RNA–Protein interactions for RNA: ENST00000630701.1

APOC3-205, Transcript of apolipoprotein C3, humanhuman

TSL 1 (best) BASIC

Gene APOC3, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-205ENST00000630701 NISCHQ9Y2I1 1504 aa49.67■■■■■ 5.54
APOC3-205ENST00000630701 CCDC180Q9P1Z9 1646 aa43.84■■■■■ 4.61
APOC3-205ENST00000630701 ABCC9O60706 1549 aa42.26■■■■■ 4.36
APOC3-205ENST00000630701 ZCCHC6Q5VYS8 1495 aaKnown RBP41.52■■■■■ 4.24
APOC3-205ENST00000630701 DCAF8L2P0C7V8 631 aa41.25■■■■■ 4.19
APOC3-205ENST00000630701 DCAF1Q9Y4B6 1507 aa41.16■■■■■ 4.18
APOC3-205ENST00000630701 MYO15BQ96JP2 1530 aa41.1■■■■■ 4.17
APOC3-205ENST00000630701 NACADO15069 1562 aa41.1■■■■■ 4.17
APOC3-205ENST00000630701 RB1CC1Q8TDY2 1594 aa40.97■■■■■ 4.15
APOC3-205ENST00000630701 SCRIBQ14160 1630 aa40.04■■■■■ 4
APOC3-205ENST00000630701 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
APOC3-205ENST00000630701 BICRAQ9NZM4 1560 aa39.67■■■■□ 3.94
APOC3-205ENST00000630701 PABPN1Q86U42 306 aaKnown RBP eCLIP39.62■■■■□ 3.93
APOC3-205ENST00000630701 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
APOC3-205ENST00000630701 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
APOC3-205ENST00000630701 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
APOC3-205ENST00000630701 BAZ1AQ9NRL2 1556 aaPredicted RBP38.47■■■■□ 3.75
APOC3-205ENST00000630701 SMARCA4P51532 1647 aa38.38■■■■□ 3.73
APOC3-205ENST00000630701 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
APOC3-205ENST00000630701 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
APOC3-205ENST00000630701 DNAJC5BQ9UF47 199 aa38.18■■■■□ 3.7
APOC3-205ENST00000630701 RSF1Q96T23 1441 aaPredicted RBP38.11■■■■□ 3.69
APOC3-205ENST00000630701 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
APOC3-205ENST00000630701 SMARCA2P51531 1590 aa38.03■■■■□ 3.68
APOC3-205ENST00000630701 PEG3Q9GZU2 1588 aa38.02■■■■□ 3.68
APOC3-205ENST00000630701 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
APOC3-205ENST00000630701 WIZO95785 1651 aa37.86■■■■□ 3.65
APOC3-205ENST00000630701 HMGXB3Q12766 1538 aa37.78■■■■□ 3.64
APOC3-205ENST00000630701 BAZ1BQ9UIG0 1483 aaKnown RBP37.76■■■■□ 3.63
APOC3-205ENST00000630701 SUPT5HO00267 1087 aaKnown RBP37.64■■■■□ 3.62
APOC3-205ENST00000630701 TOP2AP11388 1531 aaKnown RBP37.55■■■■□ 3.6
APOC3-205ENST00000630701 CCDC88BA6NC98 1476 aa37.11■■■■□ 3.53
APOC3-205ENST00000630701 CADPSQ9ULU8 1353 aa36.88■■■■□ 3.49
APOC3-205ENST00000630701 LAMC3Q9Y6N6 1575 aa36.8■■■■□ 3.48
APOC3-205ENST00000630701 CFTRP13569 1480 aa36.78■■■■□ 3.48
APOC3-205ENST00000630701 NESP48681 1621 aa36.75■■■■□ 3.47
APOC3-205ENST00000630701 PDS5BQ9NTI5 1447 aa36.57■■■■□ 3.44
APOC3-205ENST00000630701 PRDM2Q13029 1718 aa36.45■■■■□ 3.43
APOC3-205ENST00000630701 FANCD2Q9BXW9 1451 aa36.42■■■■□ 3.42
APOC3-205ENST00000630701 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
APOC3-205ENST00000630701 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
APOC3-205ENST00000630701 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
APOC3-205ENST00000630701 MRC2Q9UBG0 1479 aa36.12■■■■□ 3.37
APOC3-205ENST00000630701 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
APOC3-205ENST00000630701 URB2Q14146 1524 aaKnown RBP35.99■■■■□ 3.35
APOC3-205ENST00000630701 ABCC8Q09428 1581 aa35.99■■■■□ 3.35
APOC3-205ENST00000630701 WDR62O43379 1518 aa35.97■■■■□ 3.35
APOC3-205ENST00000630701 WRNQ14191 1432 aaPredicted RBP eCLIP35.92■■■■□ 3.34
APOC3-205ENST00000630701 DNMBPQ6XZF7 1577 aa35.92■■■■□ 3.34
APOC3-205ENST00000630701 TOPBP1Q92547 1522 aa35.9■■■■□ 3.34
APOC3-205ENST00000630701 CUX1P39880 1505 aa35.87■■■■□ 3.33
APOC3-205ENST00000630701 CUX2O14529 1486 aa35.8■■■■□ 3.32
APOC3-205ENST00000630701 TOP2BQ02880 1626 aa35.75■■■■□ 3.31
APOC3-205ENST00000630701 SYNJ1O43426 1573 aa35.74■■■■□ 3.31
APOC3-205ENST00000630701 BIVM-ERCC5R4GMW8 1640 aa35.71■■■■□ 3.31
APOC3-205ENST00000630701 FGD5Q6ZNL6 1462 aa35.65■■■■□ 3.3
APOC3-205ENST00000630701 POLA1P09884 1462 aaPredicted RBP35.64■■■■□ 3.3
APOC3-205ENST00000630701 TRIM41Q8WV44 630 aa35.56■■■■□ 3.28
APOC3-205ENST00000630701 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
APOC3-205ENST00000630701 SOGA1O94964 1423 aa35.54■■■■□ 3.28
APOC3-205ENST00000630701 CHIC1Q5VXU3 224 aa35.53■■■■□ 3.28
APOC3-205ENST00000630701 RAD54L2Q9Y4B4 1467 aa35.47■■■■□ 3.27
APOC3-205ENST00000630701 TARBP1Q13395 1621 aaKnown RBP35.43■■■■□ 3.26
APOC3-205ENST00000630701 ABCA10Q8WWZ4 1543 aa35.36■■■■□ 3.25
APOC3-205ENST00000630701 WDR97A6NE52 1622 aa35.28■■■■□ 3.24
APOC3-205ENST00000630701 ZNF608Q9ULD9 1512 aaPredicted RBP35.27■■■■□ 3.24
APOC3-205ENST00000630701 TDRD9Q8NDG6 1382 aaKnown RBP35.24■■■■□ 3.23
APOC3-205ENST00000630701 AQRO60306 1485 aaKnown RBP eCLIP35.18■■■■□ 3.222e-7■■■■□ 24.8
APOC3-205ENST00000630701 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
APOC3-205ENST00000630701 KIF27Q86VH2 1401 aa35.14■■■■□ 3.22
APOC3-205ENST00000630701 GAPVD1Q14C86 1478 aa35.13■■■■□ 3.21
APOC3-205ENST00000630701 ABCA5Q8WWZ7 1642 aa35.12■■■■□ 3.21
APOC3-205ENST00000630701 GRIN2BQ13224 1484 aa35.04■■■■□ 3.2
APOC3-205ENST00000630701 ERICH3Q5RHP9 1530 aa34.96■■■■□ 3.19
APOC3-205ENST00000630701 RUSC2Q8N2Y8 1516 aa34.95■■■■□ 3.19
APOC3-205ENST00000630701 EEA1Q15075 1411 aa34.94■■■■□ 3.18
APOC3-205ENST00000630701 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
APOC3-205ENST00000630701 IGF1RP08069 1367 aa34.9■■■■□ 3.18
APOC3-205ENST00000630701 SNAPC4Q5SXM2 1469 aa34.88■■■■□ 3.17
APOC3-205ENST00000630701 MAGI1Q96QZ7 1491 aaPredicted RBP34.88■■■■□ 3.17
APOC3-205ENST00000630701 CSRNP3Q8WYN3 585 aa34.77■■■■□ 3.16
APOC3-205ENST00000630701 FHAD1B1AJZ9 1412 aa34.76■■■■□ 3.16
APOC3-205ENST00000630701 FAM9AQ8IZU1 332 aaPredicted RBP34.76■■■■□ 3.16
APOC3-205ENST00000630701 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
APOC3-205ENST00000630701 CUL7Q14999 1698 aa34.74■■■■□ 3.15
APOC3-205ENST00000630701 SYNJ2O15056 1496 aa34.73■■■■□ 3.15
APOC3-205ENST00000630701 CARMIL1Q5VZK9 1371 aa34.72■■■■□ 3.15
APOC3-205ENST00000630701 CHMP7Q8WUX9 453 aaPredicted RBP34.69■■■■□ 3.14
APOC3-205ENST00000630701 FBLN2P98095 1184 aa34.65■■■■□ 3.14
APOC3-205ENST00000630701 PRXQ9BXM0 1461 aa34.62■■■■□ 3.13
APOC3-205ENST00000630701 GRIN2AQ12879 1464 aa34.58■■■■□ 3.13
APOC3-205ENST00000630701 RAPGEF2Q9Y4G8 1499 aa34.58■■■■□ 3.13
APOC3-205ENST00000630701 CHD1O14646 1710 aa34.55■■■■□ 3.12
APOC3-205ENST00000630701 OSCARQ8IYS5 282 aa34.47■■■■□ 3.11
APOC3-205ENST00000630701 KIF21BO75037 1637 aa34.46■■■■□ 3.11
APOC3-205ENST00000630701 NUP160Q12769 1436 aa34.41■■■■□ 3.1
APOC3-205ENST00000630701 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
APOC3-205ENST00000630701 CEP170Q5SW79 1584 aa34.33■■■■□ 3.09
APOC3-205ENST00000630701 KIAA0586Q9BVV6 1533 aa34.25■■■■□ 3.07
APOC3-205ENST00000630701 CLASP1Q7Z460 1538 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms