Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.365e-7■■■□□ 15.7
SND1Q7KZF4 APP-207ENST00000415997 541 ntTSL 33.75□□□□□ -1.811e-7■■■□□ 15.7
SND1Q7KZF4 FGG-202ENST00000393846 641 ntTSL 28.3□□□□□ -1.084e-34■■■□□ 15.7
SND1Q7KZF4 PCOLCE-205ENST00000472348 960 ntTSL 216.73■□□□□ 0.279e-7■■■□□ 15.7
SND1Q7KZF4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.816e-8■■■□□ 15.7
SND1Q7KZF4 GSTO1-204ENST00000445155 829 ntTSL 222.91■■□□□ 1.268e-9■■■□□ 15.7
SND1Q7KZF4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.37■□□□□ 0.378e-9■■■□□ 15.7
SND1Q7KZF4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.348e-9■■■□□ 15.7
SND1Q7KZF4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.22■□□□□ 0.198e-9■■■□□ 15.7
SND1Q7KZF4 GSTO1-203ENST00000432659 592 ntTSL 26.54□□□□□ -1.368e-9■■■□□ 15.7
SND1Q7KZF4 HEXB-209ENST00000513079 1684 ntTSL 222.64■■□□□ 1.211e-7■■■□□ 15.7
SND1Q7KZF4 HEXB-213ENST00000515528 876 ntTSL 222.26■■□□□ 1.151e-6■■■□□ 15.7
SND1Q7KZF4 UBB-206ENST00000577958 376 ntTSL 215.8■□□□□ 0.124e-46■■■□□ 15.7
SND1Q7KZF4 ASNS-211ENST00000451771 562 ntTSL 219.56■□□□□ 0.721e-34■■■□□ 15.7
SND1Q7KZF4 ASNS-204ENST00000414884 584 ntTSL 219.48■□□□□ 0.711e-34■■■□□ 15.7
SND1Q7KZF4 CADM1-208ENST00000540373 335 ntTSL 28.86□□□□□ -0.994e-9■■■□□ 15.7
SND1Q7KZF4 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC12.95□□□□□ -0.347e-33■■■□□ 15.7
SND1Q7KZF4 KCNN4-203ENST00000598836 1003 ntTSL 518.07■□□□□ 0.482e-6■■■□□ 15.7
SND1Q7KZF4 TGFBI-214ENST00000515433 4661 ntTSL 210.92□□□□□ -0.662e-10■■■□□ 15.7
SND1Q7KZF4 NUCB1-207ENST00000452087 864 ntTSL 319.55■□□□□ 0.722e-8■■■□□ 15.7
SND1Q7KZF4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.283e-8■■■□□ 15.7
SND1Q7KZF4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.033e-8■■■□□ 15.7
SND1Q7KZF4 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC13.77□□□□□ -0.213e-8■■■□□ 15.7
SND1Q7KZF4 PLXNB2-205ENST00000432455 1620 ntTSL 519.05■□□□□ 0.642e-6■■■□□ 15.7
SND1Q7KZF4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.042e-6■■■□□ 15.7
SND1Q7KZF4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.032e-6■■■□□ 15.7
SND1Q7KZF4 PLOD1-209ENST00000491536 639 ntTSL 311.02□□□□□ -0.651e-8■■■□□ 15.7
SND1Q7KZF4 TFPI-206ENST00000420747 685 ntTSL 311.53□□□□□ -0.562e-9■■■□□ 15.7
SND1Q7KZF4 TFPI-205ENST00000417013 554 ntTSL 27.21□□□□□ -1.261e-14■■■□□ 15.7
SND1Q7KZF4 HSD17B12-207ENST00000532178 403 ntTSL 510.12□□□□□ -0.798e-7■■■□□ 15.7
SND1Q7KZF4 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.687e-11■■■□□ 15.7
SND1Q7KZF4 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC12.19□□□□□ -0.467e-11■■■□□ 15.6
SND1Q7KZF4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.85■■□□□ 1.096e-10■■■□□ 15.6
SND1Q7KZF4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.5■□□□□ 0.076e-10■■■□□ 15.6
SND1Q7KZF4 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.626e-10■■■□□ 15.6
SND1Q7KZF4 HDAC4-216ENST00000544989 342 ntTSL 512.25□□□□□ -0.453e-6■■■□□ 15.6
SND1Q7KZF4 SREBF1-214ENST00000486311 473 ntTSL 323.09■■□□□ 1.294e-7■■■□□ 15.6
SND1Q7KZF4 ACSL5-208ENST00000495539 716 ntTSL 25.31□□□□□ -1.565e-7■■■□□ 15.6
SND1Q7KZF4 ESYT1-205ENST00000550179 576 ntTSL 45.75□□□□□ -1.492e-9■■■□□ 15.6
SND1Q7KZF4 PDCD6IP-215ENST00000494810 619 ntTSL 36.34□□□□□ -1.393e-10■■■□□ 15.6
SND1Q7KZF4 PHGDH-212ENST00000641247 710 nt10.07□□□□□ -0.82e-7■■■□□ 15.6
SND1Q7KZF4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.973e-26■■■□□ 15.6
SND1Q7KZF4 COX7B-201ENST00000373335 497 ntTSL 25.57□□□□□ -1.523e-26■■■□□ 15.6
SND1Q7KZF4 MFGE8-214ENST00000560937 801 ntTSL 218.89■□□□□ 0.611e-9■■■□□ 15.6
SND1Q7KZF4 COL9A2-206ENST00000466267 835 ntTSL 519.7■□□□□ 0.744e-7■■■□□ 15.6
SND1Q7KZF4 NFE2L1-219ENST00000584137 529 ntTSL 423.24■■□□□ 1.312e-7■■■□□ 15.6
SND1Q7KZF4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.722e-7■■■□□ 15.6
SND1Q7KZF4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.482e-7■■■□□ 15.6
SND1Q7KZF4 CLSTN1-205ENST00000477264 2169 ntTSL 217.04■□□□□ 0.322e-7■■■□□ 15.6
SND1Q7KZF4 CLSTN1-203ENST00000435891 3829 ntTSL 211.44□□□□□ -0.582e-7■■■□□ 15.6
SND1Q7KZF4 ACSL5-206ENST00000467340 588 ntTSL 28.16□□□□□ -1.17e-7■■■□□ 15.6
SND1Q7KZF4 AC004687.1-201ENST00000579003 1625 ntBASIC23.04■■□□□ 1.283e-7■■■□□ 15.6
SND1Q7KZF4 WDR13-205ENST00000472440 430 ntTSL 221.62■■□□□ 1.053e-7■■■□□ 15.6
SND1Q7KZF4 WDR13-208ENST00000486125 936 ntTSL 221.07■□□□□ 0.963e-7■■■□□ 15.6
SND1Q7KZF4 WDR13-212ENST00000498631 859 ntTSL 221.07■□□□□ 0.963e-7■■■□□ 15.6
SND1Q7KZF4 WDR13-209ENST00000492715 2612 ntTSL 518.76■□□□□ 0.593e-7■■■□□ 15.6
SND1Q7KZF4 RFK-204ENST00000479197 1501 ntTSL 1 (best)18.69■□□□□ 0.583e-7■■■□□ 15.6
SND1Q7KZF4 RFK-202ENST00000472900 753 ntTSL 318.13■□□□□ 0.493e-7■■■□□ 15.6
SND1Q7KZF4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.423e-7■■■□□ 15.6
SND1Q7KZF4 WDR13-204ENST00000470124 437 ntTSL 316.74■□□□□ 0.273e-7■■■□□ 15.6
SND1Q7KZF4 STC2-203ENST00000519511 582 ntTSL 216.42■□□□□ 0.223e-7■■■□□ 15.6
SND1Q7KZF4 SARS-205ENST00000477544 694 ntTSL 210.72□□□□□ -0.694e-7■■■□□ 15.6
SND1Q7KZF4 RFK-206ENST00000490113 2386 ntTSL 210.31□□□□□ -0.763e-7■■■□□ 15.6
SND1Q7KZF4 MIR142-201ENST00000384835 87 ntBASIC8.3□□□□□ -1.083e-7■■■□□ 15.6
SND1Q7KZF4 FN1-220ENST00000480024 576 ntTSL 26.87□□□□□ -1.313e-7■■■□□ 15.6
SND1Q7KZF4 ADAM10-210ENST00000482945 2333 ntTSL 26.88□□□□□ -1.312e-7■■■□□ 15.6
SND1Q7KZF4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.565e-9■■■□□ 15.6
SND1Q7KZF4 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)18.08■□□□□ 0.485e-9■■■□□ 15.6
SND1Q7KZF4 LAMB2-203ENST00000462930 536 ntTSL 215.17■□□□□ 0.021e-8■■■□□ 15.6
SND1Q7KZF4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.692e-7■■■□□ 15.6
SND1Q7KZF4 JAG1-202ENST00000423891 3758 ntTSL 27.88□□□□□ -1.152e-7■■■□□ 15.6
SND1Q7KZF4 LAPTM4B-202ENST00000517924 618 ntTSL 525.38■■□□□ 1.656e-7■■■□□ 15.6
SND1Q7KZF4 CRLF1-205ENST00000597131 520 ntTSL 223.63■■□□□ 1.372e-13■■■□□ 15.6
SND1Q7KZF4 CTBP2-206ENST00000460976 603 ntTSL 527.18■■□□□ 1.948e-6■■■□□ 15.6
SND1Q7KZF4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.758e-6■■■□□ 15.6
SND1Q7KZF4 CTBP2-207ENST00000467395 410 ntTSL 325.66■■□□□ 1.78e-6■■■□□ 15.6
SND1Q7KZF4 MAPRE2-213ENST00000591734 803 ntTSL 223.43■■□□□ 1.341e-7■■■□□ 15.6
SND1Q7KZF4 ALG1-208ENST00000592793 569 ntTSL 223.02■■□□□ 1.281e-7■■■□□ 15.6
SND1Q7KZF4 CTBP2-208ENST00000476817 705 ntTSL 321.51■■□□□ 1.038e-6■■■□□ 15.6
SND1Q7KZF4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.978e-6■■■□□ 15.6
SND1Q7KZF4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.842e-7■■■□□ 15.6
SND1Q7KZF4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.838e-6■■■□□ 15.6
SND1Q7KZF4 DGCR2-203ENST00000467659 2459 ntTSL 519.11■□□□□ 0.651e-7■■■□□ 15.6
SND1Q7KZF4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.59■□□□□ 0.572e-7■■■□□ 15.6
SND1Q7KZF4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.531e-7■■■□□ 15.6
SND1Q7KZF4 PMPCB-206ENST00000456433 904 ntTSL 517.75■□□□□ 0.431e-7■■■□□ 15.6
SND1Q7KZF4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.41■□□□□ 0.381e-7■■■□□ 15.6
SND1Q7KZF4 ANXA2-229ENST00000560165 718 ntTSL 317.33■□□□□ 0.361e-7■■■□□ 15.6
SND1Q7KZF4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.331e-7■■■□□ 15.6
SND1Q7KZF4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.67■□□□□ 0.262e-7■■■□□ 15.6
SND1Q7KZF4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.262e-7■■■□□ 15.6
SND1Q7KZF4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.22■□□□□ 0.191e-7■■■□□ 15.6
SND1Q7KZF4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.94■□□□□ 0.141e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.131e-7■■■□□ 15.6
SND1Q7KZF4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.11e-7■■■□□ 15.6
SND1Q7KZF4 CTSA-216ENST00000607212 590 ntTSL 415.38■□□□□ 0.052e-11■■■□□ 15.6
SND1Q7KZF4 MRPL2-209ENST00000491898 1020 ntTSL 214.94□□□□□ -0.022e-7■■■□□ 15.6
SND1Q7KZF4 CTSA-211ENST00000606066 603 ntTSL 514.85□□□□□ -0.031e-7■■■□□ 15.6
SND1Q7KZF4 MRPL2-205ENST00000480286 661 ntTSL 214.63□□□□□ -0.072e-7■■■□□ 15.6
SND1Q7KZF4 MRPL13-202ENST00000518696 1418 ntTSL 1 (best)12.89□□□□□ -0.352e-7■■■□□ 15.6
Retrieved 100 of 13,567 protein–RNA pairs in 268.3 ms