RNA–Protein interactions for RNA: ENST00000596315.5

EMP3-204, Transcript of epithelial membrane protein 3, humanhuman

TSL 2 BASIC

Gene EMP3, Length 761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-204ENST00000596315 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
EMP3-204ENST00000596315 ABCC9O60706 1549 aa28.58■■■□□ 2.17
EMP3-204ENST00000596315 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
EMP3-204ENST00000596315 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
EMP3-204ENST00000596315 NACADO15069 1562 aa26.9■■□□□ 1.9
EMP3-204ENST00000596315 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
EMP3-204ENST00000596315 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
EMP3-204ENST00000596315 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
EMP3-204ENST00000596315 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
EMP3-204ENST00000596315 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
EMP3-204ENST00000596315 BICRAQ9NZM4 1560 aa26.44■■□□□ 1.82
EMP3-204ENST00000596315 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
EMP3-204ENST00000596315 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.77
EMP3-204ENST00000596315 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
EMP3-204ENST00000596315 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
EMP3-204ENST00000596315 CC2D2AQ9P2K1 1620 aa25.84■■□□□ 1.73
EMP3-204ENST00000596315 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
EMP3-204ENST00000596315 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
EMP3-204ENST00000596315 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
EMP3-204ENST00000596315 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
EMP3-204ENST00000596315 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
EMP3-204ENST00000596315 SMARCA2P51531 1590 aa24.7■■□□□ 1.54
EMP3-204ENST00000596315 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
EMP3-204ENST00000596315 ERCC6Q03468 1493 aa24.63■■□□□ 1.53
EMP3-204ENST00000596315 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
EMP3-204ENST00000596315 NESP48681 1621 aa24.58■■□□□ 1.53
EMP3-204ENST00000596315 CUX2O14529 1486 aa24.56■■□□□ 1.52
EMP3-204ENST00000596315 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
EMP3-204ENST00000596315 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
EMP3-204ENST00000596315 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
EMP3-204ENST00000596315 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
EMP3-204ENST00000596315 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
EMP3-204ENST00000596315 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
EMP3-204ENST00000596315 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
EMP3-204ENST00000596315 WIZO95785 1651 aa24.27■■□□□ 1.48
EMP3-204ENST00000596315 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
EMP3-204ENST00000596315 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
EMP3-204ENST00000596315 MRC2Q9UBG0 1479 aa23.98■■□□□ 1.43
EMP3-204ENST00000596315 WDR62O43379 1518 aa23.95■■□□□ 1.43
EMP3-204ENST00000596315 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
EMP3-204ENST00000596315 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
EMP3-204ENST00000596315 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
EMP3-204ENST00000596315 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
EMP3-204ENST00000596315 CFTRP13569 1480 aa23.79■■□□□ 1.4
EMP3-204ENST00000596315 PRDM2Q13029 1718 aa23.77■■□□□ 1.4
EMP3-204ENST00000596315 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
EMP3-204ENST00000596315 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
EMP3-204ENST00000596315 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
EMP3-204ENST00000596315 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
EMP3-204ENST00000596315 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
EMP3-204ENST00000596315 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
EMP3-204ENST00000596315 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
EMP3-204ENST00000596315 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
EMP3-204ENST00000596315 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
EMP3-204ENST00000596315 RIMBP3CA6NJZ7 1639 aa23.27■■□□□ 1.32
EMP3-204ENST00000596315 RIMBP3BA6NNM3 1639 aa23.27■■□□□ 1.32
EMP3-204ENST00000596315 RIMBP3Q9UFD9 1639 aa23.27■■□□□ 1.32
EMP3-204ENST00000596315 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
EMP3-204ENST00000596315 CHD1O14646 1710 aa23.25■■□□□ 1.31
EMP3-204ENST00000596315 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
EMP3-204ENST00000596315 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
EMP3-204ENST00000596315 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.32e-7■■■■□ 23.4
EMP3-204ENST00000596315 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
EMP3-204ENST00000596315 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
EMP3-204ENST00000596315 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
EMP3-204ENST00000596315 CUX1P39880 1505 aa23.03■■□□□ 1.28
EMP3-204ENST00000596315 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
EMP3-204ENST00000596315 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
EMP3-204ENST00000596315 SOGA1O94964 1423 aa22.97■■□□□ 1.27
EMP3-204ENST00000596315 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
EMP3-204ENST00000596315 FBLN2P98095 1184 aa22.93■■□□□ 1.26
EMP3-204ENST00000596315 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
EMP3-204ENST00000596315 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
EMP3-204ENST00000596315 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
EMP3-204ENST00000596315 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.25
EMP3-204ENST00000596315 MAGI1Q96QZ7 1491 aaPredicted RBP22.82■■□□□ 1.24
EMP3-204ENST00000596315 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
EMP3-204ENST00000596315 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
EMP3-204ENST00000596315 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
EMP3-204ENST00000596315 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
EMP3-204ENST00000596315 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
EMP3-204ENST00000596315 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
EMP3-204ENST00000596315 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
EMP3-204ENST00000596315 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
EMP3-204ENST00000596315 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
EMP3-204ENST00000596315 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
EMP3-204ENST00000596315 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
EMP3-204ENST00000596315 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
EMP3-204ENST00000596315 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
EMP3-204ENST00000596315 CEP170Q5SW79 1584 aa22.56■■□□□ 1.2
EMP3-204ENST00000596315 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
EMP3-204ENST00000596315 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
EMP3-204ENST00000596315 NUP160Q12769 1436 aa22.47■■□□□ 1.19
EMP3-204ENST00000596315 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
EMP3-204ENST00000596315 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
EMP3-204ENST00000596315 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
EMP3-204ENST00000596315 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
EMP3-204ENST00000596315 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
EMP3-204ENST00000596315 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
EMP3-204ENST00000596315 CUL7Q14999 1698 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms