RNA–Protein interactions for RNA: ENST00000494810.1

PDCD6IP-215, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-215ENST00000494810 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
PDCD6IP-215ENST00000494810 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
PDCD6IP-215ENST00000494810 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
PDCD6IP-215ENST00000494810 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
PDCD6IP-215ENST00000494810 FOXD1Q16676 465 aa19.14■□□□□ 0.65
PDCD6IP-215ENST00000494810 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
PDCD6IP-215ENST00000494810 MSH5O43196 834 aa18.02■□□□□ 0.48
PDCD6IP-215ENST00000494810 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
PDCD6IP-215ENST00000494810 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
PDCD6IP-215ENST00000494810 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
PDCD6IP-215ENST00000494810 ADRA2BP18089 450 aa17.71■□□□□ 0.43
PDCD6IP-215ENST00000494810 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
PDCD6IP-215ENST00000494810 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
PDCD6IP-215ENST00000494810 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
PDCD6IP-215ENST00000494810 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
PDCD6IP-215ENST00000494810 HOXD11P31277 338 aaPredicted RBP15.64■□□□□ 0.09
PDCD6IP-215ENST00000494810 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
PDCD6IP-215ENST00000494810 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
PDCD6IP-215ENST00000494810 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
PDCD6IP-215ENST00000494810 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
PDCD6IP-215ENST00000494810 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
PDCD6IP-215ENST00000494810 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
PDCD6IP-215ENST00000494810 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
PDCD6IP-215ENST00000494810 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
PDCD6IP-215ENST00000494810 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
PDCD6IP-215ENST00000494810 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
PDCD6IP-215ENST00000494810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDCD6IP-215ENST00000494810 KCNA4P22459 653 aa14.53□□□□□ -0.08
PDCD6IP-215ENST00000494810 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
PDCD6IP-215ENST00000494810 CAPN15O75808 1086 aa14.35□□□□□ -0.11
PDCD6IP-215ENST00000494810 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
PDCD6IP-215ENST00000494810 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
PDCD6IP-215ENST00000494810 DSG3P32926 999 aa14.31□□□□□ -0.12
PDCD6IP-215ENST00000494810 APLP2Q06481 763 aa14.22□□□□□ -0.13
PDCD6IP-215ENST00000494810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
PDCD6IP-215ENST00000494810 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
PDCD6IP-215ENST00000494810 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
PDCD6IP-215ENST00000494810 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
PDCD6IP-215ENST00000494810 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
PDCD6IP-215ENST00000494810 ABCB7O75027 752 aa13.97□□□□□ -0.17
PDCD6IP-215ENST00000494810 POTEHQ6S545 545 aa13.9□□□□□ -0.18
PDCD6IP-215ENST00000494810 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
PDCD6IP-215ENST00000494810 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
PDCD6IP-215ENST00000494810 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
PDCD6IP-215ENST00000494810 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
PDCD6IP-215ENST00000494810 ABCC9O60706 1549 aa13.7□□□□□ -0.22
PDCD6IP-215ENST00000494810 POLA2Q14181 598 aa13.7□□□□□ -0.22
PDCD6IP-215ENST00000494810 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
PDCD6IP-215ENST00000494810 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
PDCD6IP-215ENST00000494810 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
PDCD6IP-215ENST00000494810 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
PDCD6IP-215ENST00000494810 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
PDCD6IP-215ENST00000494810 ZBTB22O15209 634 aa13.33□□□□□ -0.28
PDCD6IP-215ENST00000494810 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
PDCD6IP-215ENST00000494810 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
PDCD6IP-215ENST00000494810 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
PDCD6IP-215ENST00000494810 RB1CC1Q8TDY2 1594 aa13.1□□□□□ -0.31
PDCD6IP-215ENST00000494810 FBLN2P98095 1184 aa13.06□□□□□ -0.32
PDCD6IP-215ENST00000494810 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
PDCD6IP-215ENST00000494810 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
PDCD6IP-215ENST00000494810 NACADO15069 1562 aa13.03□□□□□ -0.32
PDCD6IP-215ENST00000494810 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
PDCD6IP-215ENST00000494810 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
PDCD6IP-215ENST00000494810 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
PDCD6IP-215ENST00000494810 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.338e-7■■■■□ 25.7
PDCD6IP-215ENST00000494810 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
PDCD6IP-215ENST00000494810 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
PDCD6IP-215ENST00000494810 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
PDCD6IP-215ENST00000494810 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
PDCD6IP-215ENST00000494810 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
PDCD6IP-215ENST00000494810 HAX1O00165 279 aa12.87□□□□□ -0.35
PDCD6IP-215ENST00000494810 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
PDCD6IP-215ENST00000494810 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
PDCD6IP-215ENST00000494810 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
PDCD6IP-215ENST00000494810 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
PDCD6IP-215ENST00000494810 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
PDCD6IP-215ENST00000494810 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
PDCD6IP-215ENST00000494810 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
PDCD6IP-215ENST00000494810 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDCD6IP-215ENST00000494810 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
PDCD6IP-215ENST00000494810 EVX2Q03828 476 aa12.65□□□□□ -0.38
PDCD6IP-215ENST00000494810 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
PDCD6IP-215ENST00000494810 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
PDCD6IP-215ENST00000494810 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
PDCD6IP-215ENST00000494810 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
PDCD6IP-215ENST00000494810 SHROOM4Q9ULL8 1493 aa12.54□□□□□ -0.4
PDCD6IP-215ENST00000494810 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
PDCD6IP-215ENST00000494810 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
PDCD6IP-215ENST00000494810 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
PDCD6IP-215ENST00000494810 GABBR2O75899 941 aa12.4□□□□□ -0.42
PDCD6IP-215ENST00000494810 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
PDCD6IP-215ENST00000494810 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
PDCD6IP-215ENST00000494810 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
PDCD6IP-215ENST00000494810 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
PDCD6IP-215ENST00000494810 CD44P16070 742 aaKnown RBP12.3□□□□□ -0.44
PDCD6IP-215ENST00000494810 CLCN6P51797 869 aa12.27□□□□□ -0.45
PDCD6IP-215ENST00000494810 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
PDCD6IP-215ENST00000494810 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
PDCD6IP-215ENST00000494810 LHX8Q68G74 356 aa12.17□□□□□ -0.46
PDCD6IP-215ENST00000494810 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms