RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 NISCHQ9Y2I1 1504 aa30.08■■■□□ 2.41
PSEN2-201ENST00000366782 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
PSEN2-201ENST00000366782 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
PSEN2-201ENST00000366782 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.67
PSEN2-201ENST00000366782 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
PSEN2-201ENST00000366782 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
PSEN2-201ENST00000366782 DCAF1Q9Y4B6 1507 aa24.65■■□□□ 1.54
PSEN2-201ENST00000366782 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
PSEN2-201ENST00000366782 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
PSEN2-201ENST00000366782 ABCC9O60706 1549 aa24■■□□□ 1.43
PSEN2-201ENST00000366782 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
PSEN2-201ENST00000366782 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.41
PSEN2-201ENST00000366782 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.4
PSEN2-201ENST00000366782 HRCP23327 699 aa23.76■■□□□ 1.39
PSEN2-201ENST00000366782 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
PSEN2-201ENST00000366782 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
PSEN2-201ENST00000366782 NACADO15069 1562 aa23.59■■□□□ 1.37
PSEN2-201ENST00000366782 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
PSEN2-201ENST00000366782 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
PSEN2-201ENST00000366782 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
PSEN2-201ENST00000366782 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
PSEN2-201ENST00000366782 WIZO95785 1651 aa23.3■■□□□ 1.32
PSEN2-201ENST00000366782 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
PSEN2-201ENST00000366782 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
PSEN2-201ENST00000366782 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
PSEN2-201ENST00000366782 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
PSEN2-201ENST00000366782 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
PSEN2-201ENST00000366782 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
PSEN2-201ENST00000366782 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
PSEN2-201ENST00000366782 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
PSEN2-201ENST00000366782 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.24
PSEN2-201ENST00000366782 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
PSEN2-201ENST00000366782 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
PSEN2-201ENST00000366782 ZEB1P37275 1124 aaPredicted RBP22.69■■□□□ 1.22
PSEN2-201ENST00000366782 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
PSEN2-201ENST00000366782 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
PSEN2-201ENST00000366782 SOGA1O94964 1423 aa22.58■■□□□ 1.21
PSEN2-201ENST00000366782 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
PSEN2-201ENST00000366782 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
PSEN2-201ENST00000366782 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
PSEN2-201ENST00000366782 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
PSEN2-201ENST00000366782 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
PSEN2-201ENST00000366782 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.18
PSEN2-201ENST00000366782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
PSEN2-201ENST00000366782 EEA1Q15075 1411 aa22.36■■□□□ 1.17
PSEN2-201ENST00000366782 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.17
PSEN2-201ENST00000366782 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
PSEN2-201ENST00000366782 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
PSEN2-201ENST00000366782 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
PSEN2-201ENST00000366782 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
PSEN2-201ENST00000366782 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
PSEN2-201ENST00000366782 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
PSEN2-201ENST00000366782 GOLGA3Q08378 1498 aa22.24■■□□□ 1.15
PSEN2-201ENST00000366782 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
PSEN2-201ENST00000366782 KIF21BO75037 1637 aa22.11■■□□□ 1.13
PSEN2-201ENST00000366782 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
PSEN2-201ENST00000366782 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.11
PSEN2-201ENST00000366782 CLIP1P30622 1438 aa22■■□□□ 1.11
PSEN2-201ENST00000366782 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
PSEN2-201ENST00000366782 VPS8Q8N3P4 1428 aa21.91■■□□□ 1.1
PSEN2-201ENST00000366782 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
PSEN2-201ENST00000366782 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
PSEN2-201ENST00000366782 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
PSEN2-201ENST00000366782 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
PSEN2-201ENST00000366782 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
PSEN2-201ENST00000366782 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
PSEN2-201ENST00000366782 CUX1P39880 1505 aa21.79■■□□□ 1.08
PSEN2-201ENST00000366782 PRXQ9BXM0 1461 aa21.78■■□□□ 1.08
PSEN2-201ENST00000366782 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
PSEN2-201ENST00000366782 APLP2Q06481 763 aa21.73■■□□□ 1.07
PSEN2-201ENST00000366782 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
PSEN2-201ENST00000366782 CFTRP13569 1480 aa21.7■■□□□ 1.06
PSEN2-201ENST00000366782 NEUROD1Q13562 356 aa21.7■■□□□ 1.06
PSEN2-201ENST00000366782 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
PSEN2-201ENST00000366782 ZNF316A6NFI3 1004 aaPredicted RBP21.69■■□□□ 1.06
PSEN2-201ENST00000366782 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
PSEN2-201ENST00000366782 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
PSEN2-201ENST00000366782 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
PSEN2-201ENST00000366782 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
PSEN2-201ENST00000366782 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
PSEN2-201ENST00000366782 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
PSEN2-201ENST00000366782 IGF1RP08069 1367 aa21.45■■□□□ 1.02
PSEN2-201ENST00000366782 CUX2O14529 1486 aa21.45■■□□□ 1.02
PSEN2-201ENST00000366782 DHX57Q6P158 1386 aaKnown RBP21.44■■□□□ 1.02
PSEN2-201ENST00000366782 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
PSEN2-201ENST00000366782 MIER1Q8N108 512 aa21.43■■□□□ 1.02
PSEN2-201ENST00000366782 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
PSEN2-201ENST00000366782 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
PSEN2-201ENST00000366782 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
PSEN2-201ENST00000366782 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
PSEN2-201ENST00000366782 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1.01
PSEN2-201ENST00000366782 MYT1Q01538 1121 aa21.32■■□□□ 1
PSEN2-201ENST00000366782 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
PSEN2-201ENST00000366782 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
PSEN2-201ENST00000366782 ITGAEP38570 1179 aa21.25■□□□□ 0.99
PSEN2-201ENST00000366782 TIAM1Q13009 1591 aa21.25■□□□□ 0.99
PSEN2-201ENST00000366782 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
PSEN2-201ENST00000366782 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
PSEN2-201ENST00000366782 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
PSEN2-201ENST00000366782 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms