Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PIGG-224ENST00000513679 562 ntTSL 413.69□□□□□ -0.223e-9■■□□□ 11.9
PRPF8Q6P2Q9 PVT1-201ENST00000504719 754 ntTSL 221.68■■□□□ 1.063e-11■■□□□ 11.9
PRPF8Q6P2Q9 PVT1-204ENST00000517525 392 ntTSL 320.99■□□□□ 0.953e-11■■□□□ 11.9
PRPF8Q6P2Q9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.95■□□□□ 0.783e-11■■□□□ 11.9
PRPF8Q6P2Q9 PVT1-216ENST00000523068 844 ntTSL 5 BASIC9.34□□□□□ -0.913e-11■■□□□ 11.9
PRPF8Q6P2Q9 DNMT3A-208ENST00000466601 812 ntTSL 211.97□□□□□ -0.496e-7■■□□□ 11.9
PRPF8Q6P2Q9 RPL23A-209ENST00000582736 595 ntTSL 1 (best)13.31□□□□□ -0.284e-12■■□□□ 11.9
PRPF8Q6P2Q9 FADS1-212ENST00000539419 563 ntTSL 410.38□□□□□ -0.755e-11■■□□□ 11.9
PRPF8Q6P2Q9 SFXN4-203ENST00000419372 739 ntTSL 220.5■□□□□ 0.871e-8■■□□□ 11.9
PRPF8Q6P2Q9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.336e-8■■□□□ 11.9
PRPF8Q6P2Q9 SFXN4-205ENST00000462913 278 ntTSL 54.14□□□□□ -1.751e-8■■□□□ 11.9
PRPF8Q6P2Q9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.641e-7■■□□□ 11.9
PRPF8Q6P2Q9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.641e-7■■□□□ 11.9
PRPF8Q6P2Q9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.361e-7■■□□□ 11.9
PRPF8Q6P2Q9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.351e-7■■□□□ 11.9
PRPF8Q6P2Q9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.21e-7■■□□□ 11.9
PRPF8Q6P2Q9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.331e-7■■□□□ 11.9
PRPF8Q6P2Q9 RHEB-205ENST00000478470 1153 ntTSL 521.63■■□□□ 1.052e-9■■□□□ 11.9
PRPF8Q6P2Q9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.72e-9■■□□□ 11.9
PRPF8Q6P2Q9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.49■□□□□ 0.392e-9■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-210ENST00000438091 1208 ntTSL 517.24■□□□□ 0.352e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-213ENST00000451231 2163 ntTSL 216.64■□□□□ 0.252e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-209ENST00000436503 1445 ntTSL 1 (best)16.23■□□□□ 0.192e-7■■□□□ 11.9
PRPF8Q6P2Q9 SLC25A32-205ENST00000523866 1347 ntTSL 216.15■□□□□ 0.182e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.162e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-230ENST00000498214 2346 ntTSL 215.78■□□□□ 0.122e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.112e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-214ENST00000451271 2284 ntTSL 1 (best)15.44■□□□□ 0.062e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.032e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-204ENST00000412901 1354 ntTSL 214.99□□□□□ -0.012e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-217ENST00000464406 807 ntTSL 214.82□□□□□ -0.042e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-225ENST00000483582 2467 ntTSL 1 (best)14.79□□□□□ -0.042e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-227ENST00000494365 2499 ntTSL 214.76□□□□□ -0.052e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.052e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-207ENST00000424206 949 ntTSL 314.71□□□□□ -0.052e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-212ENST00000451165 1053 ntTSL 214.7□□□□□ -0.062e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-222ENST00000476810 1044 ntTSL 514.7□□□□□ -0.062e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-226ENST00000490512 1059 ntTSL 214.7□□□□□ -0.062e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-208ENST00000434756 946 ntTSL 514.66□□□□□ -0.062e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.182e-7■■□□□ 11.9
PRPF8Q6P2Q9 WDR60-204ENST00000454771 812 ntTSL 413.88□□□□□ -0.192e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.212e-7■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-219ENST00000466046 2547 ntTSL 213.58□□□□□ -0.242e-7■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-209ENST00000599704 753 ntTSL 312.32□□□□□ -0.442e-9■■□□□ 11.9
PRPF8Q6P2Q9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.1□□□□□ -0.472e-9■■□□□ 11.9
PRPF8Q6P2Q9 MYO9B-211ENST00000597881 432 ntTSL 511.71□□□□□ -0.532e-9■■□□□ 11.9
PRPF8Q6P2Q9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.562e-7■■□□□ 11.9
PRPF8Q6P2Q9 SLC25A32-202ENST00000521645 2815 ntTSL 511.48□□□□□ -0.572e-7■■□□□ 11.9
PRPF8Q6P2Q9 SLC25A32-203ENST00000523256 2711 ntTSL 511.27□□□□□ -0.612e-7■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-204ENST00000596315 761 ntTSL 2 BASIC11.15□□□□□ -0.622e-9■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-208ENST00000599255 667 ntTSL 311.14□□□□□ -0.632e-9■■□□□ 11.9
PRPF8Q6P2Q9 IL17RC-223ENST00000478206 597 ntTSL 1 (best)11.07□□□□□ -0.642e-7■■□□□ 11.9
PRPF8Q6P2Q9 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.72e-7■■□□□ 11.9
PRPF8Q6P2Q9 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.762e-7■■□□□ 11.9
PRPF8Q6P2Q9 SEMA4B-205ENST00000558848 639 ntTSL 210.21□□□□□ -0.772e-7■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-207ENST00000597529 437 ntTSL 29.34□□□□□ -0.912e-9■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-203ENST00000594198 263 ntTSL 28.93□□□□□ -0.982e-9■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-202ENST00000593437 502 ntTSL 58.88□□□□□ -0.992e-9■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.992e-9■■□□□ 11.9
PRPF8Q6P2Q9 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.062e-9■■□□□ 11.9
PRPF8Q6P2Q9 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.23□□□□□ -1.252e-7■■□□□ 11.9
PRPF8Q6P2Q9 CWC15-206ENST00000621358 1113 ntTSL 56.89□□□□□ -1.313e-6■■□□□ 11.9
PRPF8Q6P2Q9 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.393e-6■■□□□ 11.9
PRPF8Q6P2Q9 SREBF2-204ENST00000462539 796 ntTSL 25.38□□□□□ -1.554e-8■■□□□ 11.9
PRPF8Q6P2Q9 XIST-206ENST00000434839 2865 ntTSL 5 BASIC5.06□□□□□ -1.62e-7■■□□□ 11.9
PRPF8Q6P2Q9 FAM91A1-206ENST00000520246 1262 ntTSL 24.96□□□□□ -1.612e-7■■□□□ 11.9
PRPF8Q6P2Q9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.72e-7■■□□□ 11.9
PRPF8Q6P2Q9 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.25□□□□□ -1.732e-7■■□□□ 11.9
PRPF8Q6P2Q9 FAM91A1-203ENST00000518333 570 ntTSL 23.3□□□□□ -1.882e-7■■□□□ 11.9
PRPF8Q6P2Q9 PCM1-223ENST00000524356 577 ntTSL 23.07□□□□□ -1.922e-7■■□□□ 11.9
PRPF8Q6P2Q9 RHEB-202ENST00000470072 764 ntTSL 42.57□□□□□ -22e-9■■□□□ 11.9
PRPF8Q6P2Q9 SLC25A32-204ENST00000523701 938 ntTSL 31.3□□□□□ -2.22e-7■■□□□ 11.9
PRPF8Q6P2Q9 FAM91A1-204ENST00000518976 626 ntTSL 31.04□□□□□ -2.242e-7■■□□□ 11.9
PRPF8Q6P2Q9 HLTF-204ENST00000467858 1276 ntTSL 51□□□□□ -2.252e-7■■□□□ 11.9
PRPF8Q6P2Q9 HLTF-209ENST00000497427 570 ntTSL 51□□□□□ -2.252e-7■■□□□ 11.9
PRPF8Q6P2Q9 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.76□□□□□ -1.492e-8■■□□□ 11.9
PRPF8Q6P2Q9 MCF2L-211ENST00000413354 952 ntTSL 513.49□□□□□ -0.258e-7■■□□□ 11.9
PRPF8Q6P2Q9 MBD3-208ENST00000590830 1035 ntTSL 1 (best)18.88■□□□□ 0.614e-9■■□□□ 11.9
PRPF8Q6P2Q9 HLA-E-202ENST00000484194 726 nt21.85■■□□□ 1.096e-10■■□□□ 11.9
PRPF8Q6P2Q9 HLA-E-203ENST00000493699 907 nt18.89■□□□□ 0.616e-10■■□□□ 11.9
PRPF8Q6P2Q9 FADS2-204ENST00000517312 588 ntTSL 513.07□□□□□ -0.323e-6■■□□□ 11.9
PRPF8Q6P2Q9 GOT1-202ENST00000471741 716 ntTSL 29.16□□□□□ -0.946e-10■■□□□ 11.9
PRPF8Q6P2Q9 FADS2-206ENST00000518606 510 ntTSL 46.06□□□□□ -1.443e-6■■□□□ 11.9
PRPF8Q6P2Q9 KCTD15-210ENST00000590906 534 ntTSL 410.43□□□□□ -0.742e-7■■□□□ 11.9
PRPF8Q6P2Q9 KCTD15-211ENST00000592210 743 ntTSL 210.35□□□□□ -0.752e-7■■□□□ 11.9
PRPF8Q6P2Q9 WDFY1-205ENST00000491453 308 ntTSL 36.9□□□□□ -1.312e-7■■□□□ 11.9
PRPF8Q6P2Q9 GIGYF2-213ENST00000426102 561 ntTSL 43.92□□□□□ -1.785e-6■■□□□ 11.9
PRPF8Q6P2Q9 MTA1-211ENST00000481206 842 ntTSL 217.61■□□□□ 0.418e-12■■□□□ 11.9
PRPF8Q6P2Q9 MTA1-212ENST00000481635 700 ntTSL 213.96□□□□□ -0.188e-12■■□□□ 11.9
PRPF8Q6P2Q9 MTA1-215ENST00000494981 509 ntTSL 312.42□□□□□ -0.428e-12■■□□□ 11.9
PRPF8Q6P2Q9 NEPRO-210ENST00000472166 459 ntTSL 44.9□□□□□ -1.624e-7■■□□□ 11.9
PRPF8Q6P2Q9 RNF213-215ENST00000573038 699 ntTSL 311.48□□□□□ -0.571e-8■■□□□ 11.9
PRPF8Q6P2Q9 GGA2-206ENST00000566547 603 ntTSL 219.34■□□□□ 0.695e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-213ENST00000566292 575 ntTSL 215.87■□□□□ 0.135e-11■■□□□ 11.9
PRPF8Q6P2Q9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.35■□□□□ 0.055e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-209ENST00000564387 558 ntTSL 414.58□□□□□ -0.085e-11■■□□□ 11.9
PRPF8Q6P2Q9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.06□□□□□ -0.166e-21■■□□□ 11.9
PRPF8Q6P2Q9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.26e-21■■□□□ 11.9
PRPF8Q6P2Q9 USB1-204ENST00000561568 671 ntTSL 413.52□□□□□ -0.255e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-206ENST00000562534 562 ntTSL 413.52□□□□□ -0.255e-11■■□□□ 11.9
Retrieved 100 of 73,762 protein–RNA pairs in 1013.3 ms