RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
PCOLCE-205ENST00000472348 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
PCOLCE-205ENST00000472348 ABCC9O60706 1549 aa32.48■■■□□ 2.79
PCOLCE-205ENST00000472348 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
PCOLCE-205ENST00000472348 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
PCOLCE-205ENST00000472348 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
PCOLCE-205ENST00000472348 NACADO15069 1562 aa31.62■■■□□ 2.65
PCOLCE-205ENST00000472348 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
PCOLCE-205ENST00000472348 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
PCOLCE-205ENST00000472348 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
PCOLCE-205ENST00000472348 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
PCOLCE-205ENST00000472348 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
PCOLCE-205ENST00000472348 SHROOM4Q9ULL8 1493 aa30.41■■■□□ 2.46
PCOLCE-205ENST00000472348 PABPN1Q86U42 306 aaKnown RBP eCLIP30.34■■■□□ 2.45
PCOLCE-205ENST00000472348 DNAJC5BQ9UF47 199 aa29.94■■■□□ 2.38
PCOLCE-205ENST00000472348 EIF4G1Q04637 1599 aaKnown RBP29.59■■■□□ 2.33
PCOLCE-205ENST00000472348 BAZ1AQ9NRL2 1556 aaPredicted RBP29.57■■■□□ 2.32
PCOLCE-205ENST00000472348 CECR2Q9BXF3 1484 aa29.51■■■□□ 2.31
PCOLCE-205ENST00000472348 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
PCOLCE-205ENST00000472348 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
PCOLCE-205ENST00000472348 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
PCOLCE-205ENST00000472348 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
PCOLCE-205ENST00000472348 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
PCOLCE-205ENST00000472348 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
PCOLCE-205ENST00000472348 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
PCOLCE-205ENST00000472348 NCAPD3P42695 1498 aa29.14■■■□□ 2.26
PCOLCE-205ENST00000472348 HMGXB3Q12766 1538 aa29.08■■■□□ 2.25
PCOLCE-205ENST00000472348 WIZO95785 1651 aa29.03■■■□□ 2.24
PCOLCE-205ENST00000472348 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
PCOLCE-205ENST00000472348 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
PCOLCE-205ENST00000472348 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
PCOLCE-205ENST00000472348 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
PCOLCE-205ENST00000472348 LAMC3Q9Y6N6 1575 aa28.3■■■□□ 2.12
PCOLCE-205ENST00000472348 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
PCOLCE-205ENST00000472348 CFTRP13569 1480 aa28.23■■■□□ 2.11
PCOLCE-205ENST00000472348 PRDM2Q13029 1718 aa28.19■■■□□ 2.1
PCOLCE-205ENST00000472348 NESP48681 1621 aa28.08■■■□□ 2.09
PCOLCE-205ENST00000472348 PDS5BQ9NTI5 1447 aa28.02■■■□□ 2.08
PCOLCE-205ENST00000472348 ERCC6Q03468 1493 aa27.98■■■□□ 2.07
PCOLCE-205ENST00000472348 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
PCOLCE-205ENST00000472348 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
PCOLCE-205ENST00000472348 CEP164Q9UPV0 1460 aa27.82■■■□□ 2.04
PCOLCE-205ENST00000472348 ABCC8Q09428 1581 aa27.7■■■□□ 2.03
PCOLCE-205ENST00000472348 CUX2O14529 1486 aa27.68■■■□□ 2.02
PCOLCE-205ENST00000472348 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
PCOLCE-205ENST00000472348 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
PCOLCE-205ENST00000472348 WDR62O43379 1518 aa27.62■■■□□ 2.01
PCOLCE-205ENST00000472348 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
PCOLCE-205ENST00000472348 URB2Q14146 1524 aaKnown RBP27.55■■■□□ 2
PCOLCE-205ENST00000472348 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
PCOLCE-205ENST00000472348 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
PCOLCE-205ENST00000472348 TOPBP1Q92547 1522 aa27.51■■■□□ 2
PCOLCE-205ENST00000472348 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
PCOLCE-205ENST00000472348 CUX1P39880 1505 aa27.48■■□□□ 1.99
PCOLCE-205ENST00000472348 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
PCOLCE-205ENST00000472348 POLA1P09884 1462 aaPredicted RBP27.31■■□□□ 1.96
PCOLCE-205ENST00000472348 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
PCOLCE-205ENST00000472348 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
PCOLCE-205ENST00000472348 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
PCOLCE-205ENST00000472348 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
PCOLCE-205ENST00000472348 SOGA1O94964 1423 aa27.19■■□□□ 1.94
PCOLCE-205ENST00000472348 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
PCOLCE-205ENST00000472348 TRIM41Q8WV44 630 aa27.17■■□□□ 1.94
PCOLCE-205ENST00000472348 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
PCOLCE-205ENST00000472348 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
PCOLCE-205ENST00000472348 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
PCOLCE-205ENST00000472348 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
PCOLCE-205ENST00000472348 EIF4G3O43432 1585 aaKnown RBP26.96■■□□□ 1.91
PCOLCE-205ENST00000472348 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
PCOLCE-205ENST00000472348 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
PCOLCE-205ENST00000472348 EEA1Q15075 1411 aa26.91■■□□□ 1.9
PCOLCE-205ENST00000472348 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
PCOLCE-205ENST00000472348 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
PCOLCE-205ENST00000472348 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
PCOLCE-205ENST00000472348 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
PCOLCE-205ENST00000472348 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
PCOLCE-205ENST00000472348 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.892e-9■■■■□ 22.4
PCOLCE-205ENST00000472348 MAGI1Q96QZ7 1491 aaPredicted RBP26.78■■□□□ 1.88
PCOLCE-205ENST00000472348 CUL7Q14999 1698 aa26.76■■□□□ 1.87
PCOLCE-205ENST00000472348 IGF1RP08069 1367 aa26.72■■□□□ 1.87
PCOLCE-205ENST00000472348 RUSC2Q8N2Y8 1516 aa26.71■■□□□ 1.87
PCOLCE-205ENST00000472348 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
PCOLCE-205ENST00000472348 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
PCOLCE-205ENST00000472348 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
PCOLCE-205ENST00000472348 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
PCOLCE-205ENST00000472348 CSRNP3Q8WYN3 585 aa26.62■■□□□ 1.85
PCOLCE-205ENST00000472348 PRXQ9BXM0 1461 aa26.59■■□□□ 1.85
PCOLCE-205ENST00000472348 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.84
PCOLCE-205ENST00000472348 KIF21BO75037 1637 aa26.54■■□□□ 1.84
PCOLCE-205ENST00000472348 RAPGEF2Q9Y4G8 1499 aa26.52■■□□□ 1.84
PCOLCE-205ENST00000472348 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
PCOLCE-205ENST00000472348 CHD1O14646 1710 aa26.51■■□□□ 1.83
PCOLCE-205ENST00000472348 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
PCOLCE-205ENST00000472348 CHMP7Q8WUX9 453 aaPredicted RBP26.45■■□□□ 1.82
PCOLCE-205ENST00000472348 NUP160Q12769 1436 aa26.39■■□□□ 1.82
PCOLCE-205ENST00000472348 FBLN2P98095 1184 aa26.38■■□□□ 1.81
PCOLCE-205ENST00000472348 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
PCOLCE-205ENST00000472348 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
PCOLCE-205ENST00000472348 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
PCOLCE-205ENST00000472348 CTTNBP2Q8WZ74 1663 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms