RNA–Protein interactions for RNA: ENST00000597529.1

EMP3-207, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 437 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-207ENST00000597529 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
EMP3-207ENST00000597529 ABCC9O60706 1549 aa24.92■■□□□ 1.58
EMP3-207ENST00000597529 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
EMP3-207ENST00000597529 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
EMP3-207ENST00000597529 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
EMP3-207ENST00000597529 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
EMP3-207ENST00000597529 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
EMP3-207ENST00000597529 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
EMP3-207ENST00000597529 UNC13AQ9UPW8 1703 aa22.47■■□□□ 1.19
EMP3-207ENST00000597529 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
EMP3-207ENST00000597529 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
EMP3-207ENST00000597529 NACADO15069 1562 aa22.38■■□□□ 1.17
EMP3-207ENST00000597529 CC2D2AQ9P2K1 1620 aa22.33■■□□□ 1.17
EMP3-207ENST00000597529 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
EMP3-207ENST00000597529 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
EMP3-207ENST00000597529 CUX2O14529 1486 aa21.76■■□□□ 1.07
EMP3-207ENST00000597529 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
EMP3-207ENST00000597529 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
EMP3-207ENST00000597529 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
EMP3-207ENST00000597529 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
EMP3-207ENST00000597529 NESP48681 1621 aa21.07■□□□□ 0.96
EMP3-207ENST00000597529 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
EMP3-207ENST00000597529 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
EMP3-207ENST00000597529 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
EMP3-207ENST00000597529 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
EMP3-207ENST00000597529 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
EMP3-207ENST00000597529 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
EMP3-207ENST00000597529 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
EMP3-207ENST00000597529 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
EMP3-207ENST00000597529 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
EMP3-207ENST00000597529 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
EMP3-207ENST00000597529 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
EMP3-207ENST00000597529 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
EMP3-207ENST00000597529 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
EMP3-207ENST00000597529 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
EMP3-207ENST00000597529 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
EMP3-207ENST00000597529 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
EMP3-207ENST00000597529 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
EMP3-207ENST00000597529 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
EMP3-207ENST00000597529 ILDR1Q86SU0 546 aaPredicted RBP20.37■□□□□ 0.85
EMP3-207ENST00000597529 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
EMP3-207ENST00000597529 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
EMP3-207ENST00000597529 WDR62O43379 1518 aa20.31■□□□□ 0.84
EMP3-207ENST00000597529 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
EMP3-207ENST00000597529 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
EMP3-207ENST00000597529 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
EMP3-207ENST00000597529 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
EMP3-207ENST00000597529 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
EMP3-207ENST00000597529 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
EMP3-207ENST00000597529 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
EMP3-207ENST00000597529 URB2Q14146 1524 aaKnown RBP19.87■□□□□ 0.77
EMP3-207ENST00000597529 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
EMP3-207ENST00000597529 FBLN2P98095 1184 aa19.79■□□□□ 0.76
EMP3-207ENST00000597529 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
EMP3-207ENST00000597529 CHD1O14646 1710 aa19.74■□□□□ 0.75
EMP3-207ENST00000597529 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
EMP3-207ENST00000597529 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
EMP3-207ENST00000597529 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
EMP3-207ENST00000597529 KDM4FA0A1W2PPD8 638 aa19.59■□□□□ 0.73
EMP3-207ENST00000597529 AQRO60306 1485 aaKnown RBP eCLIP19.56■□□□□ 0.722e-7■■■■□ 23.4
EMP3-207ENST00000597529 CFTRP13569 1480 aa19.56■□□□□ 0.72
EMP3-207ENST00000597529 WIZO95785 1651 aa19.48■□□□□ 0.71
EMP3-207ENST00000597529 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
EMP3-207ENST00000597529 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
EMP3-207ENST00000597529 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
EMP3-207ENST00000597529 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
EMP3-207ENST00000597529 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
EMP3-207ENST00000597529 KIF13AQ9H1H9 1805 aa19.26■□□□□ 0.67
EMP3-207ENST00000597529 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
EMP3-207ENST00000597529 SNAPC4Q5SXM2 1469 aa19.26■□□□□ 0.67
EMP3-207ENST00000597529 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
EMP3-207ENST00000597529 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
EMP3-207ENST00000597529 ERCC6L2Q5T890 1561 aa19.21■□□□□ 0.67
EMP3-207ENST00000597529 HECW2Q9P2P5 1572 aa19.21■□□□□ 0.67
EMP3-207ENST00000597529 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
EMP3-207ENST00000597529 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
EMP3-207ENST00000597529 PRDM2Q13029 1718 aa19.15■□□□□ 0.66
EMP3-207ENST00000597529 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
EMP3-207ENST00000597529 FAM69CQ0P6D2 419 aa19.13■□□□□ 0.65
EMP3-207ENST00000597529 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
EMP3-207ENST00000597529 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
EMP3-207ENST00000597529 KDM6BO15054 1643 aa19.07■□□□□ 0.64
EMP3-207ENST00000597529 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
EMP3-207ENST00000597529 ADGRL1O94910 1474 aa19.05■□□□□ 0.64
EMP3-207ENST00000597529 SOCS7O14512 581 aa19.03■□□□□ 0.64
EMP3-207ENST00000597529 SOGA1O94964 1423 aa19.02■□□□□ 0.64
EMP3-207ENST00000597529 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
EMP3-207ENST00000597529 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
EMP3-207ENST00000597529 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
EMP3-207ENST00000597529 ABCC10Q5T3U5 1492 aa18.95■□□□□ 0.62
EMP3-207ENST00000597529 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
EMP3-207ENST00000597529 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
EMP3-207ENST00000597529 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
EMP3-207ENST00000597529 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
EMP3-207ENST00000597529 DISP3Q9P2K9 1392 aa18.88■□□□□ 0.61
EMP3-207ENST00000597529 DIP2BQ9P265 1576 aa18.88■□□□□ 0.61
EMP3-207ENST00000597529 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
EMP3-207ENST00000597529 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
EMP3-207ENST00000597529 PBRM1Q86U86 1689 aa18.79■□□□□ 0.6
EMP3-207ENST00000597529 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms