RNA–Protein interactions for RNA: ENST00000422240.6

PSEN2-203, Transcript of presenilin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PSEN2, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-203ENST00000422240 NISCHQ9Y2I1 1504 aa36.48■■■■□ 3.43
PSEN2-203ENST00000422240 CCDC180Q9P1Z9 1646 aa31.68■■■□□ 2.66
PSEN2-203ENST00000422240 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
PSEN2-203ENST00000422240 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
PSEN2-203ENST00000422240 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
PSEN2-203ENST00000422240 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
PSEN2-203ENST00000422240 ABCC9O60706 1549 aa29.94■■■□□ 2.38
PSEN2-203ENST00000422240 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
PSEN2-203ENST00000422240 NACADO15069 1562 aa29.46■■■□□ 2.31
PSEN2-203ENST00000422240 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
PSEN2-203ENST00000422240 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
PSEN2-203ENST00000422240 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
PSEN2-203ENST00000422240 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
PSEN2-203ENST00000422240 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
PSEN2-203ENST00000422240 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
PSEN2-203ENST00000422240 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.13
PSEN2-203ENST00000422240 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
PSEN2-203ENST00000422240 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
PSEN2-203ENST00000422240 BAZ1AQ9NRL2 1556 aaPredicted RBP28.12■■■□□ 2.09
PSEN2-203ENST00000422240 WIZO95785 1651 aa28.05■■■□□ 2.08
PSEN2-203ENST00000422240 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
PSEN2-203ENST00000422240 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
PSEN2-203ENST00000422240 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
PSEN2-203ENST00000422240 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
PSEN2-203ENST00000422240 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
PSEN2-203ENST00000422240 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
PSEN2-203ENST00000422240 SMARCA2P51531 1590 aa27.47■■□□□ 1.99
PSEN2-203ENST00000422240 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.98
PSEN2-203ENST00000422240 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
PSEN2-203ENST00000422240 NCAPD3P42695 1498 aa27.2■■□□□ 1.94
PSEN2-203ENST00000422240 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
PSEN2-203ENST00000422240 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
PSEN2-203ENST00000422240 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
PSEN2-203ENST00000422240 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
PSEN2-203ENST00000422240 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
PSEN2-203ENST00000422240 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
PSEN2-203ENST00000422240 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.87
PSEN2-203ENST00000422240 CFTRP13569 1480 aa26.66■■□□□ 1.86
PSEN2-203ENST00000422240 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
PSEN2-203ENST00000422240 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
PSEN2-203ENST00000422240 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
PSEN2-203ENST00000422240 SOGA1O94964 1423 aa26.49■■□□□ 1.83
PSEN2-203ENST00000422240 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
PSEN2-203ENST00000422240 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
PSEN2-203ENST00000422240 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
PSEN2-203ENST00000422240 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
PSEN2-203ENST00000422240 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
PSEN2-203ENST00000422240 CUX1P39880 1505 aa26.4■■□□□ 1.82
PSEN2-203ENST00000422240 NESP48681 1621 aa26.36■■□□□ 1.81
PSEN2-203ENST00000422240 EEA1Q15075 1411 aa26.33■■□□□ 1.81
PSEN2-203ENST00000422240 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
PSEN2-203ENST00000422240 CSRNP3Q8WYN3 585 aa26.25■■□□□ 1.79
PSEN2-203ENST00000422240 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
PSEN2-203ENST00000422240 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
PSEN2-203ENST00000422240 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
PSEN2-203ENST00000422240 DNMBPQ6XZF7 1577 aa26.06■■□□□ 1.76
PSEN2-203ENST00000422240 GOLGA3Q08378 1498 aa26.05■■□□□ 1.76
PSEN2-203ENST00000422240 KIF21BO75037 1637 aa26.05■■□□□ 1.76
PSEN2-203ENST00000422240 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
PSEN2-203ENST00000422240 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
PSEN2-203ENST00000422240 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
PSEN2-203ENST00000422240 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
PSEN2-203ENST00000422240 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
PSEN2-203ENST00000422240 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
PSEN2-203ENST00000422240 UBTFP17480 764 aaKnown RBP25.96■■□□□ 1.75
PSEN2-203ENST00000422240 CUX2O14529 1486 aa25.94■■□□□ 1.74
PSEN2-203ENST00000422240 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
PSEN2-203ENST00000422240 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
PSEN2-203ENST00000422240 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
PSEN2-203ENST00000422240 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
PSEN2-203ENST00000422240 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
PSEN2-203ENST00000422240 ERICH3Q5RHP9 1530 aa25.82■■□□□ 1.72
PSEN2-203ENST00000422240 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
PSEN2-203ENST00000422240 IGF1RP08069 1367 aa25.77■■□□□ 1.72
PSEN2-203ENST00000422240 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
PSEN2-203ENST00000422240 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
PSEN2-203ENST00000422240 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
PSEN2-203ENST00000422240 CLIP1P30622 1438 aa25.66■■□□□ 1.7
PSEN2-203ENST00000422240 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.7
PSEN2-203ENST00000422240 TARBP1Q13395 1621 aaKnown RBP25.62■■□□□ 1.69
PSEN2-203ENST00000422240 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
PSEN2-203ENST00000422240 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
PSEN2-203ENST00000422240 RANGAP1P46060 587 aaPredicted RBP25.6■■□□□ 1.69
PSEN2-203ENST00000422240 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
PSEN2-203ENST00000422240 WDR62O43379 1518 aa25.58■■□□□ 1.69
PSEN2-203ENST00000422240 TRIM26Q12899 539 aaPredicted RBP25.56■■□□□ 1.68
PSEN2-203ENST00000422240 PPARGC1BQ86YN6 1023 aaKnown RBP25.56■■□□□ 1.68
PSEN2-203ENST00000422240 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
PSEN2-203ENST00000422240 CUL7Q14999 1698 aa25.52■■□□□ 1.68
PSEN2-203ENST00000422240 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
PSEN2-203ENST00000422240 VPS8Q8N3P4 1428 aa25.44■■□□□ 1.66
PSEN2-203ENST00000422240 ARAP1Q96P48 1450 aa25.43■■□□□ 1.66
PSEN2-203ENST00000422240 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
PSEN2-203ENST00000422240 PBRM1Q86U86 1689 aa25.41■■□□□ 1.66
PSEN2-203ENST00000422240 AQRO60306 1485 aaKnown RBP eCLIP25.41■■□□□ 1.66
PSEN2-203ENST00000422240 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
PSEN2-203ENST00000422240 ARHGAP35Q9NRY4 1499 aa25.37■■□□□ 1.65
PSEN2-203ENST00000422240 TTBK1Q5TCY1 1321 aaPredicted RBP25.33■■□□□ 1.65
PSEN2-203ENST00000422240 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
PSEN2-203ENST00000422240 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms