RNA–Protein interactions for RNA: ENST00000497427.1

HLTF-209, Transcript of helicase like transcription factor, humanhuman

TSL 5

Gene HLTF, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLTF-209ENST00000497427 AEBP2Q6ZN18 517 aaPredicted RBP26.79■■□□□ 1.88
HLTF-209ENST00000497427 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
HLTF-209ENST00000497427 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
HLTF-209ENST00000497427 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
HLTF-209ENST00000497427 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
HLTF-209ENST00000497427 FOXD1Q16676 465 aa21.12■□□□□ 0.97
HLTF-209ENST00000497427 POTEDQ86YR6 584 aa20.82■□□□□ 0.92
HLTF-209ENST00000497427 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
HLTF-209ENST00000497427 ADRA2BP18089 450 aa20.31■□□□□ 0.84
HLTF-209ENST00000497427 PIAS4Q8N2W9 510 aaPredicted RBP19.95■□□□□ 0.78
HLTF-209ENST00000497427 MSH5O43196 834 aa19.58■□□□□ 0.72
HLTF-209ENST00000497427 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
HLTF-209ENST00000497427 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
HLTF-209ENST00000497427 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
HLTF-209ENST00000497427 KCNA4P22459 653 aa18.42■□□□□ 0.54
HLTF-209ENST00000497427 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
HLTF-209ENST00000497427 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
HLTF-209ENST00000497427 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
HLTF-209ENST00000497427 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
HLTF-209ENST00000497427 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
HLTF-209ENST00000497427 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
HLTF-209ENST00000497427 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
HLTF-209ENST00000497427 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
HLTF-209ENST00000497427 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
HLTF-209ENST00000497427 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
HLTF-209ENST00000497427 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
HLTF-209ENST00000497427 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
HLTF-209ENST00000497427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■□□□ 13.6
HLTF-209ENST00000497427 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
HLTF-209ENST00000497427 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
HLTF-209ENST00000497427 ZBTB22O15209 634 aa16.91■□□□□ 0.3
HLTF-209ENST00000497427 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
HLTF-209ENST00000497427 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
HLTF-209ENST00000497427 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
HLTF-209ENST00000497427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
HLTF-209ENST00000497427 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
HLTF-209ENST00000497427 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
HLTF-209ENST00000497427 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
HLTF-209ENST00000497427 APLP2Q06481 763 aa16.54■□□□□ 0.24
HLTF-209ENST00000497427 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
HLTF-209ENST00000497427 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
HLTF-209ENST00000497427 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
HLTF-209ENST00000497427 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
HLTF-209ENST00000497427 CAPN15O75808 1086 aa16.18■□□□□ 0.18
HLTF-209ENST00000497427 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
HLTF-209ENST00000497427 POTEHQ6S545 545 aa16.06■□□□□ 0.16
HLTF-209ENST00000497427 DSG3P32926 999 aa15.91■□□□□ 0.14
HLTF-209ENST00000497427 POLA2Q14181 598 aa15.89■□□□□ 0.13
HLTF-209ENST00000497427 ABCB7O75027 752 aa15.82■□□□□ 0.12
HLTF-209ENST00000497427 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
HLTF-209ENST00000497427 FBLN2P98095 1184 aa15.67■□□□□ 0.1
HLTF-209ENST00000497427 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
HLTF-209ENST00000497427 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
HLTF-209ENST00000497427 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
HLTF-209ENST00000497427 FKBP8Q14318 412 aa15.29■□□□□ 0.04
HLTF-209ENST00000497427 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
HLTF-209ENST00000497427 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
HLTF-209ENST00000497427 SPDYE4A6NLX3 237 aa15.27■□□□□ 0.04
HLTF-209ENST00000497427 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
HLTF-209ENST00000497427 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
HLTF-209ENST00000497427 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
HLTF-209ENST00000497427 AKT1S1Q96B36 256 aa15.06■□□□□ 0
HLTF-209ENST00000497427 PROM2Q8N271 834 aa15.05■□□□□ -0
HLTF-209ENST00000497427 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
HLTF-209ENST00000497427 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
HLTF-209ENST00000497427 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
HLTF-209ENST00000497427 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
HLTF-209ENST00000497427 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
HLTF-209ENST00000497427 CLEC11AQ9Y240 323 aa14.67□□□□□ -0.06
HLTF-209ENST00000497427 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
HLTF-209ENST00000497427 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
HLTF-209ENST00000497427 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
HLTF-209ENST00000497427 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
HLTF-209ENST00000497427 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
HLTF-209ENST00000497427 MIER1Q8N108 512 aa14.49□□□□□ -0.09
HLTF-209ENST00000497427 SP7Q8TDD2 431 aaPredicted RBP14.48□□□□□ -0.09
HLTF-209ENST00000497427 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
HLTF-209ENST00000497427 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
HLTF-209ENST00000497427 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
HLTF-209ENST00000497427 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
HLTF-209ENST00000497427 IFNLR1Q8IU57 520 aaPredicted RBP14.35□□□□□ -0.11
HLTF-209ENST00000497427 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
HLTF-209ENST00000497427 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
HLTF-209ENST00000497427 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
HLTF-209ENST00000497427 NPM1P06748 294 aaKnown RBP eCLIP14.25□□□□□ -0.13
HLTF-209ENST00000497427 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
HLTF-209ENST00000497427 SPOCK2Q92563 424 aa14.24□□□□□ -0.13
HLTF-209ENST00000497427 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
HLTF-209ENST00000497427 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
HLTF-209ENST00000497427 AMER1Q5JTC6 1135 aaPredicted RBP14.14□□□□□ -0.15
HLTF-209ENST00000497427 NUBP1P53384 320 aa14.09□□□□□ -0.15
HLTF-209ENST00000497427 GSE1Q14687 1217 aa14.04□□□□□ -0.16
HLTF-209ENST00000497427 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
HLTF-209ENST00000497427 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
HLTF-209ENST00000497427 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
HLTF-209ENST00000497427 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
HLTF-209ENST00000497427 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
HLTF-209ENST00000497427 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
HLTF-209ENST00000497427 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
HLTF-209ENST00000497427 C19orf67A6NJJ6 358 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms