RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 NISCHQ9Y2I1 1504 aa39.91■■■■□ 3.98
CCDC107-201ENST00000327351 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
CCDC107-201ENST00000327351 ABCC9O60706 1549 aa34.72■■■■□ 3.15
CCDC107-201ENST00000327351 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
CCDC107-201ENST00000327351 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
CCDC107-201ENST00000327351 NACADO15069 1562 aa33.38■■■□□ 2.93
CCDC107-201ENST00000327351 ZCCHC6Q5VYS8 1495 aaKnown RBP33.23■■■□□ 2.91
CCDC107-201ENST00000327351 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
CCDC107-201ENST00000327351 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
CCDC107-201ENST00000327351 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
CCDC107-201ENST00000327351 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
CCDC107-201ENST00000327351 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
CCDC107-201ENST00000327351 BICRAQ9NZM4 1560 aa32.33■■■□□ 2.77
CCDC107-201ENST00000327351 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
CCDC107-201ENST00000327351 DNAJC5BQ9UF47 199 aa31.81■■■□□ 2.68
CCDC107-201ENST00000327351 EIF4G1Q04637 1599 aaKnown RBP31.52■■■□□ 2.64
CCDC107-201ENST00000327351 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
CCDC107-201ENST00000327351 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
CCDC107-201ENST00000327351 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
CCDC107-201ENST00000327351 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
CCDC107-201ENST00000327351 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
CCDC107-201ENST00000327351 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
CCDC107-201ENST00000327351 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
CCDC107-201ENST00000327351 MROH2BQ7Z745 1585 aa30.74■■■□□ 2.51
CCDC107-201ENST00000327351 PEG3Q9GZU2 1588 aa30.64■■■□□ 2.5
CCDC107-201ENST00000327351 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
CCDC107-201ENST00000327351 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
CCDC107-201ENST00000327351 SUPT5HO00267 1087 aaKnown RBP30.49■■■□□ 2.47
CCDC107-201ENST00000327351 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
CCDC107-201ENST00000327351 WIZO95785 1651 aa30.4■■■□□ 2.46
CCDC107-201ENST00000327351 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
CCDC107-201ENST00000327351 NESP48681 1621 aa30.01■■■□□ 2.39
CCDC107-201ENST00000327351 LAMC3Q9Y6N6 1575 aa29.99■■■□□ 2.39
CCDC107-201ENST00000327351 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
CCDC107-201ENST00000327351 CADPSQ9ULU8 1353 aa29.91■■■□□ 2.38
CCDC107-201ENST00000327351 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
CCDC107-201ENST00000327351 CCDC88BA6NC98 1476 aa29.75■■■□□ 2.35
CCDC107-201ENST00000327351 CFTRP13569 1480 aa29.71■■■□□ 2.35
CCDC107-201ENST00000327351 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
CCDC107-201ENST00000327351 CUX2O14529 1486 aa29.63■■■□□ 2.33
CCDC107-201ENST00000327351 FANCD2Q9BXW9 1451 aa29.56■■■□□ 2.32
CCDC107-201ENST00000327351 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
CCDC107-201ENST00000327351 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
CCDC107-201ENST00000327351 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
CCDC107-201ENST00000327351 PRDM2Q13029 1718 aa29.47■■■□□ 2.31
CCDC107-201ENST00000327351 WDR62O43379 1518 aa29.35■■■□□ 2.29
CCDC107-201ENST00000327351 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
CCDC107-201ENST00000327351 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
CCDC107-201ENST00000327351 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
CCDC107-201ENST00000327351 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
CCDC107-201ENST00000327351 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
CCDC107-201ENST00000327351 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
CCDC107-201ENST00000327351 CUX1P39880 1505 aa28.84■■■□□ 2.21
CCDC107-201ENST00000327351 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
CCDC107-201ENST00000327351 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
CCDC107-201ENST00000327351 SOGA1O94964 1423 aa28.75■■■□□ 2.19
CCDC107-201ENST00000327351 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
CCDC107-201ENST00000327351 TARBP1Q13395 1621 aaKnown RBP28.73■■■□□ 2.19
CCDC107-201ENST00000327351 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
CCDC107-201ENST00000327351 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
CCDC107-201ENST00000327351 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
CCDC107-201ENST00000327351 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.18
CCDC107-201ENST00000327351 EIF4G3O43432 1585 aaKnown RBP28.64■■■□□ 2.18
CCDC107-201ENST00000327351 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
CCDC107-201ENST00000327351 AQRO60306 1485 aaKnown RBP eCLIP28.6■■■□□ 2.172e-8■■■■□ 19.7
CCDC107-201ENST00000327351 BIVM-ERCC5R4GMW8 1640 aa28.6■■■□□ 2.17
CCDC107-201ENST00000327351 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
CCDC107-201ENST00000327351 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
CCDC107-201ENST00000327351 WDR97A6NE52 1622 aa28.56■■■□□ 2.16
CCDC107-201ENST00000327351 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
CCDC107-201ENST00000327351 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
CCDC107-201ENST00000327351 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
CCDC107-201ENST00000327351 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
CCDC107-201ENST00000327351 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
CCDC107-201ENST00000327351 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
CCDC107-201ENST00000327351 FBLN2P98095 1184 aa28.34■■■□□ 2.13
CCDC107-201ENST00000327351 MAGI1Q96QZ7 1491 aaPredicted RBP28.33■■■□□ 2.13
CCDC107-201ENST00000327351 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
CCDC107-201ENST00000327351 CHD1O14646 1710 aa28.26■■■□□ 2.12
CCDC107-201ENST00000327351 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
CCDC107-201ENST00000327351 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
CCDC107-201ENST00000327351 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
CCDC107-201ENST00000327351 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
CCDC107-201ENST00000327351 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
CCDC107-201ENST00000327351 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
CCDC107-201ENST00000327351 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
CCDC107-201ENST00000327351 EEA1Q15075 1411 aa28.08■■■□□ 2.09
CCDC107-201ENST00000327351 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.08
CCDC107-201ENST00000327351 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
CCDC107-201ENST00000327351 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
CCDC107-201ENST00000327351 IGF1RP08069 1367 aa27.97■■■□□ 2.07
CCDC107-201ENST00000327351 CLASP1Q7Z460 1538 aa27.96■■■□□ 2.07
CCDC107-201ENST00000327351 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
CCDC107-201ENST00000327351 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
CCDC107-201ENST00000327351 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
CCDC107-201ENST00000327351 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
CCDC107-201ENST00000327351 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
CCDC107-201ENST00000327351 CUL7Q14999 1698 aa27.91■■■□□ 2.06
CCDC107-201ENST00000327351 NUP160Q12769 1436 aa27.88■■■□□ 2.05
CCDC107-201ENST00000327351 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms