RNA–Protein interactions for RNA: ENST00000490113.1

RFK-206, Transcript of riboflavin kinase, humanhuman

TSL 2

Gene RFK, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFK-206ENST00000490113 NISCHQ9Y2I1 1504 aa20.19■□□□□ 0.82
RFK-206ENST00000490113 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
RFK-206ENST00000490113 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
RFK-206ENST00000490113 ZCCHC6Q5VYS8 1495 aaKnown RBP17.04■□□□□ 0.32
RFK-206ENST00000490113 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
RFK-206ENST00000490113 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
RFK-206ENST00000490113 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
RFK-206ENST00000490113 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
RFK-206ENST00000490113 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
RFK-206ENST00000490113 ABCC9O60706 1549 aa16.13■□□□□ 0.17
RFK-206ENST00000490113 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
RFK-206ENST00000490113 NACADO15069 1562 aa15.95■□□□□ 0.14
RFK-206ENST00000490113 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
RFK-206ENST00000490113 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
RFK-206ENST00000490113 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
RFK-206ENST00000490113 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
RFK-206ENST00000490113 LOC105371045A0A1W2PR82 267 aa15.7■□□□□ 0.1
RFK-206ENST00000490113 WIZO95785 1651 aa15.64■□□□□ 0.09
RFK-206ENST00000490113 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
RFK-206ENST00000490113 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
RFK-206ENST00000490113 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
RFK-206ENST00000490113 PCGF6Q9BYE7 350 aa15.44■□□□□ 0.06
RFK-206ENST00000490113 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
RFK-206ENST00000490113 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
RFK-206ENST00000490113 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
RFK-206ENST00000490113 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
RFK-206ENST00000490113 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
RFK-206ENST00000490113 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
RFK-206ENST00000490113 HRCP23327 699 aa15.32■□□□□ 0.04
RFK-206ENST00000490113 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
RFK-206ENST00000490113 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
RFK-206ENST00000490113 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
RFK-206ENST00000490113 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
RFK-206ENST00000490113 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
RFK-206ENST00000490113 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
RFK-206ENST00000490113 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
RFK-206ENST00000490113 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
RFK-206ENST00000490113 SOGA1O94964 1423 aa15.04■□□□□ -0
RFK-206ENST00000490113 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
RFK-206ENST00000490113 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
RFK-206ENST00000490113 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
RFK-206ENST00000490113 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
RFK-206ENST00000490113 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
RFK-206ENST00000490113 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
RFK-206ENST00000490113 EEA1Q15075 1411 aa14.82□□□□□ -0.04
RFK-206ENST00000490113 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
RFK-206ENST00000490113 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
RFK-206ENST00000490113 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
RFK-206ENST00000490113 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
RFK-206ENST00000490113 GOLGA3Q08378 1498 aa14.75□□□□□ -0.05
RFK-206ENST00000490113 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
RFK-206ENST00000490113 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
RFK-206ENST00000490113 KIF21BO75037 1637 aa14.7□□□□□ -0.06
RFK-206ENST00000490113 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
RFK-206ENST00000490113 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
RFK-206ENST00000490113 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
RFK-206ENST00000490113 RAPGEF2Q9Y4G8 1499 aa14.66□□□□□ -0.06
RFK-206ENST00000490113 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
RFK-206ENST00000490113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.07
RFK-206ENST00000490113 CUX1P39880 1505 aa14.64□□□□□ -0.07
RFK-206ENST00000490113 CFTRP13569 1480 aa14.62□□□□□ -0.07
RFK-206ENST00000490113 CLIP1P30622 1438 aa14.59□□□□□ -0.07
RFK-206ENST00000490113 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
RFK-206ENST00000490113 CC2D2AQ9P2K1 1620 aa14.53□□□□□ -0.08
RFK-206ENST00000490113 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
RFK-206ENST00000490113 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.08
RFK-206ENST00000490113 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
RFK-206ENST00000490113 VPS8Q8N3P4 1428 aa14.5□□□□□ -0.09
RFK-206ENST00000490113 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
RFK-206ENST00000490113 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
RFK-206ENST00000490113 KIF27Q86VH2 1401 aa14.46□□□□□ -0.09
RFK-206ENST00000490113 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
RFK-206ENST00000490113 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
RFK-206ENST00000490113 CUX2O14529 1486 aa14.39□□□□□ -0.11
RFK-206ENST00000490113 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
RFK-206ENST00000490113 IGF1RP08069 1367 aa14.37□□□□□ -0.11
RFK-206ENST00000490113 NESP48681 1621 aa14.36□□□□□ -0.11
RFK-206ENST00000490113 APLP2Q06481 763 aa14.34□□□□□ -0.11
RFK-206ENST00000490113 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
RFK-206ENST00000490113 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
RFK-206ENST00000490113 ARHGAP35Q9NRY4 1499 aa14.33□□□□□ -0.12
RFK-206ENST00000490113 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
RFK-206ENST00000490113 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
RFK-206ENST00000490113 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
RFK-206ENST00000490113 TOPBP1Q92547 1522 aa14.25□□□□□ -0.13
RFK-206ENST00000490113 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
RFK-206ENST00000490113 POLA1P09884 1462 aaPredicted RBP14.23□□□□□ -0.13
RFK-206ENST00000490113 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
RFK-206ENST00000490113 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
RFK-206ENST00000490113 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
RFK-206ENST00000490113 P3H3Q8IVL6 736 aa14.16□□□□□ -0.14
RFK-206ENST00000490113 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
RFK-206ENST00000490113 DIEXFQ68CQ4 756 aaKnown RBP14.15□□□□□ -0.14
RFK-206ENST00000490113 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
RFK-206ENST00000490113 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
RFK-206ENST00000490113 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
RFK-206ENST00000490113 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
RFK-206ENST00000490113 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
RFK-206ENST00000490113 ZNF316A6NFI3 1004 aaPredicted RBP14.1□□□□□ -0.15
RFK-206ENST00000490113 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms