RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.5
CCDC107-204ENST00000378409 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
CCDC107-204ENST00000378409 ABCC9O60706 1549 aa31.18■■■□□ 2.58
CCDC107-204ENST00000378409 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
CCDC107-204ENST00000378409 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
CCDC107-204ENST00000378409 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
CCDC107-204ENST00000378409 NACADO15069 1562 aa30.41■■■□□ 2.46
CCDC107-204ENST00000378409 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
CCDC107-204ENST00000378409 RB1CC1Q8TDY2 1594 aa30.29■■■□□ 2.44
CCDC107-204ENST00000378409 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
CCDC107-204ENST00000378409 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
CCDC107-204ENST00000378409 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
CCDC107-204ENST00000378409 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
CCDC107-204ENST00000378409 PABPN1Q86U42 306 aaKnown RBP eCLIP29.23■■■□□ 2.27
CCDC107-204ENST00000378409 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
CCDC107-204ENST00000378409 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
CCDC107-204ENST00000378409 BAZ1AQ9NRL2 1556 aaPredicted RBP28.6■■■□□ 2.17
CCDC107-204ENST00000378409 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
CCDC107-204ENST00000378409 EIF4G1Q04637 1599 aaKnown RBP28.52■■■□□ 2.16
CCDC107-204ENST00000378409 MROH2BQ7Z745 1585 aa28.51■■■□□ 2.15
CCDC107-204ENST00000378409 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
CCDC107-204ENST00000378409 WIZO95785 1651 aa28.31■■■□□ 2.12
CCDC107-204ENST00000378409 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
CCDC107-204ENST00000378409 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
CCDC107-204ENST00000378409 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
CCDC107-204ENST00000378409 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
CCDC107-204ENST00000378409 ATAD2BQ9ULI0 1458 aa28.16■■■□□ 2.1
CCDC107-204ENST00000378409 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
CCDC107-204ENST00000378409 BAZ1BQ9UIG0 1483 aaKnown RBP28.01■■■□□ 2.07
CCDC107-204ENST00000378409 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
CCDC107-204ENST00000378409 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
CCDC107-204ENST00000378409 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
CCDC107-204ENST00000378409 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
CCDC107-204ENST00000378409 CFTRP13569 1480 aa27.24■■□□□ 1.95
CCDC107-204ENST00000378409 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
CCDC107-204ENST00000378409 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
CCDC107-204ENST00000378409 NESP48681 1621 aa27.19■■□□□ 1.94
CCDC107-204ENST00000378409 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
CCDC107-204ENST00000378409 FANCD2Q9BXW9 1451 aa26.97■■□□□ 1.91
CCDC107-204ENST00000378409 PDS5BQ9NTI5 1447 aa26.96■■□□□ 1.91
CCDC107-204ENST00000378409 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
CCDC107-204ENST00000378409 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
CCDC107-204ENST00000378409 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
CCDC107-204ENST00000378409 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
CCDC107-204ENST00000378409 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
CCDC107-204ENST00000378409 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
CCDC107-204ENST00000378409 DNAJC5Q9H3Z4 198 aa26.74■■□□□ 1.87
CCDC107-204ENST00000378409 CUX1P39880 1505 aa26.71■■□□□ 1.87
CCDC107-204ENST00000378409 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
CCDC107-204ENST00000378409 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
CCDC107-204ENST00000378409 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
CCDC107-204ENST00000378409 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
CCDC107-204ENST00000378409 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
CCDC107-204ENST00000378409 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
CCDC107-204ENST00000378409 THOC2Q8NI27 1593 aaKnown RBP26.64■■□□□ 1.86
CCDC107-204ENST00000378409 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
CCDC107-204ENST00000378409 WDR62O43379 1518 aa26.57■■□□□ 1.84
CCDC107-204ENST00000378409 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
CCDC107-204ENST00000378409 POLA1P09884 1462 aaPredicted RBP26.44■■□□□ 1.82
CCDC107-204ENST00000378409 CUX2O14529 1486 aa26.38■■□□□ 1.81
CCDC107-204ENST00000378409 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
CCDC107-204ENST00000378409 SOGA1O94964 1423 aa26.33■■□□□ 1.81
CCDC107-204ENST00000378409 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
CCDC107-204ENST00000378409 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
CCDC107-204ENST00000378409 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
CCDC107-204ENST00000378409 IFT140Q96RY7 1462 aa26.24■■□□□ 1.79
CCDC107-204ENST00000378409 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
CCDC107-204ENST00000378409 KIF27Q86VH2 1401 aa26.16■■□□□ 1.78
CCDC107-204ENST00000378409 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
CCDC107-204ENST00000378409 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.77
CCDC107-204ENST00000378409 EEA1Q15075 1411 aa26.13■■□□□ 1.77
CCDC107-204ENST00000378409 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
CCDC107-204ENST00000378409 ZNF608Q9ULD9 1512 aaPredicted RBP26.1■■□□□ 1.77
CCDC107-204ENST00000378409 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
CCDC107-204ENST00000378409 PBRM1Q86U86 1689 aa26.08■■□□□ 1.77
CCDC107-204ENST00000378409 GAPVD1Q14C86 1478 aa26.06■■□□□ 1.76
CCDC107-204ENST00000378409 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.762e-8■■■■□ 19.7
CCDC107-204ENST00000378409 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
CCDC107-204ENST00000378409 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
CCDC107-204ENST00000378409 GRIN2BQ13224 1484 aa25.94■■□□□ 1.74
CCDC107-204ENST00000378409 IGF1RP08069 1367 aa25.94■■□□□ 1.74
CCDC107-204ENST00000378409 CUL7Q14999 1698 aa25.93■■□□□ 1.74
CCDC107-204ENST00000378409 KIF21BO75037 1637 aa25.88■■□□□ 1.73
CCDC107-204ENST00000378409 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
CCDC107-204ENST00000378409 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
CCDC107-204ENST00000378409 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
CCDC107-204ENST00000378409 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
CCDC107-204ENST00000378409 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
CCDC107-204ENST00000378409 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
CCDC107-204ENST00000378409 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
CCDC107-204ENST00000378409 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
CCDC107-204ENST00000378409 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
CCDC107-204ENST00000378409 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
CCDC107-204ENST00000378409 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
CCDC107-204ENST00000378409 CHD1O14646 1710 aa25.68■■□□□ 1.7
CCDC107-204ENST00000378409 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
CCDC107-204ENST00000378409 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
CCDC107-204ENST00000378409 CTTNBP2Q8WZ74 1663 aa25.61■■□□□ 1.69
CCDC107-204ENST00000378409 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
CCDC107-204ENST00000378409 FBLN2P98095 1184 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 1109.7 ms