RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
APP-207ENST00000415997 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
APP-207ENST00000415997 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
APP-207ENST00000415997 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
APP-207ENST00000415997 FOXD1Q16676 465 aa13.14□□□□□ -0.31
APP-207ENST00000415997 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
APP-207ENST00000415997 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
APP-207ENST00000415997 MSH5O43196 834 aa12.29□□□□□ -0.44
APP-207ENST00000415997 ADRA2BP18089 450 aa12.26□□□□□ -0.45
APP-207ENST00000415997 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
APP-207ENST00000415997 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
APP-207ENST00000415997 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
APP-207ENST00000415997 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
APP-207ENST00000415997 DMRT2Q9Y5R5 561 aa11.13□□□□□ -0.63
APP-207ENST00000415997 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
APP-207ENST00000415997 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
APP-207ENST00000415997 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
APP-207ENST00000415997 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
APP-207ENST00000415997 CACNB1Q02641 598 aaPredicted RBP10.67□□□□□ -0.7
APP-207ENST00000415997 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
APP-207ENST00000415997 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
APP-207ENST00000415997 RNF39Q9H2S5 420 aa10.47□□□□□ -0.73
APP-207ENST00000415997 NPM3O75607 178 aaKnown RBP10.33□□□□□ -0.76
APP-207ENST00000415997 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
APP-207ENST00000415997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.762e-8■■□□□ 12
APP-207ENST00000415997 DNAJC5BQ9UF47 199 aa10.22□□□□□ -0.77
APP-207ENST00000415997 KCNA4P22459 653 aa10.11□□□□□ -0.79
APP-207ENST00000415997 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
APP-207ENST00000415997 CAPN15O75808 1086 aa9.95□□□□□ -0.82
APP-207ENST00000415997 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
APP-207ENST00000415997 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
APP-207ENST00000415997 DSG3P32926 999 aa9.81□□□□□ -0.84
APP-207ENST00000415997 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
APP-207ENST00000415997 ABCB7O75027 752 aa9.72□□□□□ -0.85
APP-207ENST00000415997 APLP2Q06481 763 aa9.71□□□□□ -0.86
APP-207ENST00000415997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.69□□□□□ -0.86
APP-207ENST00000415997 HNRNPUL2Q1KMD3 747 aaKnown RBP9.69□□□□□ -0.86
APP-207ENST00000415997 ZNF219Q9P2Y4 722 aaPredicted RBP9.67□□□□□ -0.86
APP-207ENST00000415997 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
APP-207ENST00000415997 SLC4A1APQ9BWU0 796 aaKnown RBP9.55□□□□□ -0.88
APP-207ENST00000415997 MYCNP04198 464 aaPredicted RBP9.54□□□□□ -0.88
APP-207ENST00000415997 POTEHQ6S545 545 aa9.5□□□□□ -0.89
APP-207ENST00000415997 POLA2Q14181 598 aa9.47□□□□□ -0.89
APP-207ENST00000415997 FOXD4L1Q9NU39 408 aa9.42□□□□□ -0.9
APP-207ENST00000415997 ATF5Q9Y2D1 282 aaPredicted RBP9.37□□□□□ -0.91
APP-207ENST00000415997 RBM42Q9BTD8 480 aaKnown RBP9.36□□□□□ -0.91
APP-207ENST00000415997 ZBTB22O15209 634 aa9.27□□□□□ -0.93
APP-207ENST00000415997 CHRDL2Q6WN34 429 aa9.2□□□□□ -0.94
APP-207ENST00000415997 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
APP-207ENST00000415997 OSCARQ8IYS5 282 aa9.16□□□□□ -0.94
APP-207ENST00000415997 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
APP-207ENST00000415997 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
APP-207ENST00000415997 REM2Q8IYK8 340 aaPredicted RBP9.08□□□□□ -0.96
APP-207ENST00000415997 FBLN2P98095 1184 aa9.01□□□□□ -0.97
APP-207ENST00000415997 PITPNM1O00562 1244 aa8.98□□□□□ -0.97
APP-207ENST00000415997 PIP4P2Q8N4L2 257 aa8.97□□□□□ -0.97
APP-207ENST00000415997 SPDYE2BA6NHP3 402 aa8.91□□□□□ -0.98
APP-207ENST00000415997 SPDYE6P0CI01 402 aa8.91□□□□□ -0.98
APP-207ENST00000415997 SPDYE2Q495Y8 402 aa8.91□□□□□ -0.98
APP-207ENST00000415997 HAX1O00165 279 aa8.9□□□□□ -0.98
APP-207ENST00000415997 MKRN4PQ13434 485 aaPredicted RBP8.9□□□□□ -0.98
APP-207ENST00000415997 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
APP-207ENST00000415997 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
APP-207ENST00000415997 SP7Q8TDD2 431 aaPredicted RBP8.87□□□□□ -0.99
APP-207ENST00000415997 FXR2P51116 673 aaKnown RBP eCLIP8.86□□□□□ -0.994e-13■■□□□ 11.5
APP-207ENST00000415997 SPDYE1Q8NFV5 336 aaPredicted RBP8.8□□□□□ -1
APP-207ENST00000415997 CSRNP3Q8WYN3 585 aa8.8□□□□□ -1
APP-207ENST00000415997 PRKAR2AP13861 404 aaKnown RBP8.78□□□□□ -1
APP-207ENST00000415997 EHMT2Q96KQ7 1210 aa8.77□□□□□ -1.01
APP-207ENST00000415997 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
APP-207ENST00000415997 EVX2Q03828 476 aa8.74□□□□□ -1.01
APP-207ENST00000415997 PABPN1Q86U42 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
APP-207ENST00000415997 CHADLQ6NUI6 762 aa8.7□□□□□ -1.02
APP-207ENST00000415997 PRR29P0C7W0 189 aa8.69□□□□□ -1.02
APP-207ENST00000415997 C19orf67A6NJJ6 358 aa8.59□□□□□ -1.03
APP-207ENST00000415997 GABBR2O75899 941 aa8.53□□□□□ -1.04
APP-207ENST00000415997 FARP1Q9Y4F1 1045 aaPredicted RBP8.51□□□□□ -1.05
APP-207ENST00000415997 SPDYE4A6NLX3 237 aa8.49□□□□□ -1.05
APP-207ENST00000415997 CD44P16070 742 aaKnown RBP8.49□□□□□ -1.05
APP-207ENST00000415997 STAG3Q9UJ98 1225 aa8.44□□□□□ -1.06
APP-207ENST00000415997 CREBZFQ9NS37 354 aa8.41□□□□□ -1.06
APP-207ENST00000415997 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
APP-207ENST00000415997 LHX8Q68G74 356 aa8.35□□□□□ -1.07
APP-207ENST00000415997 DCBLD2Q96PD2 775 aa8.33□□□□□ -1.08
APP-207ENST00000415997 POTEIP0CG38 1075 aa8.32□□□□□ -1.08
APP-207ENST00000415997 PAK3O75914 559 aaPredicted RBP8.3□□□□□ -1.08
APP-207ENST00000415997 ZNF579Q8NAF0 562 aaKnown RBP8.29□□□□□ -1.08
APP-207ENST00000415997 NPM1P06748 294 aaKnown RBP eCLIP8.28□□□□□ -1.08
APP-207ENST00000415997 CLCN6P51797 869 aa8.28□□□□□ -1.08
APP-207ENST00000415997 PHF12Q96QT6 1004 aa8.26□□□□□ -1.09
APP-207ENST00000415997 GALR2O43603 387 aaPredicted RBP8.25□□□□□ -1.09
APP-207ENST00000415997 NISCHQ9Y2I1 1504 aa8.24□□□□□ -1.09
APP-207ENST00000415997 MNX1P50219 401 aaPredicted RBP8.21□□□□□ -1.1
APP-207ENST00000415997 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
APP-207ENST00000415997 MIER1Q8N108 512 aa8.17□□□□□ -1.1
APP-207ENST00000415997 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
APP-207ENST00000415997 PROM2Q8N271 834 aa8.14□□□□□ -1.11
APP-207ENST00000415997 ABCC9O60706 1549 aa8.13□□□□□ -1.11
APP-207ENST00000415997 MS4A3Q96HJ5 214 aa8.12□□□□□ -1.11
APP-207ENST00000415997 PELP1Q8IZL8 1130 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms