RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
PMPCB-206ENST00000456433 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
PMPCB-206ENST00000456433 ABCC9O60706 1549 aa35.16■■■■□ 3.22
PMPCB-206ENST00000456433 ZCCHC6Q5VYS8 1495 aaKnown RBP34.32■■■■□ 3.08
PMPCB-206ENST00000456433 NACADO15069 1562 aa34.15■■■■□ 3.06
PMPCB-206ENST00000456433 MYO15BQ96JP2 1530 aa34.12■■■■□ 3.05
PMPCB-206ENST00000456433 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
PMPCB-206ENST00000456433 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.05
PMPCB-206ENST00000456433 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
PMPCB-206ENST00000456433 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
PMPCB-206ENST00000456433 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
PMPCB-206ENST00000456433 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
PMPCB-206ENST00000456433 PABPN1Q86U42 306 aaKnown RBP eCLIP32.87■■■□□ 2.85
PMPCB-206ENST00000456433 SHROOM4Q9ULL8 1493 aa32.81■■■□□ 2.84
PMPCB-206ENST00000456433 EIF4G1Q04637 1599 aaKnown RBP32.12■■■□□ 2.73
PMPCB-206ENST00000456433 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
PMPCB-206ENST00000456433 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
PMPCB-206ENST00000456433 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
PMPCB-206ENST00000456433 BAZ1AQ9NRL2 1556 aaPredicted RBP31.82■■■□□ 2.68
PMPCB-206ENST00000456433 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
PMPCB-206ENST00000456433 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
PMPCB-206ENST00000456433 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
PMPCB-206ENST00000456433 SMARCA2P51531 1590 aa31.54■■■□□ 2.64
PMPCB-206ENST00000456433 ATAD2BQ9ULI0 1458 aa31.53■■■□□ 2.64
PMPCB-206ENST00000456433 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
PMPCB-206ENST00000456433 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
PMPCB-206ENST00000456433 HMGXB3Q12766 1538 aa31.39■■■□□ 2.62
PMPCB-206ENST00000456433 WIZO95785 1651 aa31.29■■■□□ 2.6
PMPCB-206ENST00000456433 BAZ1BQ9UIG0 1483 aaKnown RBP31.27■■■□□ 2.6
PMPCB-206ENST00000456433 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
PMPCB-206ENST00000456433 SUPT5HO00267 1087 aaKnown RBP30.72■■■□□ 2.51
PMPCB-206ENST00000456433 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
PMPCB-206ENST00000456433 LAMC3Q9Y6N6 1575 aa30.61■■■□□ 2.49
PMPCB-206ENST00000456433 CADPSQ9ULU8 1353 aa30.56■■■□□ 2.48
PMPCB-206ENST00000456433 NESP48681 1621 aa30.55■■■□□ 2.48
PMPCB-206ENST00000456433 CFTRP13569 1480 aa30.48■■■□□ 2.47
PMPCB-206ENST00000456433 PDS5BQ9NTI5 1447 aa30.36■■■□□ 2.45
PMPCB-206ENST00000456433 PRDM2Q13029 1718 aa30.32■■■□□ 2.44
PMPCB-206ENST00000456433 ERCC6Q03468 1493 aa30.29■■■□□ 2.44
PMPCB-206ENST00000456433 KIF21AQ7Z4S6 1674 aa30.24■■■□□ 2.43
PMPCB-206ENST00000456433 FANCD2Q9BXW9 1451 aa30.19■■■□□ 2.42
PMPCB-206ENST00000456433 CEP164Q9UPV0 1460 aa30.13■■■□□ 2.41
PMPCB-206ENST00000456433 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
PMPCB-206ENST00000456433 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
PMPCB-206ENST00000456433 WDR62O43379 1518 aa29.96■■■□□ 2.39
PMPCB-206ENST00000456433 CUX2O14529 1486 aa29.93■■■□□ 2.38
PMPCB-206ENST00000456433 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
PMPCB-206ENST00000456433 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
PMPCB-206ENST00000456433 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
PMPCB-206ENST00000456433 TOPBP1Q92547 1522 aa29.76■■■□□ 2.36
PMPCB-206ENST00000456433 CUX1P39880 1505 aa29.66■■■□□ 2.34
PMPCB-206ENST00000456433 WRNQ14191 1432 aaPredicted RBP eCLIP29.59■■■□□ 2.33
PMPCB-206ENST00000456433 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
PMPCB-206ENST00000456433 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
PMPCB-206ENST00000456433 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
PMPCB-206ENST00000456433 SYNJ1O43426 1573 aa29.51■■■□□ 2.31
PMPCB-206ENST00000456433 IFT140Q96RY7 1462 aa29.5■■■□□ 2.31
PMPCB-206ENST00000456433 FGD5Q6ZNL6 1462 aa29.49■■■□□ 2.31
PMPCB-206ENST00000456433 TARBP1Q13395 1621 aaKnown RBP29.44■■■□□ 2.3
PMPCB-206ENST00000456433 SOGA1O94964 1423 aa29.38■■■□□ 2.29
PMPCB-206ENST00000456433 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
PMPCB-206ENST00000456433 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
PMPCB-206ENST00000456433 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
PMPCB-206ENST00000456433 ABCA10Q8WWZ4 1543 aa29.28■■■□□ 2.28
PMPCB-206ENST00000456433 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
PMPCB-206ENST00000456433 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.263e-6■■■□□ 17
PMPCB-206ENST00000456433 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
PMPCB-206ENST00000456433 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
PMPCB-206ENST00000456433 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
PMPCB-206ENST00000456433 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
PMPCB-206ENST00000456433 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
PMPCB-206ENST00000456433 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
PMPCB-206ENST00000456433 KIF27Q86VH2 1401 aa28.95■■■□□ 2.23
PMPCB-206ENST00000456433 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
PMPCB-206ENST00000456433 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
PMPCB-206ENST00000456433 MAGI1Q96QZ7 1491 aaPredicted RBP28.95■■■□□ 2.22
PMPCB-206ENST00000456433 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
PMPCB-206ENST00000456433 SNAPC4Q5SXM2 1469 aa28.92■■■□□ 2.22
PMPCB-206ENST00000456433 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
PMPCB-206ENST00000456433 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
PMPCB-206ENST00000456433 CHD1O14646 1710 aa28.79■■■□□ 2.2
PMPCB-206ENST00000456433 IGF1RP08069 1367 aa28.78■■■□□ 2.2
PMPCB-206ENST00000456433 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
PMPCB-206ENST00000456433 CUL7Q14999 1698 aa28.74■■■□□ 2.19
PMPCB-206ENST00000456433 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
PMPCB-206ENST00000456433 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
PMPCB-206ENST00000456433 OSCARQ8IYS5 282 aa28.67■■■□□ 2.18
PMPCB-206ENST00000456433 EEA1Q15075 1411 aa28.67■■■□□ 2.18
PMPCB-206ENST00000456433 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
PMPCB-206ENST00000456433 FBLN2P98095 1184 aa28.65■■■□□ 2.18
PMPCB-206ENST00000456433 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
PMPCB-206ENST00000456433 NUP160Q12769 1436 aa28.55■■■□□ 2.16
PMPCB-206ENST00000456433 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
PMPCB-206ENST00000456433 PRXQ9BXM0 1461 aa28.52■■■□□ 2.16
PMPCB-206ENST00000456433 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
PMPCB-206ENST00000456433 RAPGEF2Q9Y4G8 1499 aa28.5■■■□□ 2.15
PMPCB-206ENST00000456433 CSRNP3Q8WYN3 585 aa28.49■■■□□ 2.15
PMPCB-206ENST00000456433 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
PMPCB-206ENST00000456433 KIF21BO75037 1637 aa28.35■■■□□ 2.13
PMPCB-206ENST00000456433 KIAA0586Q9BVV6 1533 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms