RNA–Protein interactions for RNA: ENST00000626989.2

PSEN2-211, Transcript of presenilin 2, humanhuman

TSL 5 BASIC

Gene PSEN2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-211ENST00000626989 NISCHQ9Y2I1 1504 aa37.54■■■■□ 3.6
PSEN2-211ENST00000626989 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.83
PSEN2-211ENST00000626989 ZCCHC6Q5VYS8 1495 aaKnown RBP31.58■■■□□ 2.65
PSEN2-211ENST00000626989 DCAF1Q9Y4B6 1507 aa31.06■■■□□ 2.56
PSEN2-211ENST00000626989 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
PSEN2-211ENST00000626989 ABCC9O60706 1549 aa30.74■■■□□ 2.51
PSEN2-211ENST00000626989 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
PSEN2-211ENST00000626989 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.49
PSEN2-211ENST00000626989 NACADO15069 1562 aa30.38■■■□□ 2.45
PSEN2-211ENST00000626989 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
PSEN2-211ENST00000626989 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
PSEN2-211ENST00000626989 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
PSEN2-211ENST00000626989 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
PSEN2-211ENST00000626989 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
PSEN2-211ENST00000626989 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
PSEN2-211ENST00000626989 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
PSEN2-211ENST00000626989 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
PSEN2-211ENST00000626989 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
PSEN2-211ENST00000626989 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
PSEN2-211ENST00000626989 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
PSEN2-211ENST00000626989 WIZO95785 1651 aa28.8■■■□□ 2.2
PSEN2-211ENST00000626989 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.16
PSEN2-211ENST00000626989 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
PSEN2-211ENST00000626989 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
PSEN2-211ENST00000626989 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
PSEN2-211ENST00000626989 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
PSEN2-211ENST00000626989 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
PSEN2-211ENST00000626989 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
PSEN2-211ENST00000626989 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
PSEN2-211ENST00000626989 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
PSEN2-211ENST00000626989 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
PSEN2-211ENST00000626989 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
PSEN2-211ENST00000626989 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
PSEN2-211ENST00000626989 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
PSEN2-211ENST00000626989 CFTRP13569 1480 aa27.47■■□□□ 1.99
PSEN2-211ENST00000626989 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
PSEN2-211ENST00000626989 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
PSEN2-211ENST00000626989 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
PSEN2-211ENST00000626989 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
PSEN2-211ENST00000626989 LOC105371045A0A1W2PR82 267 aa27.28■■□□□ 1.96
PSEN2-211ENST00000626989 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
PSEN2-211ENST00000626989 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
PSEN2-211ENST00000626989 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
PSEN2-211ENST00000626989 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
PSEN2-211ENST00000626989 SOGA1O94964 1423 aa27.14■■□□□ 1.94
PSEN2-211ENST00000626989 CUX1P39880 1505 aa27.13■■□□□ 1.93
PSEN2-211ENST00000626989 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.92
PSEN2-211ENST00000626989 NESP48681 1621 aa27.07■■□□□ 1.92
PSEN2-211ENST00000626989 EEA1Q15075 1411 aa27.07■■□□□ 1.92
PSEN2-211ENST00000626989 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
PSEN2-211ENST00000626989 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
PSEN2-211ENST00000626989 CSRNP3Q8WYN3 585 aa26.89■■□□□ 1.9
PSEN2-211ENST00000626989 DNMBPQ6XZF7 1577 aa26.83■■□□□ 1.88
PSEN2-211ENST00000626989 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
PSEN2-211ENST00000626989 EHMT2Q96KQ7 1210 aa26.81■■□□□ 1.88
PSEN2-211ENST00000626989 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
PSEN2-211ENST00000626989 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
PSEN2-211ENST00000626989 KIF21BO75037 1637 aa26.77■■□□□ 1.88
PSEN2-211ENST00000626989 KIF21AQ7Z4S6 1674 aa26.77■■□□□ 1.88
PSEN2-211ENST00000626989 TOPBP1Q92547 1522 aa26.77■■□□□ 1.88
PSEN2-211ENST00000626989 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
PSEN2-211ENST00000626989 GOLGA3Q08378 1498 aa26.71■■□□□ 1.87
PSEN2-211ENST00000626989 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
PSEN2-211ENST00000626989 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
PSEN2-211ENST00000626989 POLA1P09884 1462 aaPredicted RBP26.65■■□□□ 1.86
PSEN2-211ENST00000626989 CUX2O14529 1486 aa26.61■■□□□ 1.85
PSEN2-211ENST00000626989 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
PSEN2-211ENST00000626989 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
PSEN2-211ENST00000626989 ERICH3Q5RHP9 1530 aa26.56■■□□□ 1.84
PSEN2-211ENST00000626989 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
PSEN2-211ENST00000626989 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
PSEN2-211ENST00000626989 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
PSEN2-211ENST00000626989 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
PSEN2-211ENST00000626989 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
PSEN2-211ENST00000626989 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
PSEN2-211ENST00000626989 IGF1RP08069 1367 aa26.48■■□□□ 1.83
PSEN2-211ENST00000626989 TARBP1Q13395 1621 aaKnown RBP26.4■■□□□ 1.82
PSEN2-211ENST00000626989 WDR62O43379 1518 aa26.38■■□□□ 1.81
PSEN2-211ENST00000626989 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
PSEN2-211ENST00000626989 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
PSEN2-211ENST00000626989 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
PSEN2-211ENST00000626989 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
PSEN2-211ENST00000626989 CLIP1P30622 1438 aa26.28■■□□□ 1.8
PSEN2-211ENST00000626989 CUL7Q14999 1698 aa26.28■■□□□ 1.8
PSEN2-211ENST00000626989 TDRD9Q8NDG6 1382 aaKnown RBP26.25■■□□□ 1.79
PSEN2-211ENST00000626989 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
PSEN2-211ENST00000626989 IFT140Q96RY7 1462 aa26.18■■□□□ 1.78
PSEN2-211ENST00000626989 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
PSEN2-211ENST00000626989 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
PSEN2-211ENST00000626989 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
PSEN2-211ENST00000626989 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
PSEN2-211ENST00000626989 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.77
PSEN2-211ENST00000626989 ARAP1Q96P48 1450 aa26.07■■□□□ 1.76
PSEN2-211ENST00000626989 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
PSEN2-211ENST00000626989 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
PSEN2-211ENST00000626989 CTTNBP2Q8WZ74 1663 aa26.03■■□□□ 1.76
PSEN2-211ENST00000626989 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
PSEN2-211ENST00000626989 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
PSEN2-211ENST00000626989 ADAMTS12P58397 1594 aa26■■□□□ 1.75
PSEN2-211ENST00000626989 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms