RNA–Protein interactions for RNA: ENST00000375345.3

APOC3-202, Transcript of apolipoprotein C3, humanhuman

TSL 5 BASIC

Gene APOC3, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-202ENST00000375345 NISCHQ9Y2I1 1504 aa37.45■■■■□ 3.59
APOC3-202ENST00000375345 CCDC180Q9P1Z9 1646 aa33.81■■■■□ 3
APOC3-202ENST00000375345 ABCC9O60706 1549 aa33.7■■■□□ 2.99
APOC3-202ENST00000375345 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
APOC3-202ENST00000375345 NACADO15069 1562 aa31.94■■■□□ 2.7
APOC3-202ENST00000375345 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
APOC3-202ENST00000375345 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
APOC3-202ENST00000375345 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
APOC3-202ENST00000375345 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
APOC3-202ENST00000375345 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
APOC3-202ENST00000375345 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
APOC3-202ENST00000375345 ZCCHC6Q5VYS8 1495 aaKnown RBP31.03■■■□□ 2.56
APOC3-202ENST00000375345 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
APOC3-202ENST00000375345 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
APOC3-202ENST00000375345 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
APOC3-202ENST00000375345 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
APOC3-202ENST00000375345 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
APOC3-202ENST00000375345 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
APOC3-202ENST00000375345 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
APOC3-202ENST00000375345 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
APOC3-202ENST00000375345 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
APOC3-202ENST00000375345 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
APOC3-202ENST00000375345 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
APOC3-202ENST00000375345 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
APOC3-202ENST00000375345 CUX2O14529 1486 aa29.23■■■□□ 2.27
APOC3-202ENST00000375345 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
APOC3-202ENST00000375345 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
APOC3-202ENST00000375345 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
APOC3-202ENST00000375345 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.24
APOC3-202ENST00000375345 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
APOC3-202ENST00000375345 NESP48681 1621 aa28.86■■■□□ 2.21
APOC3-202ENST00000375345 MROH2BQ7Z745 1585 aa28.78■■■□□ 2.2
APOC3-202ENST00000375345 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
APOC3-202ENST00000375345 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
APOC3-202ENST00000375345 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
APOC3-202ENST00000375345 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
APOC3-202ENST00000375345 WIZO95785 1651 aa28.47■■■□□ 2.15
APOC3-202ENST00000375345 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
APOC3-202ENST00000375345 WDR62O43379 1518 aa28.33■■■□□ 2.13
APOC3-202ENST00000375345 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
APOC3-202ENST00000375345 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
APOC3-202ENST00000375345 TOP2AP11388 1531 aaKnown RBP28.19■■■□□ 2.1
APOC3-202ENST00000375345 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
APOC3-202ENST00000375345 CFTRP13569 1480 aa28.15■■■□□ 2.1
APOC3-202ENST00000375345 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
APOC3-202ENST00000375345 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
APOC3-202ENST00000375345 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
APOC3-202ENST00000375345 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
APOC3-202ENST00000375345 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.04
APOC3-202ENST00000375345 IFT140Q96RY7 1462 aa27.73■■■□□ 2.03
APOC3-202ENST00000375345 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
APOC3-202ENST00000375345 TOPBP1Q92547 1522 aa27.63■■■□□ 2.01
APOC3-202ENST00000375345 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
APOC3-202ENST00000375345 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
APOC3-202ENST00000375345 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
APOC3-202ENST00000375345 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.98
APOC3-202ENST00000375345 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.98
APOC3-202ENST00000375345 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.98
APOC3-202ENST00000375345 TARBP1Q13395 1621 aaKnown RBP27.39■■□□□ 1.98
APOC3-202ENST00000375345 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
APOC3-202ENST00000375345 POLA1P09884 1462 aaPredicted RBP27.34■■□□□ 1.97
APOC3-202ENST00000375345 CHD1O14646 1710 aa27.33■■□□□ 1.97
APOC3-202ENST00000375345 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
APOC3-202ENST00000375345 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.961e-7■■■■□ 26.6
APOC3-202ENST00000375345 SOGA1O94964 1423 aa27.22■■□□□ 1.95
APOC3-202ENST00000375345 FBLN2P98095 1184 aa27.21■■□□□ 1.95
APOC3-202ENST00000375345 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
APOC3-202ENST00000375345 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
APOC3-202ENST00000375345 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
APOC3-202ENST00000375345 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
APOC3-202ENST00000375345 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
APOC3-202ENST00000375345 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
APOC3-202ENST00000375345 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
APOC3-202ENST00000375345 CUX1P39880 1505 aa27.07■■□□□ 1.92
APOC3-202ENST00000375345 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
APOC3-202ENST00000375345 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
APOC3-202ENST00000375345 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
APOC3-202ENST00000375345 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
APOC3-202ENST00000375345 CLASP1Q7Z460 1538 aa26.97■■□□□ 1.91
APOC3-202ENST00000375345 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
APOC3-202ENST00000375345 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
APOC3-202ENST00000375345 TRHP20396 242 aaPredicted RBP26.91■■□□□ 1.9
APOC3-202ENST00000375345 ABCA10Q8WWZ4 1543 aa26.88■■□□□ 1.89
APOC3-202ENST00000375345 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
APOC3-202ENST00000375345 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
APOC3-202ENST00000375345 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
APOC3-202ENST00000375345 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
APOC3-202ENST00000375345 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
APOC3-202ENST00000375345 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
APOC3-202ENST00000375345 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
APOC3-202ENST00000375345 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
APOC3-202ENST00000375345 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
APOC3-202ENST00000375345 NUP160Q12769 1436 aa26.56■■□□□ 1.84
APOC3-202ENST00000375345 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
APOC3-202ENST00000375345 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
APOC3-202ENST00000375345 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
APOC3-202ENST00000375345 PRG4Q92954 1404 aaPredicted RBP26.32■■□□□ 1.8
APOC3-202ENST00000375345 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
APOC3-202ENST00000375345 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
APOC3-202ENST00000375345 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms