RNA–Protein interactions for RNA: ENST00000481635.1

MTA1-212, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-212ENST00000481635 NISCHQ9Y2I1 1504 aa39.99■■■■□ 3.99
MTA1-212ENST00000481635 CCDC180Q9P1Z9 1646 aa35.98■■■■□ 3.35
MTA1-212ENST00000481635 ABCC9O60706 1549 aa35.89■■■■□ 3.34
MTA1-212ENST00000481635 RB1CC1Q8TDY2 1594 aa34.13■■■■□ 3.05
MTA1-212ENST00000481635 NACADO15069 1562 aa33.91■■■■□ 3.02
MTA1-212ENST00000481635 DNAJC5BQ9UF47 199 aa33.76■■■□□ 2.99
MTA1-212ENST00000481635 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
MTA1-212ENST00000481635 UNC13AQ9UPW8 1703 aa33.55■■■□□ 2.96
MTA1-212ENST00000481635 MYO15BQ96JP2 1530 aa33.46■■■□□ 2.95
MTA1-212ENST00000481635 PABPN1Q86U42 306 aaKnown RBP eCLIP33.44■■■□□ 2.941e-9■■□□□ 14.1
MTA1-212ENST00000481635 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
MTA1-212ENST00000481635 BICRAQ9NZM4 1560 aa33.15■■■□□ 2.9
MTA1-212ENST00000481635 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
MTA1-212ENST00000481635 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
MTA1-212ENST00000481635 SCRIBQ14160 1630 aa32.64■■■□□ 2.82
MTA1-212ENST00000481635 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
MTA1-212ENST00000481635 CECR2Q9BXF3 1484 aa32.35■■■□□ 2.77
MTA1-212ENST00000481635 EIF4G1Q04637 1599 aaKnown RBP32.34■■■□□ 2.77
MTA1-212ENST00000481635 NCAPD3P42695 1498 aa31.33■■■□□ 2.61
MTA1-212ENST00000481635 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
MTA1-212ENST00000481635 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
MTA1-212ENST00000481635 SMARCA2P51531 1590 aa31.11■■■□□ 2.57
MTA1-212ENST00000481635 HMGXB3Q12766 1538 aa31.07■■■□□ 2.56
MTA1-212ENST00000481635 DNAJC5Q9H3Z4 198 aa31.03■■■□□ 2.56
MTA1-212ENST00000481635 BAZ1AQ9NRL2 1556 aaPredicted RBP31.02■■■□□ 2.56
MTA1-212ENST00000481635 ERCC6Q03468 1493 aa30.99■■■□□ 2.55
MTA1-212ENST00000481635 PEG3Q9GZU2 1588 aa30.97■■■□□ 2.55
MTA1-212ENST00000481635 CUX2O14529 1486 aa30.97■■■□□ 2.55
MTA1-212ENST00000481635 BAZ1BQ9UIG0 1483 aaKnown RBP30.9■■■□□ 2.54
MTA1-212ENST00000481635 NESP48681 1621 aa30.83■■■□□ 2.53
MTA1-212ENST00000481635 MROH2BQ7Z745 1585 aa30.83■■■□□ 2.53
MTA1-212ENST00000481635 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
MTA1-212ENST00000481635 WIZO95785 1651 aa30.55■■■□□ 2.48
MTA1-212ENST00000481635 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
MTA1-212ENST00000481635 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
MTA1-212ENST00000481635 KIF21AQ7Z4S6 1674 aa30.41■■■□□ 2.46
MTA1-212ENST00000481635 CADPSQ9ULU8 1353 aa30.39■■■□□ 2.45
MTA1-212ENST00000481635 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
MTA1-212ENST00000481635 MRC2Q9UBG0 1479 aa30.17■■■□□ 2.42
MTA1-212ENST00000481635 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
MTA1-212ENST00000481635 WDR62O43379 1518 aa30.1■■■□□ 2.41
MTA1-212ENST00000481635 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
MTA1-212ENST00000481635 CFTRP13569 1480 aa30.02■■■□□ 2.4
MTA1-212ENST00000481635 FANCD2Q9BXW9 1451 aa30.02■■■□□ 2.4
MTA1-212ENST00000481635 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
MTA1-212ENST00000481635 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
MTA1-212ENST00000481635 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
MTA1-212ENST00000481635 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
MTA1-212ENST00000481635 OSCARQ8IYS5 282 aa29.57■■■□□ 2.32
MTA1-212ENST00000481635 IFT140Q96RY7 1462 aa29.46■■■□□ 2.31
MTA1-212ENST00000481635 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
MTA1-212ENST00000481635 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
MTA1-212ENST00000481635 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
MTA1-212ENST00000481635 DNMBPQ6XZF7 1577 aa29.31■■■□□ 2.28
MTA1-212ENST00000481635 EIF4G3O43432 1585 aaKnown RBP29.21■■■□□ 2.27
MTA1-212ENST00000481635 TARBP1Q13395 1621 aaKnown RBP29.2■■■□□ 2.27
MTA1-212ENST00000481635 AQRO60306 1485 aaKnown RBP eCLIP29.15■■■□□ 2.262e-10■■■□□ 16
MTA1-212ENST00000481635 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
MTA1-212ENST00000481635 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
MTA1-212ENST00000481635 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
MTA1-212ENST00000481635 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
MTA1-212ENST00000481635 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
MTA1-212ENST00000481635 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
MTA1-212ENST00000481635 SOGA1O94964 1423 aa29.02■■■□□ 2.24
MTA1-212ENST00000481635 CHD1O14646 1710 aa29■■■□□ 2.23
MTA1-212ENST00000481635 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
MTA1-212ENST00000481635 CUX1P39880 1505 aa28.96■■■□□ 2.23
MTA1-212ENST00000481635 FBLN2P98095 1184 aa28.96■■■□□ 2.23
MTA1-212ENST00000481635 WDR97A6NE52 1622 aa28.95■■■□□ 2.23
MTA1-212ENST00000481635 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
MTA1-212ENST00000481635 CYB5RLQ6IPT4 315 aa28.88■■■□□ 2.21
MTA1-212ENST00000481635 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
MTA1-212ENST00000481635 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
MTA1-212ENST00000481635 SUPT5HO00267 1087 aaKnown RBP28.77■■■□□ 2.2
MTA1-212ENST00000481635 GRIN2BQ13224 1484 aa28.77■■■□□ 2.2
MTA1-212ENST00000481635 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
MTA1-212ENST00000481635 CHMP7Q8WUX9 453 aaPredicted RBP28.76■■■□□ 2.19
MTA1-212ENST00000481635 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
MTA1-212ENST00000481635 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
MTA1-212ENST00000481635 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
MTA1-212ENST00000481635 ABCA5Q8WWZ7 1642 aa28.68■■■□□ 2.18
MTA1-212ENST00000481635 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
MTA1-212ENST00000481635 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
MTA1-212ENST00000481635 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
MTA1-212ENST00000481635 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
MTA1-212ENST00000481635 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
MTA1-212ENST00000481635 TRHP20396 242 aaPredicted RBP28.55■■■□□ 2.16
MTA1-212ENST00000481635 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
MTA1-212ENST00000481635 ADAMTS12P58397 1594 aa28.39■■■□□ 2.14
MTA1-212ENST00000481635 GRIN2AQ12879 1464 aa28.39■■■□□ 2.13
MTA1-212ENST00000481635 NUP160Q12769 1436 aa28.31■■■□□ 2.12
MTA1-212ENST00000481635 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
MTA1-212ENST00000481635 CEP170Q5SW79 1584 aa28.27■■■□□ 2.12
MTA1-212ENST00000481635 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
MTA1-212ENST00000481635 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
MTA1-212ENST00000481635 SHROOM2Q13796 1616 aa28.19■■■□□ 2.1
MTA1-212ENST00000481635 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
MTA1-212ENST00000481635 PRG4Q92954 1404 aaPredicted RBP28.03■■■□□ 2.08
MTA1-212ENST00000481635 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
MTA1-212ENST00000481635 CUL7Q14999 1698 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms