RNA–Protein interactions for RNA: ENST00000477544.5

SARS-205, Transcript of seryl-tRNA synthetase, humanhuman

TSL 2

Gene SARS, Length 694 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS-205ENST00000477544 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
SARS-205ENST00000477544 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
SARS-205ENST00000477544 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
SARS-205ENST00000477544 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
SARS-205ENST00000477544 ABCC9O60706 1549 aa22.32■■□□□ 1.16
SARS-205ENST00000477544 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
SARS-205ENST00000477544 NACADO15069 1562 aa21.36■■□□□ 1.01
SARS-205ENST00000477544 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
SARS-205ENST00000477544 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
SARS-205ENST00000477544 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.98
SARS-205ENST00000477544 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
SARS-205ENST00000477544 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
SARS-205ENST00000477544 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
SARS-205ENST00000477544 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
SARS-205ENST00000477544 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
SARS-205ENST00000477544 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
SARS-205ENST00000477544 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
SARS-205ENST00000477544 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
SARS-205ENST00000477544 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
SARS-205ENST00000477544 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
SARS-205ENST00000477544 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
SARS-205ENST00000477544 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
SARS-205ENST00000477544 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
SARS-205ENST00000477544 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
SARS-205ENST00000477544 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
SARS-205ENST00000477544 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
SARS-205ENST00000477544 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SARS-205ENST00000477544 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
SARS-205ENST00000477544 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
SARS-205ENST00000477544 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
SARS-205ENST00000477544 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
SARS-205ENST00000477544 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
SARS-205ENST00000477544 WIZO95785 1651 aa19.36■□□□□ 0.69
SARS-205ENST00000477544 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
SARS-205ENST00000477544 NESP48681 1621 aa19.28■□□□□ 0.68
SARS-205ENST00000477544 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
SARS-205ENST00000477544 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
SARS-205ENST00000477544 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
SARS-205ENST00000477544 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
SARS-205ENST00000477544 CUX2O14529 1486 aa19.11■□□□□ 0.65
SARS-205ENST00000477544 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
SARS-205ENST00000477544 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
SARS-205ENST00000477544 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
SARS-205ENST00000477544 CFTRP13569 1480 aa19■□□□□ 0.63
SARS-205ENST00000477544 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
SARS-205ENST00000477544 CCDC88BA6NC98 1476 aa18.95■□□□□ 0.62
SARS-205ENST00000477544 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
SARS-205ENST00000477544 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
SARS-205ENST00000477544 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
SARS-205ENST00000477544 FOXD1Q16676 465 aa18.86■□□□□ 0.61
SARS-205ENST00000477544 WDR62O43379 1518 aa18.84■□□□□ 0.61
SARS-205ENST00000477544 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
SARS-205ENST00000477544 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
SARS-205ENST00000477544 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
SARS-205ENST00000477544 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
SARS-205ENST00000477544 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
SARS-205ENST00000477544 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
SARS-205ENST00000477544 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
SARS-205ENST00000477544 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
SARS-205ENST00000477544 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
SARS-205ENST00000477544 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
SARS-205ENST00000477544 CUX1P39880 1505 aa18.39■□□□□ 0.53
SARS-205ENST00000477544 SOGA1O94964 1423 aa18.36■□□□□ 0.53
SARS-205ENST00000477544 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
SARS-205ENST00000477544 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
SARS-205ENST00000477544 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
SARS-205ENST00000477544 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
SARS-205ENST00000477544 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.521e-7■■■■□ 23.4
SARS-205ENST00000477544 ADRA2BP18089 450 aa18.32■□□□□ 0.52
SARS-205ENST00000477544 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
SARS-205ENST00000477544 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
SARS-205ENST00000477544 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
SARS-205ENST00000477544 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SARS-205ENST00000477544 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
SARS-205ENST00000477544 BIVM-ERCC5R4GMW8 1640 aa18.18■□□□□ 0.5
SARS-205ENST00000477544 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
SARS-205ENST00000477544 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
SARS-205ENST00000477544 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
SARS-205ENST00000477544 FBLN2P98095 1184 aa18.14■□□□□ 0.49
SARS-205ENST00000477544 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
SARS-205ENST00000477544 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
SARS-205ENST00000477544 CHD1O14646 1710 aa18.12■□□□□ 0.49
SARS-205ENST00000477544 MAGI1Q96QZ7 1491 aaPredicted RBP18.11■□□□□ 0.49
SARS-205ENST00000477544 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
SARS-205ENST00000477544 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
SARS-205ENST00000477544 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
SARS-205ENST00000477544 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
SARS-205ENST00000477544 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
SARS-205ENST00000477544 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
SARS-205ENST00000477544 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
SARS-205ENST00000477544 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
SARS-205ENST00000477544 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
SARS-205ENST00000477544 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
SARS-205ENST00000477544 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
SARS-205ENST00000477544 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
SARS-205ENST00000477544 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
SARS-205ENST00000477544 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
SARS-205ENST00000477544 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
SARS-205ENST00000477544 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
SARS-205ENST00000477544 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms