RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.36
SEMA4B-205ENST00000558848 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
SEMA4B-205ENST00000558848 ABCC9O60706 1549 aa26.58■■□□□ 1.85
SEMA4B-205ENST00000558848 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
SEMA4B-205ENST00000558848 NACADO15069 1562 aa25.22■■□□□ 1.63
SEMA4B-205ENST00000558848 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
SEMA4B-205ENST00000558848 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
SEMA4B-205ENST00000558848 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
SEMA4B-205ENST00000558848 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
SEMA4B-205ENST00000558848 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
SEMA4B-205ENST00000558848 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
SEMA4B-205ENST00000558848 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
SEMA4B-205ENST00000558848 DCAF1Q9Y4B6 1507 aa24.65■■□□□ 1.54
SEMA4B-205ENST00000558848 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
SEMA4B-205ENST00000558848 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
SEMA4B-205ENST00000558848 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
SEMA4B-205ENST00000558848 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
SEMA4B-205ENST00000558848 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
SEMA4B-205ENST00000558848 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
SEMA4B-205ENST00000558848 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
SEMA4B-205ENST00000558848 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
SEMA4B-205ENST00000558848 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
SEMA4B-205ENST00000558848 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
SEMA4B-205ENST00000558848 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
SEMA4B-205ENST00000558848 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
SEMA4B-205ENST00000558848 CUX2O14529 1486 aa22.96■■□□□ 1.27
SEMA4B-205ENST00000558848 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
SEMA4B-205ENST00000558848 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
SEMA4B-205ENST00000558848 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
SEMA4B-205ENST00000558848 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
SEMA4B-205ENST00000558848 NESP48681 1621 aa22.86■■□□□ 1.25
SEMA4B-205ENST00000558848 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
SEMA4B-205ENST00000558848 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
SEMA4B-205ENST00000558848 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
SEMA4B-205ENST00000558848 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
SEMA4B-205ENST00000558848 WIZO95785 1651 aa22.58■■□□□ 1.21
SEMA4B-205ENST00000558848 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
SEMA4B-205ENST00000558848 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
SEMA4B-205ENST00000558848 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
SEMA4B-205ENST00000558848 WDR62O43379 1518 aa22.36■■□□□ 1.17
SEMA4B-205ENST00000558848 CFTRP13569 1480 aa22.36■■□□□ 1.17
SEMA4B-205ENST00000558848 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
SEMA4B-205ENST00000558848 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
SEMA4B-205ENST00000558848 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
SEMA4B-205ENST00000558848 URB2Q14146 1524 aaKnown RBP22.12■■□□□ 1.13
SEMA4B-205ENST00000558848 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
SEMA4B-205ENST00000558848 PRDM2Q13029 1718 aa22■■□□□ 1.11
SEMA4B-205ENST00000558848 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
SEMA4B-205ENST00000558848 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
SEMA4B-205ENST00000558848 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
SEMA4B-205ENST00000558848 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
SEMA4B-205ENST00000558848 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
SEMA4B-205ENST00000558848 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
SEMA4B-205ENST00000558848 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
SEMA4B-205ENST00000558848 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
SEMA4B-205ENST00000558848 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
SEMA4B-205ENST00000558848 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
SEMA4B-205ENST00000558848 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.051e-7■■■■□ 24.8
SEMA4B-205ENST00000558848 RIMBP3CA6NJZ7 1639 aa21.57■■□□□ 1.04
SEMA4B-205ENST00000558848 RIMBP3BA6NNM3 1639 aa21.57■■□□□ 1.04
SEMA4B-205ENST00000558848 RIMBP3Q9UFD9 1639 aa21.57■■□□□ 1.04
SEMA4B-205ENST00000558848 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
SEMA4B-205ENST00000558848 SOGA1O94964 1423 aa21.55■■□□□ 1.04
SEMA4B-205ENST00000558848 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
SEMA4B-205ENST00000558848 CUX1P39880 1505 aa21.52■■□□□ 1.04
SEMA4B-205ENST00000558848 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
SEMA4B-205ENST00000558848 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
SEMA4B-205ENST00000558848 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
SEMA4B-205ENST00000558848 CHD1O14646 1710 aa21.46■■□□□ 1.03
SEMA4B-205ENST00000558848 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.02
SEMA4B-205ENST00000558848 FBLN2P98095 1184 aa21.39■■□□□ 1.01
SEMA4B-205ENST00000558848 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
SEMA4B-205ENST00000558848 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
SEMA4B-205ENST00000558848 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
SEMA4B-205ENST00000558848 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
SEMA4B-205ENST00000558848 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
SEMA4B-205ENST00000558848 CLASP1Q7Z460 1538 aa21.33■■□□□ 1
SEMA4B-205ENST00000558848 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
SEMA4B-205ENST00000558848 SYNJ2O15056 1496 aa21.31■■□□□ 1
SEMA4B-205ENST00000558848 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
SEMA4B-205ENST00000558848 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
SEMA4B-205ENST00000558848 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
SEMA4B-205ENST00000558848 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
SEMA4B-205ENST00000558848 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
SEMA4B-205ENST00000558848 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
SEMA4B-205ENST00000558848 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
SEMA4B-205ENST00000558848 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
SEMA4B-205ENST00000558848 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
SEMA4B-205ENST00000558848 NUP160Q12769 1436 aa21.07■□□□□ 0.96
SEMA4B-205ENST00000558848 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
SEMA4B-205ENST00000558848 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
SEMA4B-205ENST00000558848 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
SEMA4B-205ENST00000558848 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
SEMA4B-205ENST00000558848 CEP170Q5SW79 1584 aa21.01■□□□□ 0.95
SEMA4B-205ENST00000558848 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
SEMA4B-205ENST00000558848 SHROOM2Q13796 1616 aa20.95■□□□□ 0.94
SEMA4B-205ENST00000558848 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
SEMA4B-205ENST00000558848 IGF1RP08069 1367 aa20.81■□□□□ 0.92
SEMA4B-205ENST00000558848 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
SEMA4B-205ENST00000558848 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms