RNA–Protein interactions for RNA: ENST00000597279.5

EMP3-206, Transcript of epithelial membrane protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene EMP3, Length 683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-206ENST00000597279 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
EMP3-206ENST00000597279 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
EMP3-206ENST00000597279 ABCC9O60706 1549 aa22.77■■□□□ 1.24
EMP3-206ENST00000597279 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
EMP3-206ENST00000597279 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
EMP3-206ENST00000597279 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
EMP3-206ENST00000597279 NACADO15069 1562 aa21.48■■□□□ 1.03
EMP3-206ENST00000597279 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
EMP3-206ENST00000597279 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
EMP3-206ENST00000597279 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
EMP3-206ENST00000597279 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
EMP3-206ENST00000597279 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
EMP3-206ENST00000597279 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
EMP3-206ENST00000597279 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
EMP3-206ENST00000597279 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
EMP3-206ENST00000597279 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
EMP3-206ENST00000597279 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
EMP3-206ENST00000597279 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
EMP3-206ENST00000597279 CECR2Q9BXF3 1484 aa20.46■□□□□ 0.87
EMP3-206ENST00000597279 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
EMP3-206ENST00000597279 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
EMP3-206ENST00000597279 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
EMP3-206ENST00000597279 SMARCA2P51531 1590 aa19.75■□□□□ 0.75
EMP3-206ENST00000597279 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
EMP3-206ENST00000597279 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
EMP3-206ENST00000597279 CUX2O14529 1486 aa19.71■□□□□ 0.75
EMP3-206ENST00000597279 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
EMP3-206ENST00000597279 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
EMP3-206ENST00000597279 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
EMP3-206ENST00000597279 NESP48681 1621 aa19.62■□□□□ 0.73
EMP3-206ENST00000597279 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
EMP3-206ENST00000597279 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
EMP3-206ENST00000597279 WIZO95785 1651 aa19.46■□□□□ 0.71
EMP3-206ENST00000597279 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
EMP3-206ENST00000597279 LAMC3Q9Y6N6 1575 aa19.37■□□□□ 0.69
EMP3-206ENST00000597279 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
EMP3-206ENST00000597279 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
EMP3-206ENST00000597279 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
EMP3-206ENST00000597279 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
EMP3-206ENST00000597279 TOP2AP11388 1531 aaKnown RBP19.17■□□□□ 0.66
EMP3-206ENST00000597279 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
EMP3-206ENST00000597279 WDR62O43379 1518 aa19.08■□□□□ 0.64
EMP3-206ENST00000597279 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
EMP3-206ENST00000597279 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
EMP3-206ENST00000597279 CFTRP13569 1480 aa19.05■□□□□ 0.64
EMP3-206ENST00000597279 CCDC88BA6NC98 1476 aa18.95■□□□□ 0.62
EMP3-206ENST00000597279 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
EMP3-206ENST00000597279 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
EMP3-206ENST00000597279 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
EMP3-206ENST00000597279 ZNF608Q9ULD9 1512 aaPredicted RBP18.7■□□□□ 0.58
EMP3-206ENST00000597279 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
EMP3-206ENST00000597279 IFT140Q96RY7 1462 aa18.66■□□□□ 0.58
EMP3-206ENST00000597279 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
EMP3-206ENST00000597279 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
EMP3-206ENST00000597279 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
EMP3-206ENST00000597279 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
EMP3-206ENST00000597279 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
EMP3-206ENST00000597279 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
EMP3-206ENST00000597279 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
EMP3-206ENST00000597279 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.562e-7■■■■□ 23.4
EMP3-206ENST00000597279 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
EMP3-206ENST00000597279 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
EMP3-206ENST00000597279 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
EMP3-206ENST00000597279 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
EMP3-206ENST00000597279 CUX1P39880 1505 aa18.48■□□□□ 0.55
EMP3-206ENST00000597279 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
EMP3-206ENST00000597279 CHD1O14646 1710 aa18.46■□□□□ 0.55
EMP3-206ENST00000597279 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
EMP3-206ENST00000597279 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
EMP3-206ENST00000597279 SOGA1O94964 1423 aa18.42■□□□□ 0.54
EMP3-206ENST00000597279 FBLN2P98095 1184 aa18.38■□□□□ 0.53
EMP3-206ENST00000597279 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
EMP3-206ENST00000597279 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
EMP3-206ENST00000597279 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
EMP3-206ENST00000597279 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
EMP3-206ENST00000597279 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
EMP3-206ENST00000597279 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
EMP3-206ENST00000597279 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
EMP3-206ENST00000597279 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
EMP3-206ENST00000597279 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
EMP3-206ENST00000597279 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
EMP3-206ENST00000597279 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
EMP3-206ENST00000597279 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
EMP3-206ENST00000597279 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
EMP3-206ENST00000597279 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
EMP3-206ENST00000597279 SYNJ2O15056 1496 aa18.19■□□□□ 0.5
EMP3-206ENST00000597279 BIVM-ERCC5R4GMW8 1640 aa18.18■□□□□ 0.5
EMP3-206ENST00000597279 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
EMP3-206ENST00000597279 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
EMP3-206ENST00000597279 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
EMP3-206ENST00000597279 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
EMP3-206ENST00000597279 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
EMP3-206ENST00000597279 ERCC6L2Q5T890 1561 aa18■□□□□ 0.47
EMP3-206ENST00000597279 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
EMP3-206ENST00000597279 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
EMP3-206ENST00000597279 NUP160Q12769 1436 aa17.96■□□□□ 0.47
EMP3-206ENST00000597279 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
EMP3-206ENST00000597279 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
EMP3-206ENST00000597279 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
EMP3-206ENST00000597279 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms