RNA–Protein interactions for RNA: ENST00000366425.3

GP1BB-201, Transcript of glycoprotein Ib platelet subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GP1BB, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GP1BB-201ENST00000366425 NISCHQ9Y2I1 1504 aa52.15■■■■■ 5.94
GP1BB-201ENST00000366425 CCDC180Q9P1Z9 1646 aa46.13■■■■■ 4.98
GP1BB-201ENST00000366425 ABCC9O60706 1549 aa44.79■■■■■ 4.76
GP1BB-201ENST00000366425 ZCCHC6Q5VYS8 1495 aaKnown RBP43.56■■■■■ 4.56
GP1BB-201ENST00000366425 DCAF8L2P0C7V8 631 aa43.32■■■■■ 4.52
GP1BB-201ENST00000366425 NACADO15069 1562 aa43.22■■■■■ 4.51
GP1BB-201ENST00000366425 RB1CC1Q8TDY2 1594 aa43.17■■■■■ 4.5
GP1BB-201ENST00000366425 DCAF1Q9Y4B6 1507 aa43.09■■■■■ 4.49
GP1BB-201ENST00000366425 MYO15BQ96JP2 1530 aa43.08■■■■■ 4.49
GP1BB-201ENST00000366425 UNC13AQ9UPW8 1703 aa42.4■■■■■ 4.38
GP1BB-201ENST00000366425 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
GP1BB-201ENST00000366425 SHROOM4Q9ULL8 1493 aa42.15■■■■■ 4.34
GP1BB-201ENST00000366425 BICRAQ9NZM4 1560 aa42.01■■■■■ 4.32
GP1BB-201ENST00000366425 PABPN1Q86U42 306 aaKnown RBP eCLIP41.93■■■■■ 4.3
GP1BB-201ENST00000366425 SUPT5HO00267 1087 aaKnown RBP40.86■■■■■ 4.13
GP1BB-201ENST00000366425 DNAJC5BQ9UF47 199 aa40.83■■■■■ 4.13
GP1BB-201ENST00000366425 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
GP1BB-201ENST00000366425 CECR2Q9BXF3 1484 aa40.67■■■■■ 4.1
GP1BB-201ENST00000366425 CC2D2AQ9P2K1 1620 aa40.54■■■■■ 4.08
GP1BB-201ENST00000366425 SMARCA4P51532 1647 aa40.4■■■■■ 4.06
GP1BB-201ENST00000366425 BAZ1AQ9NRL2 1556 aaPredicted RBP40.34■■■■■ 4.05
GP1BB-201ENST00000366425 MROH2BQ7Z745 1585 aa40.28■■■■■ 4.04
GP1BB-201ENST00000366425 ATAD2BQ9ULI0 1458 aa40.04■■■■■ 4
GP1BB-201ENST00000366425 RSF1Q96T23 1441 aaPredicted RBP40.01■■■■■ 4
GP1BB-201ENST00000366425 PEG3Q9GZU2 1588 aa39.96■■■■□ 3.99
GP1BB-201ENST00000366425 SMARCA2P51531 1590 aa39.94■■■■□ 3.98
GP1BB-201ENST00000366425 NCAPD3P42695 1498 aa39.89■■■■□ 3.98
GP1BB-201ENST00000366425 WIZO95785 1651 aa39.88■■■■□ 3.97
GP1BB-201ENST00000366425 HMGXB3Q12766 1538 aa39.76■■■■□ 3.95
GP1BB-201ENST00000366425 BAZ1BQ9UIG0 1483 aaKnown RBP39.7■■■■□ 3.95
GP1BB-201ENST00000366425 CHIC1Q5VXU3 224 aa39.5■■■■□ 3.91
GP1BB-201ENST00000366425 TOP2AP11388 1531 aaKnown RBP39.4■■■■□ 3.9
GP1BB-201ENST00000366425 CCDC88BA6NC98 1476 aa38.96■■■■□ 3.83
GP1BB-201ENST00000366425 NESP48681 1621 aa38.95■■■■□ 3.83
GP1BB-201ENST00000366425 LAMC3Q9Y6N6 1575 aa38.76■■■■□ 3.8
GP1BB-201ENST00000366425 CADPSQ9ULU8 1353 aa38.75■■■■□ 3.79
GP1BB-201ENST00000366425 CFTRP13569 1480 aa38.65■■■■□ 3.78
GP1BB-201ENST00000366425 KIF21AQ7Z4S6 1674 aa38.49■■■■□ 3.75
GP1BB-201ENST00000366425 ERCC6Q03468 1493 aa38.46■■■■□ 3.75
GP1BB-201ENST00000366425 PRDM2Q13029 1718 aa38.43■■■■□ 3.74
GP1BB-201ENST00000366425 PDS5BQ9NTI5 1447 aa38.42■■■■□ 3.74
GP1BB-201ENST00000366425 TRIM41Q8WV44 630 aa38.41■■■■□ 3.74
GP1BB-201ENST00000366425 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
GP1BB-201ENST00000366425 THOC2Q8NI27 1593 aaKnown RBP38.24■■■■□ 3.71
GP1BB-201ENST00000366425 CEP164Q9UPV0 1460 aa38.23■■■■□ 3.71
GP1BB-201ENST00000366425 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
GP1BB-201ENST00000366425 URB2Q14146 1524 aaKnown RBP38.01■■■■□ 3.68
GP1BB-201ENST00000366425 WDR62O43379 1518 aa37.99■■■■□ 3.67
GP1BB-201ENST00000366425 ABCC8Q09428 1581 aa37.94■■■■□ 3.66
GP1BB-201ENST00000366425 LOC105371045A0A1W2PR82 267 aa37.94■■■■□ 3.66
GP1BB-201ENST00000366425 CUX2O14529 1486 aa37.87■■■■□ 3.65
GP1BB-201ENST00000366425 TOPBP1Q92547 1522 aa37.81■■■■□ 3.64
GP1BB-201ENST00000366425 DNMBPQ6XZF7 1577 aa37.79■■■■□ 3.64
GP1BB-201ENST00000366425 CUX1P39880 1505 aa37.75■■■■□ 3.63
GP1BB-201ENST00000366425 FAM9AQ8IZU1 332 aaPredicted RBP37.67■■■■□ 3.62
GP1BB-201ENST00000366425 WRNQ14191 1432 aaPredicted RBP eCLIP37.64■■■■□ 3.62
GP1BB-201ENST00000366425 SYNJ1O43426 1573 aa37.59■■■■□ 3.61
GP1BB-201ENST00000366425 POLA1P09884 1462 aaPredicted RBP37.53■■■■□ 3.6
GP1BB-201ENST00000366425 FGD5Q6ZNL6 1462 aa37.51■■■■□ 3.59
GP1BB-201ENST00000366425 BIVM-ERCC5R4GMW8 1640 aa37.5■■■■□ 3.59
GP1BB-201ENST00000366425 EEA1Q15075 1411 aa37.49■■■■□ 3.59
GP1BB-201ENST00000366425 TOP2BQ02880 1626 aa37.49■■■■□ 3.59
GP1BB-201ENST00000366425 TARBP1Q13395 1621 aaKnown RBP37.4■■■■□ 3.58
GP1BB-201ENST00000366425 RAD54L2Q9Y4B4 1467 aa37.4■■■■□ 3.58
GP1BB-201ENST00000366425 IFT140Q96RY7 1462 aa37.39■■■■□ 3.58
GP1BB-201ENST00000366425 SOGA1O94964 1423 aa37.33■■■■□ 3.57
GP1BB-201ENST00000366425 ZNF608Q9ULD9 1512 aaPredicted RBP37.33■■■■□ 3.57
GP1BB-201ENST00000366425 WDR97A6NE52 1622 aa37.23■■■■□ 3.55
GP1BB-201ENST00000366425 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
GP1BB-201ENST00000366425 RUSC2Q8N2Y8 1516 aa37.16■■■■□ 3.54
GP1BB-201ENST00000366425 CSRNP3Q8WYN3 585 aa37.14■■■■□ 3.54
GP1BB-201ENST00000366425 ABCA10Q8WWZ4 1543 aa37.12■■■■□ 3.53
GP1BB-201ENST00000366425 AQRO60306 1485 aaKnown RBP eCLIP37.12■■■■□ 3.531e-10■■■□□ 18.4
GP1BB-201ENST00000366425 TDRD9Q8NDG6 1382 aaKnown RBP37.11■■■■□ 3.53
GP1BB-201ENST00000366425 EHMT2Q96KQ7 1210 aa37.05■■■■□ 3.52
GP1BB-201ENST00000366425 ABCA5Q8WWZ7 1642 aa37■■■■□ 3.51
GP1BB-201ENST00000366425 KIF21BO75037 1637 aa36.99■■■■□ 3.51
GP1BB-201ENST00000366425 TNIKQ9UKE5 1360 aa36.96■■■■□ 3.51
GP1BB-201ENST00000366425 GOLGA3Q08378 1498 aa36.96■■■■□ 3.51
GP1BB-201ENST00000366425 DNAJC5Q9H3Z4 198 aa36.94■■■■□ 3.5
GP1BB-201ENST00000366425 GAPVD1Q14C86 1478 aa36.91■■■■□ 3.5
GP1BB-201ENST00000366425 PBRM1Q86U86 1689 aa36.88■■■■□ 3.49
GP1BB-201ENST00000366425 PCGF6Q9BYE7 350 aa36.84■■■■□ 3.49
GP1BB-201ENST00000366425 GRIN2BQ13224 1484 aa36.81■■■■□ 3.48
GP1BB-201ENST00000366425 SNAPC4Q5SXM2 1469 aa36.78■■■■□ 3.48
GP1BB-201ENST00000366425 TRIM26Q12899 539 aaPredicted RBP36.78■■■■□ 3.48
GP1BB-201ENST00000366425 CEP162Q5TB80 1403 aa36.77■■■■□ 3.48
GP1BB-201ENST00000366425 KIF27Q86VH2 1401 aa36.7■■■■□ 3.47
GP1BB-201ENST00000366425 UBTFP17480 764 aaKnown RBP36.68■■■■□ 3.46
GP1BB-201ENST00000366425 MAGI1Q96QZ7 1491 aaPredicted RBP36.67■■■■□ 3.46
GP1BB-201ENST00000366425 ERICH3Q5RHP9 1530 aa36.66■■■■□ 3.46
GP1BB-201ENST00000366425 CHD1O14646 1710 aa36.64■■■■□ 3.46
GP1BB-201ENST00000366425 ADAMTS12P58397 1594 aa36.61■■■■□ 3.45
GP1BB-201ENST00000366425 IGF1RP08069 1367 aa36.56■■■■□ 3.44
GP1BB-201ENST00000366425 PRXQ9BXM0 1461 aa36.56■■■■□ 3.44
GP1BB-201ENST00000366425 RAPGEF2Q9Y4G8 1499 aa36.56■■■■□ 3.44
GP1BB-201ENST00000366425 SYNJ2O15056 1496 aa36.54■■■■□ 3.44
GP1BB-201ENST00000366425 FBLN2P98095 1184 aa36.49■■■■□ 3.43
GP1BB-201ENST00000366425 FHAD1B1AJZ9 1412 aa36.47■■■■□ 3.43
GP1BB-201ENST00000366425 CHMP7Q8WUX9 453 aaPredicted RBP36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms