RNA–Protein interactions for RNA: ENST00000366783.7

PSEN2-202, Transcript of presenilin 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PSEN2, Length 2,306 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-202ENST00000366783 NISCHQ9Y2I1 1504 aa30.52■■■□□ 2.48
PSEN2-202ENST00000366783 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.76
PSEN2-202ENST00000366783 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
PSEN2-202ENST00000366783 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
PSEN2-202ENST00000366783 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
PSEN2-202ENST00000366783 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
PSEN2-202ENST00000366783 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
PSEN2-202ENST00000366783 ABCC9O60706 1549 aa24.53■■□□□ 1.52
PSEN2-202ENST00000366783 SCRIBQ14160 1630 aa24.48■■□□□ 1.51
PSEN2-202ENST00000366783 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
PSEN2-202ENST00000366783 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
PSEN2-202ENST00000366783 NACADO15069 1562 aa24.14■■□□□ 1.45
PSEN2-202ENST00000366783 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
PSEN2-202ENST00000366783 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
PSEN2-202ENST00000366783 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
PSEN2-202ENST00000366783 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
PSEN2-202ENST00000366783 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
PSEN2-202ENST00000366783 WIZO95785 1651 aa23.63■■□□□ 1.37
PSEN2-202ENST00000366783 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
PSEN2-202ENST00000366783 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
PSEN2-202ENST00000366783 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
PSEN2-202ENST00000366783 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
PSEN2-202ENST00000366783 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
PSEN2-202ENST00000366783 PCGF6Q9BYE7 350 aa23.44■■□□□ 1.34
PSEN2-202ENST00000366783 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
PSEN2-202ENST00000366783 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
PSEN2-202ENST00000366783 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
PSEN2-202ENST00000366783 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
PSEN2-202ENST00000366783 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.3
PSEN2-202ENST00000366783 HRCP23327 699 aa23.14■■□□□ 1.29
PSEN2-202ENST00000366783 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
PSEN2-202ENST00000366783 SMARCA2P51531 1590 aa23.08■■□□□ 1.28
PSEN2-202ENST00000366783 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
PSEN2-202ENST00000366783 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
PSEN2-202ENST00000366783 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
PSEN2-202ENST00000366783 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
PSEN2-202ENST00000366783 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
PSEN2-202ENST00000366783 SOGA1O94964 1423 aa22.76■■□□□ 1.23
PSEN2-202ENST00000366783 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
PSEN2-202ENST00000366783 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
PSEN2-202ENST00000366783 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
PSEN2-202ENST00000366783 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.2
PSEN2-202ENST00000366783 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
PSEN2-202ENST00000366783 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
PSEN2-202ENST00000366783 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
PSEN2-202ENST00000366783 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
PSEN2-202ENST00000366783 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
PSEN2-202ENST00000366783 EEA1Q15075 1411 aa22.44■■□□□ 1.18
PSEN2-202ENST00000366783 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
PSEN2-202ENST00000366783 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
PSEN2-202ENST00000366783 GOLGA3Q08378 1498 aa22.35■■□□□ 1.17
PSEN2-202ENST00000366783 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
PSEN2-202ENST00000366783 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
PSEN2-202ENST00000366783 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
PSEN2-202ENST00000366783 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
PSEN2-202ENST00000366783 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
PSEN2-202ENST00000366783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
PSEN2-202ENST00000366783 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
PSEN2-202ENST00000366783 KIF21BO75037 1637 aa22.18■■□□□ 1.14
PSEN2-202ENST00000366783 CUX1P39880 1505 aa22.14■■□□□ 1.13
PSEN2-202ENST00000366783 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
PSEN2-202ENST00000366783 CLIP1P30622 1438 aa22.12■■□□□ 1.13
PSEN2-202ENST00000366783 CFTRP13569 1480 aa22.12■■□□□ 1.13
PSEN2-202ENST00000366783 CCER1Q8TC90 406 aaPredicted RBP22.1■■□□□ 1.13
PSEN2-202ENST00000366783 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
PSEN2-202ENST00000366783 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
PSEN2-202ENST00000366783 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
PSEN2-202ENST00000366783 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
PSEN2-202ENST00000366783 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
PSEN2-202ENST00000366783 APLP2Q06481 763 aa21.91■■□□□ 1.1
PSEN2-202ENST00000366783 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.1
PSEN2-202ENST00000366783 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
PSEN2-202ENST00000366783 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
PSEN2-202ENST00000366783 CUX2O14529 1486 aa21.84■■□□□ 1.09
PSEN2-202ENST00000366783 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
PSEN2-202ENST00000366783 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
PSEN2-202ENST00000366783 NESP48681 1621 aa21.78■■□□□ 1.08
PSEN2-202ENST00000366783 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
PSEN2-202ENST00000366783 IGF1RP08069 1367 aa21.76■■□□□ 1.07
PSEN2-202ENST00000366783 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
PSEN2-202ENST00000366783 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
PSEN2-202ENST00000366783 MYT1Q01538 1121 aa21.7■■□□□ 1.06
PSEN2-202ENST00000366783 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
PSEN2-202ENST00000366783 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
PSEN2-202ENST00000366783 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
PSEN2-202ENST00000366783 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
PSEN2-202ENST00000366783 TOPBP1Q92547 1522 aa21.58■■□□□ 1.05
PSEN2-202ENST00000366783 P3H3Q8IVL6 736 aa21.57■■□□□ 1.04
PSEN2-202ENST00000366783 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
PSEN2-202ENST00000366783 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
PSEN2-202ENST00000366783 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
PSEN2-202ENST00000366783 ITGAEP38570 1179 aa21.47■■□□□ 1.03
PSEN2-202ENST00000366783 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
PSEN2-202ENST00000366783 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
PSEN2-202ENST00000366783 DIEXFQ68CQ4 756 aaKnown RBP21.46■■□□□ 1.03
PSEN2-202ENST00000366783 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
PSEN2-202ENST00000366783 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
PSEN2-202ENST00000366783 FHOD3Q2V2M9 1422 aa21.37■■□□□ 1.01
PSEN2-202ENST00000366783 RRBP1Q9P2E9 1410 aaKnown RBP21.37■■□□□ 1.01
PSEN2-202ENST00000366783 ZNF316A6NFI3 1004 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms