RNA–Protein interactions for RNA: ENST00000518696.5

MRPL13-202, Transcript of mitochondrial ribosomal protein L13, humanhuman

TSL 1 (best)

Gene MRPL13, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL13-202ENST00000518696 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
MRPL13-202ENST00000518696 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
MRPL13-202ENST00000518696 ABCC9O60706 1549 aa24.79■■□□□ 1.56
MRPL13-202ENST00000518696 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
MRPL13-202ENST00000518696 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.48
MRPL13-202ENST00000518696 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
MRPL13-202ENST00000518696 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
MRPL13-202ENST00000518696 NACADO15069 1562 aa24.18■■□□□ 1.46
MRPL13-202ENST00000518696 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
MRPL13-202ENST00000518696 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
MRPL13-202ENST00000518696 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
MRPL13-202ENST00000518696 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
MRPL13-202ENST00000518696 BICRAQ9NZM4 1560 aa23.37■■□□□ 1.33
MRPL13-202ENST00000518696 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
MRPL13-202ENST00000518696 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
MRPL13-202ENST00000518696 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
MRPL13-202ENST00000518696 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
MRPL13-202ENST00000518696 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
MRPL13-202ENST00000518696 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
MRPL13-202ENST00000518696 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.2
MRPL13-202ENST00000518696 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.19
MRPL13-202ENST00000518696 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
MRPL13-202ENST00000518696 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
MRPL13-202ENST00000518696 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
MRPL13-202ENST00000518696 WIZO95785 1651 aa22.38■■□□□ 1.17
MRPL13-202ENST00000518696 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
MRPL13-202ENST00000518696 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
MRPL13-202ENST00000518696 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
MRPL13-202ENST00000518696 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
MRPL13-202ENST00000518696 BAZ1BQ9UIG0 1483 aaKnown RBP22.21■■□□□ 1.15
MRPL13-202ENST00000518696 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
MRPL13-202ENST00000518696 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
MRPL13-202ENST00000518696 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
MRPL13-202ENST00000518696 CFTRP13569 1480 aa21.69■■□□□ 1.06
MRPL13-202ENST00000518696 NESP48681 1621 aa21.62■■□□□ 1.05
MRPL13-202ENST00000518696 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
MRPL13-202ENST00000518696 PRDM2Q13029 1718 aa21.47■■□□□ 1.03
MRPL13-202ENST00000518696 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
MRPL13-202ENST00000518696 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
MRPL13-202ENST00000518696 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1.01
MRPL13-202ENST00000518696 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
MRPL13-202ENST00000518696 ERCC6Q03468 1493 aa21.27■■□□□ 1
MRPL13-202ENST00000518696 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
MRPL13-202ENST00000518696 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
MRPL13-202ENST00000518696 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
MRPL13-202ENST00000518696 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
MRPL13-202ENST00000518696 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
MRPL13-202ENST00000518696 CUX1P39880 1505 aa21.19■□□□□ 0.98
MRPL13-202ENST00000518696 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
MRPL13-202ENST00000518696 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
MRPL13-202ENST00000518696 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
MRPL13-202ENST00000518696 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
MRPL13-202ENST00000518696 WDR62O43379 1518 aa21.14■□□□□ 0.97
MRPL13-202ENST00000518696 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
MRPL13-202ENST00000518696 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
MRPL13-202ENST00000518696 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
MRPL13-202ENST00000518696 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
MRPL13-202ENST00000518696 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
MRPL13-202ENST00000518696 CUX2O14529 1486 aa20.98■□□□□ 0.95
MRPL13-202ENST00000518696 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
MRPL13-202ENST00000518696 SOGA1O94964 1423 aa20.93■□□□□ 0.94
MRPL13-202ENST00000518696 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
MRPL13-202ENST00000518696 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.94
MRPL13-202ENST00000518696 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
MRPL13-202ENST00000518696 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
MRPL13-202ENST00000518696 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
MRPL13-202ENST00000518696 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
MRPL13-202ENST00000518696 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
MRPL13-202ENST00000518696 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
MRPL13-202ENST00000518696 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
MRPL13-202ENST00000518696 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
MRPL13-202ENST00000518696 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
MRPL13-202ENST00000518696 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
MRPL13-202ENST00000518696 EEA1Q15075 1411 aa20.68■□□□□ 0.9
MRPL13-202ENST00000518696 IGF1RP08069 1367 aa20.67■□□□□ 0.9
MRPL13-202ENST00000518696 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
MRPL13-202ENST00000518696 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
MRPL13-202ENST00000518696 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
MRPL13-202ENST00000518696 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
MRPL13-202ENST00000518696 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
MRPL13-202ENST00000518696 PBRM1Q86U86 1689 aa20.55■□□□□ 0.88
MRPL13-202ENST00000518696 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
MRPL13-202ENST00000518696 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
MRPL13-202ENST00000518696 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
MRPL13-202ENST00000518696 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
MRPL13-202ENST00000518696 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
MRPL13-202ENST00000518696 CUL7Q14999 1698 aa20.47■□□□□ 0.87
MRPL13-202ENST00000518696 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
MRPL13-202ENST00000518696 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
MRPL13-202ENST00000518696 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
MRPL13-202ENST00000518696 KIF21BO75037 1637 aa20.41■□□□□ 0.86
MRPL13-202ENST00000518696 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
MRPL13-202ENST00000518696 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
MRPL13-202ENST00000518696 GOLGA3Q08378 1498 aa20.33■□□□□ 0.84
MRPL13-202ENST00000518696 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
MRPL13-202ENST00000518696 FBLN2P98095 1184 aa20.3■□□□□ 0.84
MRPL13-202ENST00000518696 CHD1O14646 1710 aa20.28■□□□□ 0.84
MRPL13-202ENST00000518696 NUP160Q12769 1436 aa20.28■□□□□ 0.84
MRPL13-202ENST00000518696 EHMT2Q96KQ7 1210 aa20.25■□□□□ 0.83
MRPL13-202ENST00000518696 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms