RNA–Protein interactions for RNA: ENST00000472139.2

PSEN2-206, Transcript of presenilin 2, humanhuman

TSL 5 BASIC

Gene PSEN2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-206ENST00000472139 NISCHQ9Y2I1 1504 aa39.36■■■■□ 3.89
PSEN2-206ENST00000472139 ABCC9O60706 1549 aa35.35■■■■□ 3.25
PSEN2-206ENST00000472139 CCDC180Q9P1Z9 1646 aa35.33■■■■□ 3.25
PSEN2-206ENST00000472139 RB1CC1Q8TDY2 1594 aa33.61■■■□□ 2.97
PSEN2-206ENST00000472139 NACADO15069 1562 aa33.35■■■□□ 2.93
PSEN2-206ENST00000472139 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
PSEN2-206ENST00000472139 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
PSEN2-206ENST00000472139 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
PSEN2-206ENST00000472139 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
PSEN2-206ENST00000472139 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.85
PSEN2-206ENST00000472139 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
PSEN2-206ENST00000472139 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
PSEN2-206ENST00000472139 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.78
PSEN2-206ENST00000472139 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
PSEN2-206ENST00000472139 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
PSEN2-206ENST00000472139 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
PSEN2-206ENST00000472139 EIF4G1Q04637 1599 aaKnown RBP31.84■■■□□ 2.69
PSEN2-206ENST00000472139 CECR2Q9BXF3 1484 aa31.79■■■□□ 2.68
PSEN2-206ENST00000472139 NCAPD3P42695 1498 aa30.76■■■□□ 2.52
PSEN2-206ENST00000472139 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
PSEN2-206ENST00000472139 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
PSEN2-206ENST00000472139 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
PSEN2-206ENST00000472139 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
PSEN2-206ENST00000472139 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
PSEN2-206ENST00000472139 ERCC6Q03468 1493 aa30.49■■■□□ 2.47
PSEN2-206ENST00000472139 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
PSEN2-206ENST00000472139 NESP48681 1621 aa30.39■■■□□ 2.46
PSEN2-206ENST00000472139 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
PSEN2-206ENST00000472139 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
PSEN2-206ENST00000472139 CUX2O14529 1486 aa30.36■■■□□ 2.45
PSEN2-206ENST00000472139 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
PSEN2-206ENST00000472139 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
PSEN2-206ENST00000472139 WIZO95785 1651 aa30.07■■■□□ 2.41
PSEN2-206ENST00000472139 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
PSEN2-206ENST00000472139 THOC2Q8NI27 1593 aaKnown RBP30.04■■■□□ 2.4
PSEN2-206ENST00000472139 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
PSEN2-206ENST00000472139 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
PSEN2-206ENST00000472139 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
PSEN2-206ENST00000472139 MRC2Q9UBG0 1479 aa29.68■■■□□ 2.34
PSEN2-206ENST00000472139 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
PSEN2-206ENST00000472139 WDR62O43379 1518 aa29.6■■■□□ 2.33
PSEN2-206ENST00000472139 CEP164Q9UPV0 1460 aa29.58■■■□□ 2.33
PSEN2-206ENST00000472139 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
PSEN2-206ENST00000472139 CFTRP13569 1480 aa29.52■■■□□ 2.32
PSEN2-206ENST00000472139 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
PSEN2-206ENST00000472139 URB2Q14146 1524 aaKnown RBP29.32■■■□□ 2.28
PSEN2-206ENST00000472139 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
PSEN2-206ENST00000472139 TRIM41Q8WV44 630 aa29.11■■■□□ 2.25
PSEN2-206ENST00000472139 OSCARQ8IYS5 282 aa29.01■■■□□ 2.23
PSEN2-206ENST00000472139 TOPBP1Q92547 1522 aa29■■■□□ 2.23
PSEN2-206ENST00000472139 ZNF608Q9ULD9 1512 aaPredicted RBP28.97■■■□□ 2.23
PSEN2-206ENST00000472139 IFT140Q96RY7 1462 aa28.96■■■□□ 2.23
PSEN2-206ENST00000472139 DNMBPQ6XZF7 1577 aa28.9■■■□□ 2.22
PSEN2-206ENST00000472139 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
PSEN2-206ENST00000472139 EIF4G3O43432 1585 aaKnown RBP28.82■■■□□ 2.2
PSEN2-206ENST00000472139 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.2
PSEN2-206ENST00000472139 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.19
PSEN2-206ENST00000472139 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
PSEN2-206ENST00000472139 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
PSEN2-206ENST00000472139 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
PSEN2-206ENST00000472139 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.18
PSEN2-206ENST00000472139 CHD1O14646 1710 aa28.67■■■□□ 2.18
PSEN2-206ENST00000472139 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.17
PSEN2-206ENST00000472139 SOGA1O94964 1423 aa28.58■■■□□ 2.17
PSEN2-206ENST00000472139 ARHGEF11O15085 1522 aa28.56■■■□□ 2.16
PSEN2-206ENST00000472139 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
PSEN2-206ENST00000472139 FBLN2P98095 1184 aa28.55■■■□□ 2.16
PSEN2-206ENST00000472139 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
PSEN2-206ENST00000472139 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
PSEN2-206ENST00000472139 CUX1P39880 1505 aa28.53■■■□□ 2.16
PSEN2-206ENST00000472139 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
PSEN2-206ENST00000472139 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
PSEN2-206ENST00000472139 CYB5RLQ6IPT4 315 aa28.38■■■□□ 2.13
PSEN2-206ENST00000472139 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
PSEN2-206ENST00000472139 GRIN2BQ13224 1484 aa28.3■■■□□ 2.12
PSEN2-206ENST00000472139 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
PSEN2-206ENST00000472139 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
PSEN2-206ENST00000472139 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
PSEN2-206ENST00000472139 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
PSEN2-206ENST00000472139 GAPVD1Q14C86 1478 aa28.23■■■□□ 2.11
PSEN2-206ENST00000472139 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
PSEN2-206ENST00000472139 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
PSEN2-206ENST00000472139 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
PSEN2-206ENST00000472139 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
PSEN2-206ENST00000472139 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
PSEN2-206ENST00000472139 TRHP20396 242 aaPredicted RBP28.08■■■□□ 2.09
PSEN2-206ENST00000472139 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
PSEN2-206ENST00000472139 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
PSEN2-206ENST00000472139 ADAMTS12P58397 1594 aa27.97■■■□□ 2.07
PSEN2-206ENST00000472139 GRIN2AQ12879 1464 aa27.95■■■□□ 2.06
PSEN2-206ENST00000472139 CEP170Q5SW79 1584 aa27.89■■■□□ 2.05
PSEN2-206ENST00000472139 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
PSEN2-206ENST00000472139 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
PSEN2-206ENST00000472139 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
PSEN2-206ENST00000472139 NUP160Q12769 1436 aa27.83■■■□□ 2.05
PSEN2-206ENST00000472139 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
PSEN2-206ENST00000472139 PRG4Q92954 1404 aaPredicted RBP27.59■■■□□ 2.01
PSEN2-206ENST00000472139 JPH4Q96JJ6 628 aa27.58■■■□□ 2.01
PSEN2-206ENST00000472139 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
PSEN2-206ENST00000472139 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms