Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-1A0A0A6YYK1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-1A0A0A6YYK1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-1A0A0A6YYK1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TRAV8-1A0A0A6YYK1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV8-1A0A0A6YYK1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV8-1A0A0A6YYK1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-1A0A0A6YYK1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-1A0A0A6YYK1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-1A0A0A6YYK1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-1A0A0A6YYK1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-1A0A0A6YYK1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-1A0A0A6YYK1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-1A0A0A6YYK1 AL133380.1-201ENST00000506013 324 ntBASIC19.58■□□□□ 0.72
TRAV8-1A0A0A6YYK1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV8-1A0A0A6YYK1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-1A0A0A6YYK1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-1A0A0A6YYK1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV8-1A0A0A6YYK1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-1A0A0A6YYK1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-1A0A0A6YYK1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-1A0A0A6YYK1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-1A0A0A6YYK1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-1A0A0A6YYK1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-1A0A0A6YYK1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-1A0A0A6YYK1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRAV8-1A0A0A6YYK1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-1A0A0A6YYK1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRAV8-1A0A0A6YYK1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV8-1A0A0A6YYK1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRAV8-1A0A0A6YYK1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV8-1A0A0A6YYK1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAV8-1A0A0A6YYK1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV8-1A0A0A6YYK1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-1A0A0A6YYK1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRAV8-1A0A0A6YYK1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRAV8-1A0A0A6YYK1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-1A0A0A6YYK1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-1A0A0A6YYK1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-1A0A0A6YYK1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-1A0A0A6YYK1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV8-1A0A0A6YYK1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAV8-1A0A0A6YYK1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV8-1A0A0A6YYK1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.52■□□□□ 0.71
TRAV8-1A0A0A6YYK1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV8-1A0A0A6YYK1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV8-1A0A0A6YYK1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV8-1A0A0A6YYK1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV8-1A0A0A6YYK1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV8-1A0A0A6YYK1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV8-1A0A0A6YYK1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV8-1A0A0A6YYK1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 BX255925.1-201ENST00000566954 1854 ntBASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-1A0A0A6YYK1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRAV8-1A0A0A6YYK1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-1A0A0A6YYK1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRAV8-1A0A0A6YYK1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-1A0A0A6YYK1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-1A0A0A6YYK1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-1A0A0A6YYK1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-1A0A0A6YYK1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV8-1A0A0A6YYK1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-1A0A0A6YYK1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV8-1A0A0A6YYK1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV8-1A0A0A6YYK1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-1A0A0A6YYK1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRAV8-1A0A0A6YYK1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-1A0A0A6YYK1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-1A0A0A6YYK1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-1A0A0A6YYK1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-1A0A0A6YYK1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-1A0A0A6YYK1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-1A0A0A6YYK1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV8-1A0A0A6YYK1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-1A0A0A6YYK1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-1A0A0A6YYK1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAV8-1A0A0A6YYK1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-1A0A0A6YYK1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV8-1A0A0A6YYK1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-1A0A0A6YYK1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms