RNA–Protein interactions for RNA: ENST00000434839.2

XIST-206, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 2,865 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-206ENST00000434839 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
XIST-206ENST00000434839 MYT1Q01538 1121 aa14.44□□□□□ -0.1
XIST-206ENST00000434839 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
XIST-206ENST00000434839 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
XIST-206ENST00000434839 HRCP23327 699 aa13.81□□□□□ -0.2
XIST-206ENST00000434839 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
XIST-206ENST00000434839 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
XIST-206ENST00000434839 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
XIST-206ENST00000434839 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
XIST-206ENST00000434839 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
XIST-206ENST00000434839 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
XIST-206ENST00000434839 APLP2Q06481 763 aa13.01□□□□□ -0.33
XIST-206ENST00000434839 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
XIST-206ENST00000434839 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.34
XIST-206ENST00000434839 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.34
XIST-206ENST00000434839 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
XIST-206ENST00000434839 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
XIST-206ENST00000434839 CHIC1Q5VXU3 224 aa12.89□□□□□ -0.35
XIST-206ENST00000434839 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
XIST-206ENST00000434839 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
XIST-206ENST00000434839 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
XIST-206ENST00000434839 NEUROD1Q13562 356 aa12.75□□□□□ -0.37
XIST-206ENST00000434839 MYO15BQ96JP2 1530 aa12.69□□□□□ -0.38
XIST-206ENST00000434839 ANP32EQ9BTT0 268 aa12.66□□□□□ -0.38
XIST-206ENST00000434839 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
XIST-206ENST00000434839 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
XIST-206ENST00000434839 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
XIST-206ENST00000434839 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
XIST-206ENST00000434839 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
XIST-206ENST00000434839 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
XIST-206ENST00000434839 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
XIST-206ENST00000434839 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
XIST-206ENST00000434839 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
XIST-206ENST00000434839 ABCC9O60706 1549 aa12.22□□□□□ -0.45
XIST-206ENST00000434839 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
XIST-206ENST00000434839 CLSPNQ9HAW4 1339 aa12.21□□□□□ -0.45
XIST-206ENST00000434839 UBE2Q2Q8WVN8 375 aa12.21□□□□□ -0.45
XIST-206ENST00000434839 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
XIST-206ENST00000434839 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
XIST-206ENST00000434839 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
XIST-206ENST00000434839 NACADO15069 1562 aa12.08□□□□□ -0.48
XIST-206ENST00000434839 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
XIST-206ENST00000434839 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
XIST-206ENST00000434839 AEBP2Q6ZN18 517 aaPredicted RBP12.04□□□□□ -0.48
XIST-206ENST00000434839 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
XIST-206ENST00000434839 KCNA4P22459 653 aa12.03□□□□□ -0.48
XIST-206ENST00000434839 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
XIST-206ENST00000434839 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
XIST-206ENST00000434839 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
XIST-206ENST00000434839 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
XIST-206ENST00000434839 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
XIST-206ENST00000434839 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
XIST-206ENST00000434839 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
XIST-206ENST00000434839 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
XIST-206ENST00000434839 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
XIST-206ENST00000434839 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
XIST-206ENST00000434839 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
XIST-206ENST00000434839 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
XIST-206ENST00000434839 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
XIST-206ENST00000434839 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
XIST-206ENST00000434839 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
XIST-206ENST00000434839 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
XIST-206ENST00000434839 ARXQ96QS3 562 aa11.79□□□□□ -0.52
XIST-206ENST00000434839 MIER1Q8N108 512 aa11.78□□□□□ -0.52
XIST-206ENST00000434839 MSH5O43196 834 aa11.75□□□□□ -0.53
XIST-206ENST00000434839 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
XIST-206ENST00000434839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
XIST-206ENST00000434839 FANCIQ9NVI1 1328 aa11.72□□□□□ -0.53
XIST-206ENST00000434839 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
XIST-206ENST00000434839 DNAJC5BQ9UF47 199 aa11.69□□□□□ -0.54
XIST-206ENST00000434839 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
XIST-206ENST00000434839 TULP1O00294 542 aaPredicted RBP11.64□□□□□ -0.55
XIST-206ENST00000434839 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
XIST-206ENST00000434839 NEFLP07196 543 aa11.57□□□□□ -0.56
XIST-206ENST00000434839 GLIPR1L2Q4G1C9 344 aa11.54□□□□□ -0.56
XIST-206ENST00000434839 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
XIST-206ENST00000434839 BCANQ96GW7 911 aa11.52□□□□□ -0.57
XIST-206ENST00000434839 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
XIST-206ENST00000434839 FKBP8Q14318 412 aa11.48□□□□□ -0.57
XIST-206ENST00000434839 CUX2O14529 1486 aa11.47□□□□□ -0.57
XIST-206ENST00000434839 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
XIST-206ENST00000434839 KLHL34Q8N239 644 aa11.46□□□□□ -0.58
XIST-206ENST00000434839 HOMEZQ8IX15 550 aa11.44□□□□□ -0.58
XIST-206ENST00000434839 ZMYND15Q9H091 742 aa11.43□□□□□ -0.58
XIST-206ENST00000434839 CC2D2AQ9P2K1 1620 aa11.43□□□□□ -0.58
XIST-206ENST00000434839 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
XIST-206ENST00000434839 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
XIST-206ENST00000434839 C11orf95C9JLR9 678 aaPredicted RBP11.4□□□□□ -0.58
XIST-206ENST00000434839 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
XIST-206ENST00000434839 CDK11AQ9UQ88 783 aaPredicted RBP11.38□□□□□ -0.59
XIST-206ENST00000434839 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
XIST-206ENST00000434839 EIF4G1Q04637 1599 aaKnown RBP11.38□□□□□ -0.59
XIST-206ENST00000434839 NBR1Q14596 966 aa11.38□□□□□ -0.59
XIST-206ENST00000434839 PDE4CQ08493 712 aa11.38□□□□□ -0.59
XIST-206ENST00000434839 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
XIST-206ENST00000434839 FGD1P98174 961 aa11.34□□□□□ -0.59
XIST-206ENST00000434839 ITGAEP38570 1179 aa11.34□□□□□ -0.59
XIST-206ENST00000434839 CECR2Q9BXF3 1484 aa11.34□□□□□ -0.59
XIST-206ENST00000434839 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
XIST-206ENST00000434839 AAMPQ13685 434 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms