RNA–Protein interactions for RNA: ENST00000452087.5

NUCB1-207, Transcript of nucleobindin 1, humanhuman

TSL 3

Gene NUCB1, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-207ENST00000452087 NISCHQ9Y2I1 1504 aa46.18■■■■■ 4.98
NUCB1-207ENST00000452087 CCDC180Q9P1Z9 1646 aa41.36■■■■■ 4.21
NUCB1-207ENST00000452087 ABCC9O60706 1549 aa40.5■■■■■ 4.07
NUCB1-207ENST00000452087 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
NUCB1-207ENST00000452087 NACADO15069 1562 aa38.87■■■■□ 3.81
NUCB1-207ENST00000452087 DCAF8L2P0C7V8 631 aa38.59■■■■□ 3.77
NUCB1-207ENST00000452087 MYO15BQ96JP2 1530 aa38.55■■■■□ 3.76
NUCB1-207ENST00000452087 ZCCHC6Q5VYS8 1495 aaKnown RBP38.44■■■■□ 3.74
NUCB1-207ENST00000452087 DCAF1Q9Y4B6 1507 aa38.27■■■■□ 3.72
NUCB1-207ENST00000452087 UNC13AQ9UPW8 1703 aa38.1■■■■□ 3.69
NUCB1-207ENST00000452087 PABPN1Q86U42 306 aaKnown RBP eCLIP37.7■■■■□ 3.63
NUCB1-207ENST00000452087 BICRAQ9NZM4 1560 aa37.69■■■■□ 3.62
NUCB1-207ENST00000452087 SCRIBQ14160 1630 aa37.59■■■■□ 3.61
NUCB1-207ENST00000452087 SHROOM4Q9ULL8 1493 aa37.46■■■■□ 3.59
NUCB1-207ENST00000452087 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
NUCB1-207ENST00000452087 EIF4G1Q04637 1599 aaKnown RBP36.78■■■■□ 3.48
NUCB1-207ENST00000452087 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
NUCB1-207ENST00000452087 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
NUCB1-207ENST00000452087 SMARCA4P51532 1647 aa35.95■■■■□ 3.35
NUCB1-207ENST00000452087 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
NUCB1-207ENST00000452087 SMARCA2P51531 1590 aa35.81■■■■□ 3.32
NUCB1-207ENST00000452087 NCAPD3P42695 1498 aa35.77■■■■□ 3.32
NUCB1-207ENST00000452087 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
NUCB1-207ENST00000452087 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
NUCB1-207ENST00000452087 PEG3Q9GZU2 1588 aa35.6■■■■□ 3.29
NUCB1-207ENST00000452087 MROH2BQ7Z745 1585 aa35.54■■■■□ 3.28
NUCB1-207ENST00000452087 BAZ1BQ9UIG0 1483 aaKnown RBP35.51■■■■□ 3.28
NUCB1-207ENST00000452087 WIZO95785 1651 aa35.2■■■■□ 3.23
NUCB1-207ENST00000452087 RSF1Q96T23 1441 aaPredicted RBP35.03■■■■□ 3.2
NUCB1-207ENST00000452087 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
NUCB1-207ENST00000452087 LAMC3Q9Y6N6 1575 aa34.98■■■■□ 3.19
NUCB1-207ENST00000452087 NESP48681 1621 aa34.93■■■■□ 3.18
NUCB1-207ENST00000452087 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
NUCB1-207ENST00000452087 CUX2O14529 1486 aa34.77■■■■□ 3.16
NUCB1-207ENST00000452087 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
NUCB1-207ENST00000452087 PDS5BQ9NTI5 1447 aa34.7■■■■□ 3.15
NUCB1-207ENST00000452087 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
NUCB1-207ENST00000452087 THOC2Q8NI27 1593 aaKnown RBP34.59■■■■□ 3.13
NUCB1-207ENST00000452087 CFTRP13569 1480 aa34.46■■■■□ 3.11
NUCB1-207ENST00000452087 PRDM2Q13029 1718 aa34.4■■■■□ 3.1
NUCB1-207ENST00000452087 CEP164Q9UPV0 1460 aa34.38■■■■□ 3.09
NUCB1-207ENST00000452087 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
NUCB1-207ENST00000452087 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
NUCB1-207ENST00000452087 FANCD2Q9BXW9 1451 aa34.34■■■■□ 3.09
NUCB1-207ENST00000452087 WDR62O43379 1518 aa34.26■■■■□ 3.08
NUCB1-207ENST00000452087 URB2Q14146 1524 aaKnown RBP33.98■■■■□ 3.03
NUCB1-207ENST00000452087 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
NUCB1-207ENST00000452087 DNAJC5Q9H3Z4 198 aa33.84■■■■□ 3.01
NUCB1-207ENST00000452087 ABCC8Q09428 1581 aa33.84■■■■□ 3.01
NUCB1-207ENST00000452087 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
NUCB1-207ENST00000452087 TOPBP1Q92547 1522 aa33.76■■■■□ 3
NUCB1-207ENST00000452087 IFT140Q96RY7 1462 aa33.65■■■□□ 2.98
NUCB1-207ENST00000452087 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
NUCB1-207ENST00000452087 TARBP1Q13395 1621 aaKnown RBP33.43■■■□□ 2.94
NUCB1-207ENST00000452087 ZNF608Q9ULD9 1512 aaPredicted RBP33.42■■■□□ 2.94
NUCB1-207ENST00000452087 EIF4G3O43432 1585 aaKnown RBP33.41■■■□□ 2.94
NUCB1-207ENST00000452087 CUX1P39880 1505 aa33.38■■■□□ 2.93
NUCB1-207ENST00000452087 FGD5Q6ZNL6 1462 aa33.34■■■□□ 2.93
NUCB1-207ENST00000452087 WDR97A6NE52 1622 aa33.29■■■□□ 2.92
NUCB1-207ENST00000452087 SOGA1O94964 1423 aa33.28■■■□□ 2.92
NUCB1-207ENST00000452087 RAD54L2Q9Y4B4 1467 aa33.24■■■□□ 2.91
NUCB1-207ENST00000452087 AQRO60306 1485 aaKnown RBP eCLIP33.18■■■□□ 2.92e-6■■■■■ 31.1
NUCB1-207ENST00000452087 OSCARQ8IYS5 282 aa33.18■■■□□ 2.9
NUCB1-207ENST00000452087 BIVM-ERCC5R4GMW8 1640 aa33.13■■■□□ 2.89
NUCB1-207ENST00000452087 TOP2BQ02880 1626 aa33.11■■■□□ 2.89
NUCB1-207ENST00000452087 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
NUCB1-207ENST00000452087 TDRD9Q8NDG6 1382 aaKnown RBP33.08■■■□□ 2.89
NUCB1-207ENST00000452087 CHD1O14646 1710 aa33.07■■■□□ 2.88
NUCB1-207ENST00000452087 SYNJ1O43426 1573 aa33.03■■■□□ 2.88
NUCB1-207ENST00000452087 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
NUCB1-207ENST00000452087 PBRM1Q86U86 1689 aa33■■■□□ 2.87
NUCB1-207ENST00000452087 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
NUCB1-207ENST00000452087 MAGI1Q96QZ7 1491 aaPredicted RBP32.96■■■□□ 2.87
NUCB1-207ENST00000452087 SNAPC4Q5SXM2 1469 aa32.95■■■□□ 2.87
NUCB1-207ENST00000452087 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.86
NUCB1-207ENST00000452087 GAPVD1Q14C86 1478 aa32.93■■■□□ 2.86
NUCB1-207ENST00000452087 FBLN2P98095 1184 aa32.86■■■□□ 2.85
NUCB1-207ENST00000452087 SYNJ2O15056 1496 aa32.81■■■□□ 2.84
NUCB1-207ENST00000452087 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
NUCB1-207ENST00000452087 RIMBP3CA6NJZ7 1639 aa32.74■■■□□ 2.83
NUCB1-207ENST00000452087 RIMBP3BA6NNM3 1639 aa32.74■■■□□ 2.83
NUCB1-207ENST00000452087 RIMBP3Q9UFD9 1639 aa32.74■■■□□ 2.83
NUCB1-207ENST00000452087 ARHGEF11O15085 1522 aa32.68■■■□□ 2.82
NUCB1-207ENST00000452087 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
NUCB1-207ENST00000452087 ADAMTS12P58397 1594 aa32.66■■■□□ 2.82
NUCB1-207ENST00000452087 TRIM41Q8WV44 630 aa32.64■■■□□ 2.82
NUCB1-207ENST00000452087 CLASP1Q7Z460 1538 aa32.63■■■□□ 2.81
NUCB1-207ENST00000452087 GRIN2AQ12879 1464 aa32.55■■■□□ 2.8
NUCB1-207ENST00000452087 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
NUCB1-207ENST00000452087 KIF27Q86VH2 1401 aa32.46■■■□□ 2.79
NUCB1-207ENST00000452087 NUP160Q12769 1436 aa32.4■■■□□ 2.78
NUCB1-207ENST00000452087 CUL7Q14999 1698 aa32.4■■■□□ 2.78
NUCB1-207ENST00000452087 CEP170Q5SW79 1584 aa32.38■■■□□ 2.77
NUCB1-207ENST00000452087 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
NUCB1-207ENST00000452087 CYB5RLQ6IPT4 315 aa32.29■■■□□ 2.76
NUCB1-207ENST00000452087 SHROOM2Q13796 1616 aa32.25■■■□□ 2.75
NUCB1-207ENST00000452087 IGF1RP08069 1367 aa32.23■■■□□ 2.75
NUCB1-207ENST00000452087 RUSC2Q8N2Y8 1516 aa32.2■■■□□ 2.74
NUCB1-207ENST00000452087 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
NUCB1-207ENST00000452087 ERCC6L2Q5T890 1561 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms