00000302182 PRDM2Q13029 1718 aa28.89■■■□□ 2.21
UBB-201ENST00000302182 SUPT5HO00267 1087 aaKnown RBP28.65■■■□□ 2.18
UBB-201ENST00000302182 TOPBP1Q92547 1522 aa28.64■■■□□ 2.17
UBB-201ENST00000302182 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
UBB-201ENST00000302182 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
UBB-201ENST00000302182 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
UBB-201ENST00000302182 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
UBB-201ENST00000302182 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
UBB-201ENST00000302182 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
UBB-201ENST00000302182 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
UBB-201ENST00000302182 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
UBB-201ENST00000302182 AQRO60306 1485 aaKnown RBP eCLIP28.32■■■□□ 2.123e-9■■□□□ 14.5
UBB-201ENST00000302182 EIF4G3O43432 1585 aaKnown RBP28.3■■■□□ 2.12
UBB-201ENST00000302182 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
UBB-201ENST00000302182 CUX1P39880 1505 aa28.28■■■□□ 2.12
UBB-201ENST00000302182 SOGA1O94964 1423 aa28.28■■■□□ 2.12
UBB-201ENST00000302182 FGD5Q6ZNL6 1462 aa28.24■■■□□ 2.11
UBB-201ENST00000302182 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
UBB-201ENST00000302182 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
UBB-201ENST00000302182 FBLN2P98095 1184 aa28.07■■■□□ 2.08
UBB-201ENST00000302182 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
UBB-201ENST00000302182 CHD1O14646 1710 aa28.03■■■□□ 2.08
UBB-201ENST00000302182 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
UBB-201ENST00000302182 GRIN2BQ13224 1484 aa27.95■■■□□ 2.07
UBB-201ENST00000302182 RIMBP3CA6NJZ7 1639 aa27.95■■■□□ 2.06
UBB-201ENST00000302182 RIMBP3BA6NNM3 1639 aa27.95■■■□□ 2.06
UBB-201ENST00000302182 RIMBP3Q9UFD9 1639 aa27.95■■■□□ 2.06
UBB-201ENST00000302182 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
UBB-201ENST00000302182 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
UBB-201ENST00000302182 GAPVD1Q14C86 1478 aa27.92■■■□□ 2.06
UBB-201ENST00000302182 CHMP7Q8WUX9 453 aaPredicted RBP27.91■■■□□ 2.06
UBB-201ENST00000302182 MAGI1Q96QZ7 1491 aaPredicted RBP27.9■■■□□ 2.06
UBB-201ENST00000302182 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
UBB-201ENST00000302182 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
UBB-201ENST00000302182 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
UBB-201ENST00000302182 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
UBB-201ENST00000302182 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
UBB-201ENST00000302182 PBRM1Q86U86 1689 aa27.83■■■□□ 2.05
UBB-201ENST00000302182 SYNJ2O15056 1496 aa27.83■■■□□ 2.04
UBB-201ENST00000302182 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
UBB-201ENST00000302182 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
UBB-201ENST00000302182 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
UBB-201ENST00000302182 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
UBB-201ENST00000302182 ADAMTS12P58397 1594 aa27.59■■■□□ 2.01
UBB-201ENST00000302182 ERICH3Q5RHP9 1530 aa27.58■■■□□ 2.01
UBB-201ENST00000302182 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
UBB-201ENST00000302182 NUP160Q12769 1436 aa27.5■■□□□ 1.99
UBB-201ENST00000302182 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
UBB-201ENST00000302182 IGF1RP08069 1367 aa27.39■■□□□ 1.98
UBB-201ENST00000302182 KIF27Q86VH2 1401 aa27.39■■□□□ 1.97
UBB-201ENST00000302182 ERCC6L2Q5T890 1561 aa27.37■■□□□ 1.97
UBB-201ENST00000302182 SHROOM2Q13796 1616 aa27.31■■□□□ 1.96
UBB-201ENST00000302182 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
UBB-201ENST00000302182 JPH4Q96JJ6 628 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms