RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 NISCHQ9Y2I1 1504 aa34■■■■□ 3.03
NME1-NME2-203ENST00000555572 ABCC9O60706 1549 aa30.66■■■□□ 2.5
NME1-NME2-203ENST00000555572 CCDC180Q9P1Z9 1646 aa30.51■■■□□ 2.47
NME1-NME2-203ENST00000555572 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
NME1-NME2-203ENST00000555572 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
NME1-NME2-203ENST00000555572 NACADO15069 1562 aa28.93■■■□□ 2.22
NME1-NME2-203ENST00000555572 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
NME1-NME2-203ENST00000555572 PABPN1Q86U42 306 aaKnown RBP eCLIP28.56■■■□□ 2.16
NME1-NME2-203ENST00000555572 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
NME1-NME2-203ENST00000555572 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
NME1-NME2-203ENST00000555572 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
NME1-NME2-203ENST00000555572 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
NME1-NME2-203ENST00000555572 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
NME1-NME2-203ENST00000555572 SHROOM4Q9ULL8 1493 aa27.94■■■□□ 2.06
NME1-NME2-203ENST00000555572 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
NME1-NME2-203ENST00000555572 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
NME1-NME2-203ENST00000555572 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
NME1-NME2-203ENST00000555572 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
NME1-NME2-203ENST00000555572 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
NME1-NME2-203ENST00000555572 DNAJC5Q9H3Z4 198 aa26.74■■□□□ 1.87
NME1-NME2-203ENST00000555572 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
NME1-NME2-203ENST00000555572 CUX2O14529 1486 aa26.52■■□□□ 1.84
NME1-NME2-203ENST00000555572 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
NME1-NME2-203ENST00000555572 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
NME1-NME2-203ENST00000555572 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
NME1-NME2-203ENST00000555572 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
NME1-NME2-203ENST00000555572 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
NME1-NME2-203ENST00000555572 NESP48681 1621 aa26.32■■□□□ 1.8
NME1-NME2-203ENST00000555572 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
NME1-NME2-203ENST00000555572 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
NME1-NME2-203ENST00000555572 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
NME1-NME2-203ENST00000555572 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
NME1-NME2-203ENST00000555572 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
NME1-NME2-203ENST00000555572 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
NME1-NME2-203ENST00000555572 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
NME1-NME2-203ENST00000555572 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
NME1-NME2-203ENST00000555572 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
NME1-NME2-203ENST00000555572 WIZO95785 1651 aa25.81■■□□□ 1.72
NME1-NME2-203ENST00000555572 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
NME1-NME2-203ENST00000555572 WDR62O43379 1518 aa25.69■■□□□ 1.7
NME1-NME2-203ENST00000555572 CFTRP13569 1480 aa25.6■■□□□ 1.69
NME1-NME2-203ENST00000555572 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
NME1-NME2-203ENST00000555572 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
NME1-NME2-203ENST00000555572 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
NME1-NME2-203ENST00000555572 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
NME1-NME2-203ENST00000555572 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
NME1-NME2-203ENST00000555572 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
NME1-NME2-203ENST00000555572 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
NME1-NME2-203ENST00000555572 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
NME1-NME2-203ENST00000555572 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
NME1-NME2-203ENST00000555572 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
NME1-NME2-203ENST00000555572 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
NME1-NME2-203ENST00000555572 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
NME1-NME2-203ENST00000555572 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
NME1-NME2-203ENST00000555572 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
NME1-NME2-203ENST00000555572 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
NME1-NME2-203ENST00000555572 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
NME1-NME2-203ENST00000555572 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
NME1-NME2-203ENST00000555572 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
NME1-NME2-203ENST00000555572 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
NME1-NME2-203ENST00000555572 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.576e-7■■■□□ 16.8
NME1-NME2-203ENST00000555572 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
NME1-NME2-203ENST00000555572 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
NME1-NME2-203ENST00000555572 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
NME1-NME2-203ENST00000555572 SOGA1O94964 1423 aa24.72■■□□□ 1.55
NME1-NME2-203ENST00000555572 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
NME1-NME2-203ENST00000555572 CHD1O14646 1710 aa24.71■■□□□ 1.55
NME1-NME2-203ENST00000555572 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
NME1-NME2-203ENST00000555572 FBLN2P98095 1184 aa24.67■■□□□ 1.54
NME1-NME2-203ENST00000555572 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
NME1-NME2-203ENST00000555572 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
NME1-NME2-203ENST00000555572 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
NME1-NME2-203ENST00000555572 CUX1P39880 1505 aa24.61■■□□□ 1.53
NME1-NME2-203ENST00000555572 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
NME1-NME2-203ENST00000555572 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
NME1-NME2-203ENST00000555572 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
NME1-NME2-203ENST00000555572 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
NME1-NME2-203ENST00000555572 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
NME1-NME2-203ENST00000555572 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
NME1-NME2-203ENST00000555572 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
NME1-NME2-203ENST00000555572 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
NME1-NME2-203ENST00000555572 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
NME1-NME2-203ENST00000555572 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
NME1-NME2-203ENST00000555572 ABCA10Q8WWZ4 1543 aa24.38■■□□□ 1.49
NME1-NME2-203ENST00000555572 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
NME1-NME2-203ENST00000555572 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
NME1-NME2-203ENST00000555572 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
NME1-NME2-203ENST00000555572 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
NME1-NME2-203ENST00000555572 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
NME1-NME2-203ENST00000555572 NUP160Q12769 1436 aa24.16■■□□□ 1.46
NME1-NME2-203ENST00000555572 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
NME1-NME2-203ENST00000555572 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
NME1-NME2-203ENST00000555572 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
NME1-NME2-203ENST00000555572 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
NME1-NME2-203ENST00000555572 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
NME1-NME2-203ENST00000555572 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
NME1-NME2-203ENST00000555572 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
NME1-NME2-203ENST00000555572 JPH4Q96JJ6 628 aa23.93■■□□□ 1.42
NME1-NME2-203ENST00000555572 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
NME1-NME2-203ENST00000555572 KIF27Q86VH2 1401 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms