RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 NISCHQ9Y2I1 1504 aa55.26■■■■■ 6.44
CCDC107-203ENST00000378407 CCDC180Q9P1Z9 1646 aa49.48■■■■■ 5.51
CCDC107-203ENST00000378407 ABCC9O60706 1549 aa49.2■■■■■ 5.47
CCDC107-203ENST00000378407 RB1CC1Q8TDY2 1594 aa46.98■■■■■ 5.11
CCDC107-203ENST00000378407 NACADO15069 1562 aa46.7■■■■■ 5.07
CCDC107-203ENST00000378407 DCAF8L2P0C7V8 631 aa46.64■■■■■ 5.06
CCDC107-203ENST00000378407 MYO15BQ96JP2 1530 aa46.1■■■■■ 4.97
CCDC107-203ENST00000378407 ZCCHC6Q5VYS8 1495 aaKnown RBP45.89■■■■■ 4.94
CCDC107-203ENST00000378407 PABPN1Q86U42 306 aaKnown RBP eCLIP45.83■■■■■ 4.93
CCDC107-203ENST00000378407 UNC13AQ9UPW8 1703 aa45.8■■■■■ 4.92
CCDC107-203ENST00000378407 DNAJC5BQ9UF47 199 aa45.68■■■■■ 4.9
CCDC107-203ENST00000378407 DCAF1Q9Y4B6 1507 aa45.64■■■■■ 4.9
CCDC107-203ENST00000378407 BICRAQ9NZM4 1560 aa45.48■■■■■ 4.87
CCDC107-203ENST00000378407 SCRIBQ14160 1630 aa45.18■■■■■ 4.82
CCDC107-203ENST00000378407 SHROOM4Q9ULL8 1493 aa45■■■■■ 4.79
CCDC107-203ENST00000378407 CC2D2AQ9P2K1 1620 aa44.42■■■■■ 4.7
CCDC107-203ENST00000378407 EIF4G1Q04637 1599 aaKnown RBP44.42■■■■■ 4.7
CCDC107-203ENST00000378407 CECR2Q9BXF3 1484 aa44.28■■■■■ 4.68
CCDC107-203ENST00000378407 SMARCA4P51532 1647 aa43.07■■■■■ 4.48
CCDC107-203ENST00000378407 NCAPD3P42695 1498 aa43.06■■■■■ 4.48
CCDC107-203ENST00000378407 ATAD2BQ9ULI0 1458 aa43■■■■■ 4.47
CCDC107-203ENST00000378407 SMARCA2P51531 1590 aa42.96■■■■■ 4.47
CCDC107-203ENST00000378407 BAZ1AQ9NRL2 1556 aaPredicted RBP42.94■■■■■ 4.46
CCDC107-203ENST00000378407 HMGXB3Q12766 1538 aa42.82■■■■■ 4.45
CCDC107-203ENST00000378407 BAZ1BQ9UIG0 1483 aaKnown RBP42.69■■■■■ 4.42
CCDC107-203ENST00000378407 MROH2BQ7Z745 1585 aa42.59■■■■■ 4.41
CCDC107-203ENST00000378407 PEG3Q9GZU2 1588 aa42.59■■■■■ 4.41
CCDC107-203ENST00000378407 ERCC6Q03468 1493 aa42.55■■■■■ 4.4
CCDC107-203ENST00000378407 NESP48681 1621 aa42.31■■■■■ 4.36
CCDC107-203ENST00000378407 CUX2O14529 1486 aa42.25■■■■■ 4.35
CCDC107-203ENST00000378407 WIZO95785 1651 aa42.11■■■■■ 4.33
CCDC107-203ENST00000378407 LAMC3Q9Y6N6 1575 aa42.1■■■■■ 4.33
CCDC107-203ENST00000378407 PDS5BQ9NTI5 1447 aa41.87■■■■■ 4.29
CCDC107-203ENST00000378407 THOC2Q8NI27 1593 aaKnown RBP41.82■■■■■ 4.29
CCDC107-203ENST00000378407 RSF1Q96T23 1441 aaPredicted RBP41.82■■■■■ 4.29
CCDC107-203ENST00000378407 CADPSQ9ULU8 1353 aa41.8■■■■■ 4.28
CCDC107-203ENST00000378407 KIF21AQ7Z4S6 1674 aa41.79■■■■■ 4.28
CCDC107-203ENST00000378407 DNAJC5Q9H3Z4 198 aa41.77■■■■■ 4.28
CCDC107-203ENST00000378407 TOP2AP11388 1531 aaKnown RBP41.64■■■■■ 4.26
CCDC107-203ENST00000378407 MRC2Q9UBG0 1479 aa41.49■■■■■ 4.23
CCDC107-203ENST00000378407 CEP164Q9UPV0 1460 aa41.43■■■■■ 4.22
CCDC107-203ENST00000378407 CFTRP13569 1480 aa41.38■■■■■ 4.21
CCDC107-203ENST00000378407 FANCD2Q9BXW9 1451 aa41.38■■■■■ 4.21
CCDC107-203ENST00000378407 WDR62O43379 1518 aa41.34■■■■■ 4.21
CCDC107-203ENST00000378407 CCDC88BA6NC98 1476 aa41.11■■■■■ 4.17
CCDC107-203ENST00000378407 PRDM2Q13029 1718 aa41.02■■■■■ 4.16
CCDC107-203ENST00000378407 URB2Q14146 1524 aaKnown RBP40.97■■■■■ 4.15
CCDC107-203ENST00000378407 TOPBP1Q92547 1522 aa40.6■■■■■ 4.09
CCDC107-203ENST00000378407 ABCC8Q09428 1581 aa40.56■■■■■ 4.08
CCDC107-203ENST00000378407 IFT140Q96RY7 1462 aa40.55■■■■■ 4.08
CCDC107-203ENST00000378407 DNMBPQ6XZF7 1577 aa40.51■■■■■ 4.08
CCDC107-203ENST00000378407 ZNF608Q9ULD9 1512 aaPredicted RBP40.42■■■■■ 4.06
CCDC107-203ENST00000378407 OSCARQ8IYS5 282 aa40.37■■■■■ 4.05
CCDC107-203ENST00000378407 SUPT5HO00267 1087 aaKnown RBP40.33■■■■■ 4.05
CCDC107-203ENST00000378407 EIF4G3O43432 1585 aaKnown RBP40.27■■■■■ 4.04
CCDC107-203ENST00000378407 TRIM41Q8WV44 630 aa40.24■■■■■ 4.03
CCDC107-203ENST00000378407 POLA1P09884 1462 aaPredicted RBP40.21■■■■■ 4.03
CCDC107-203ENST00000378407 TARBP1Q13395 1621 aaKnown RBP40.18■■■■■ 4.02
CCDC107-203ENST00000378407 AQRO60306 1485 aaKnown RBP eCLIP40.09■■■■■ 4.012e-8■■■■□ 19.7
CCDC107-203ENST00000378407 RAD54L2Q9Y4B4 1467 aa40.05■■■■■ 4
CCDC107-203ENST00000378407 SOGA1O94964 1423 aa40.04■■■■■ 4
CCDC107-203ENST00000378407 FGD5Q6ZNL6 1462 aa40.03■■■■■ 4
CCDC107-203ENST00000378407 CUX1P39880 1505 aa40.01■■■■■ 4
CCDC107-203ENST00000378407 TDRD9Q8NDG6 1382 aaKnown RBP39.92■■■■□ 3.98
CCDC107-203ENST00000378407 FBLN2P98095 1184 aa39.88■■■■□ 3.97
CCDC107-203ENST00000378407 CHD1O14646 1710 aa39.87■■■■□ 3.97
CCDC107-203ENST00000378407 WDR97A6NE52 1622 aa39.85■■■■□ 3.97
CCDC107-203ENST00000378407 RIMBP3CA6NJZ7 1639 aa39.81■■■■□ 3.96
CCDC107-203ENST00000378407 RIMBP3BA6NNM3 1639 aa39.81■■■■□ 3.96
CCDC107-203ENST00000378407 RIMBP3Q9UFD9 1639 aa39.81■■■■□ 3.96
CCDC107-203ENST00000378407 SNAPC4Q5SXM2 1469 aa39.75■■■■□ 3.95
CCDC107-203ENST00000378407 ARHGEF11O15085 1522 aa39.74■■■■□ 3.95
CCDC107-203ENST00000378407 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
CCDC107-203ENST00000378407 MAGI1Q96QZ7 1491 aaPredicted RBP39.64■■■■□ 3.94
CCDC107-203ENST00000378407 CHMP7Q8WUX9 453 aaPredicted RBP39.6■■■■□ 3.93
CCDC107-203ENST00000378407 GAPVD1Q14C86 1478 aa39.58■■■■□ 3.93
CCDC107-203ENST00000378407 ABCA10Q8WWZ4 1543 aa39.56■■■■□ 3.92
CCDC107-203ENST00000378407 PBRM1Q86U86 1689 aa39.54■■■■□ 3.92
CCDC107-203ENST00000378407 WRNQ14191 1432 aaPredicted RBP eCLIP39.52■■■■□ 3.92
CCDC107-203ENST00000378407 SYNJ2O15056 1496 aa39.5■■■■□ 3.91
CCDC107-203ENST00000378407 SYNJ1O43426 1573 aa39.49■■■■□ 3.91
CCDC107-203ENST00000378407 ABCA5Q8WWZ7 1642 aa39.48■■■■□ 3.91
CCDC107-203ENST00000378407 TOP2BQ02880 1626 aa39.47■■■■□ 3.91
CCDC107-203ENST00000378407 BIVM-ERCC5R4GMW8 1640 aa39.47■■■■□ 3.91
CCDC107-203ENST00000378407 CYB5RLQ6IPT4 315 aa39.43■■■■□ 3.9
CCDC107-203ENST00000378407 CLASP1Q7Z460 1538 aa39.4■■■■□ 3.9
CCDC107-203ENST00000378407 ARAP1Q96P48 1450 aa39.35■■■■□ 3.89
CCDC107-203ENST00000378407 ADAMTS12P58397 1594 aa39.2■■■■□ 3.87
CCDC107-203ENST00000378407 GRIN2AQ12879 1464 aa39.16■■■■□ 3.86
CCDC107-203ENST00000378407 ERICH3Q5RHP9 1530 aa39.09■■■■□ 3.85
CCDC107-203ENST00000378407 FHAD1B1AJZ9 1412 aa39.09■■■■□ 3.85
CCDC107-203ENST00000378407 CEP170Q5SW79 1584 aa38.98■■■■□ 3.83
CCDC107-203ENST00000378407 TRHP20396 242 aaPredicted RBP38.97■■■■□ 3.83
CCDC107-203ENST00000378407 NUP160Q12769 1436 aa38.97■■■■□ 3.83
CCDC107-203ENST00000378407 ERCC6L2Q5T890 1561 aa38.79■■■■□ 3.8
CCDC107-203ENST00000378407 KIF27Q86VH2 1401 aa38.77■■■■□ 3.8
CCDC107-203ENST00000378407 SHROOM2Q13796 1616 aa38.74■■■■□ 3.79
CCDC107-203ENST00000378407 RUSC2Q8N2Y8 1516 aa38.64■■■■□ 3.78
CCDC107-203ENST00000378407 CUL7Q14999 1698 aa38.63■■■■□ 3.77
CCDC107-203ENST00000378407 PRG4Q92954 1404 aaPredicted RBP38.62■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms