RNA–Protein interactions for RNA: ENST00000270221.10

EMP3-201, Transcript of epithelial membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMP3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-201ENST00000270221 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
EMP3-201ENST00000270221 ABCC9O60706 1549 aa22.44■■□□□ 1.18
EMP3-201ENST00000270221 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
EMP3-201ENST00000270221 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
EMP3-201ENST00000270221 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
EMP3-201ENST00000270221 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
EMP3-201ENST00000270221 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
EMP3-201ENST00000270221 NACADO15069 1562 aa20.56■□□□□ 0.88
EMP3-201ENST00000270221 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
EMP3-201ENST00000270221 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
EMP3-201ENST00000270221 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
EMP3-201ENST00000270221 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
EMP3-201ENST00000270221 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
EMP3-201ENST00000270221 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
EMP3-201ENST00000270221 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
EMP3-201ENST00000270221 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
EMP3-201ENST00000270221 CUX2O14529 1486 aa19.71■□□□□ 0.75
EMP3-201ENST00000270221 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
EMP3-201ENST00000270221 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
EMP3-201ENST00000270221 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
EMP3-201ENST00000270221 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
EMP3-201ENST00000270221 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
EMP3-201ENST00000270221 NCAPD3P42695 1498 aa19■□□□□ 0.63
EMP3-201ENST00000270221 NESP48681 1621 aa19■□□□□ 0.63
EMP3-201ENST00000270221 THOC2Q8NI27 1593 aaKnown RBP18.97■□□□□ 0.63
EMP3-201ENST00000270221 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
EMP3-201ENST00000270221 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
EMP3-201ENST00000270221 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
EMP3-201ENST00000270221 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
EMP3-201ENST00000270221 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
EMP3-201ENST00000270221 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
EMP3-201ENST00000270221 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
EMP3-201ENST00000270221 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
EMP3-201ENST00000270221 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
EMP3-201ENST00000270221 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
EMP3-201ENST00000270221 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
EMP3-201ENST00000270221 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
EMP3-201ENST00000270221 WDR62O43379 1518 aa18.51■□□□□ 0.55
EMP3-201ENST00000270221 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
EMP3-201ENST00000270221 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
EMP3-201ENST00000270221 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
EMP3-201ENST00000270221 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
EMP3-201ENST00000270221 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
EMP3-201ENST00000270221 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
EMP3-201ENST00000270221 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
EMP3-201ENST00000270221 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
EMP3-201ENST00000270221 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
EMP3-201ENST00000270221 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
EMP3-201ENST00000270221 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
EMP3-201ENST00000270221 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
EMP3-201ENST00000270221 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
EMP3-201ENST00000270221 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
EMP3-201ENST00000270221 CFTRP13569 1480 aa17.98■□□□□ 0.47
EMP3-201ENST00000270221 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
EMP3-201ENST00000270221 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
EMP3-201ENST00000270221 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
EMP3-201ENST00000270221 CHD1O14646 1710 aa17.89■□□□□ 0.45
EMP3-201ENST00000270221 FBLN2P98095 1184 aa17.86■□□□□ 0.45
EMP3-201ENST00000270221 WIZO95785 1651 aa17.86■□□□□ 0.45
EMP3-201ENST00000270221 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
EMP3-201ENST00000270221 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.432e-7■■■■□ 23.4
EMP3-201ENST00000270221 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
EMP3-201ENST00000270221 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
EMP3-201ENST00000270221 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
EMP3-201ENST00000270221 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
EMP3-201ENST00000270221 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
EMP3-201ENST00000270221 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
EMP3-201ENST00000270221 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
EMP3-201ENST00000270221 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
EMP3-201ENST00000270221 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
EMP3-201ENST00000270221 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
EMP3-201ENST00000270221 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
EMP3-201ENST00000270221 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
EMP3-201ENST00000270221 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
EMP3-201ENST00000270221 KDM4FA0A1W2PPD8 638 aa17.49■□□□□ 0.39
EMP3-201ENST00000270221 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
EMP3-201ENST00000270221 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
EMP3-201ENST00000270221 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
EMP3-201ENST00000270221 SOGA1O94964 1423 aa17.42■□□□□ 0.38
EMP3-201ENST00000270221 SYNJ2O15056 1496 aa17.41■□□□□ 0.38
EMP3-201ENST00000270221 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
EMP3-201ENST00000270221 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
EMP3-201ENST00000270221 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
EMP3-201ENST00000270221 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
EMP3-201ENST00000270221 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
EMP3-201ENST00000270221 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
EMP3-201ENST00000270221 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
EMP3-201ENST00000270221 KDM6BO15054 1643 aa17.24■□□□□ 0.35
EMP3-201ENST00000270221 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
EMP3-201ENST00000270221 CEP170Q5SW79 1584 aa17.22■□□□□ 0.35
EMP3-201ENST00000270221 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
EMP3-201ENST00000270221 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
EMP3-201ENST00000270221 FBXO41Q8TF61 875 aa17.17■□□□□ 0.34
EMP3-201ENST00000270221 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
EMP3-201ENST00000270221 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
EMP3-201ENST00000270221 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
EMP3-201ENST00000270221 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
EMP3-201ENST00000270221 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
EMP3-201ENST00000270221 NUP160Q12769 1436 aa17.1■□□□□ 0.33
EMP3-201ENST00000270221 MAPKBP1O60336 1514 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms