RNA–Protein interactions for RNA: ENST00000582736.1

RPL23A-209, Transcript of ribosomal protein L23a, humanhuman

TSL 1 (best)

Gene RPL23A, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-209ENST00000582736 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
RPL23A-209ENST00000582736 ABCC9O60706 1549 aa34.96■■■■□ 3.19
RPL23A-209ENST00000582736 CCDC180Q9P1Z9 1646 aa34.24■■■■□ 3.07
RPL23A-209ENST00000582736 DNAJC5BQ9UF47 199 aa33.49■■■□□ 2.95
RPL23A-209ENST00000582736 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
RPL23A-209ENST00000582736 NACADO15069 1562 aa32.53■■■□□ 2.8
RPL23A-209ENST00000582736 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
RPL23A-209ENST00000582736 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
RPL23A-209ENST00000582736 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
RPL23A-209ENST00000582736 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
RPL23A-209ENST00000582736 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
RPL23A-209ENST00000582736 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
RPL23A-209ENST00000582736 CC2D2AQ9P2K1 1620 aa31.56■■■□□ 2.64
RPL23A-209ENST00000582736 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
RPL23A-209ENST00000582736 EIF4G1Q04637 1599 aaKnown RBP31.31■■■□□ 2.6
RPL23A-209ENST00000582736 DNAJC5Q9H3Z4 198 aa31.27■■■□□ 2.6
RPL23A-209ENST00000582736 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
RPL23A-209ENST00000582736 DCAF1Q9Y4B6 1507 aa31.17■■■□□ 2.58
RPL23A-209ENST00000582736 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
RPL23A-209ENST00000582736 CUX2O14529 1486 aa30.45■■■□□ 2.47
RPL23A-209ENST00000582736 ERCC6Q03468 1493 aa30.21■■■□□ 2.43
RPL23A-209ENST00000582736 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
RPL23A-209ENST00000582736 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
RPL23A-209ENST00000582736 NESP48681 1621 aa29.85■■■□□ 2.37
RPL23A-209ENST00000582736 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
RPL23A-209ENST00000582736 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
RPL23A-209ENST00000582736 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
RPL23A-209ENST00000582736 SMARCA4P51532 1647 aa29.65■■■□□ 2.34
RPL23A-209ENST00000582736 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
RPL23A-209ENST00000582736 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
RPL23A-209ENST00000582736 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
RPL23A-209ENST00000582736 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
RPL23A-209ENST00000582736 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
RPL23A-209ENST00000582736 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
RPL23A-209ENST00000582736 PDS5BQ9NTI5 1447 aa29.31■■■□□ 2.28
RPL23A-209ENST00000582736 MRC2Q9UBG0 1479 aa29.15■■■□□ 2.26
RPL23A-209ENST00000582736 WDR62O43379 1518 aa29.12■■■□□ 2.25
RPL23A-209ENST00000582736 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
RPL23A-209ENST00000582736 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
RPL23A-209ENST00000582736 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
RPL23A-209ENST00000582736 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
RPL23A-209ENST00000582736 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
RPL23A-209ENST00000582736 WIZO95785 1651 aa28.71■■■□□ 2.19
RPL23A-209ENST00000582736 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
RPL23A-209ENST00000582736 RIMBP3BA6NNM3 1639 aa28.66■■■□□ 2.18
RPL23A-209ENST00000582736 RIMBP3Q9UFD9 1639 aa28.66■■■□□ 2.18
RPL23A-209ENST00000582736 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
RPL23A-209ENST00000582736 CFTRP13569 1480 aa28.61■■■□□ 2.17
RPL23A-209ENST00000582736 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
RPL23A-209ENST00000582736 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
RPL23A-209ENST00000582736 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
RPL23A-209ENST00000582736 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
RPL23A-209ENST00000582736 PRDM2Q13029 1718 aa28.26■■■□□ 2.11
RPL23A-209ENST00000582736 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
RPL23A-209ENST00000582736 RSF1Q96T23 1441 aaPredicted RBP28.22■■■□□ 2.11
RPL23A-209ENST00000582736 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
RPL23A-209ENST00000582736 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
RPL23A-209ENST00000582736 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
RPL23A-209ENST00000582736 TRHP20396 242 aaPredicted RBP28.14■■■□□ 2.1
RPL23A-209ENST00000582736 CHD1O14646 1710 aa28.1■■■□□ 2.09
RPL23A-209ENST00000582736 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.073e-12■■■■■ 36.1
RPL23A-209ENST00000582736 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
RPL23A-209ENST00000582736 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
RPL23A-209ENST00000582736 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
RPL23A-209ENST00000582736 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
RPL23A-209ENST00000582736 FBLN2P98095 1184 aa27.88■■■□□ 2.05
RPL23A-209ENST00000582736 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
RPL23A-209ENST00000582736 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.04
RPL23A-209ENST00000582736 CLASP1Q7Z460 1538 aa27.8■■■□□ 2.04
RPL23A-209ENST00000582736 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
RPL23A-209ENST00000582736 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.03
RPL23A-209ENST00000582736 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
RPL23A-209ENST00000582736 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
RPL23A-209ENST00000582736 SOGA1O94964 1423 aa27.63■■■□□ 2.01
RPL23A-209ENST00000582736 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
RPL23A-209ENST00000582736 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
RPL23A-209ENST00000582736 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
RPL23A-209ENST00000582736 FGD5Q6ZNL6 1462 aa27.53■■■□□ 2
RPL23A-209ENST00000582736 GAPVD1Q14C86 1478 aa27.51■■■□□ 2
RPL23A-209ENST00000582736 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
RPL23A-209ENST00000582736 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
RPL23A-209ENST00000582736 CUX1P39880 1505 aa27.4■■□□□ 1.98
RPL23A-209ENST00000582736 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
RPL23A-209ENST00000582736 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
RPL23A-209ENST00000582736 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
RPL23A-209ENST00000582736 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
RPL23A-209ENST00000582736 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
RPL23A-209ENST00000582736 GRIN2AQ12879 1464 aa27.16■■□□□ 1.94
RPL23A-209ENST00000582736 KIF13AQ9H1H9 1805 aa27.14■■□□□ 1.94
RPL23A-209ENST00000582736 NUP160Q12769 1436 aa27.12■■□□□ 1.93
RPL23A-209ENST00000582736 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
RPL23A-209ENST00000582736 ADAMTS12P58397 1594 aa27.08■■□□□ 1.93
RPL23A-209ENST00000582736 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
RPL23A-209ENST00000582736 ABCC10Q5T3U5 1492 aa26.89■■□□□ 1.9
RPL23A-209ENST00000582736 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
RPL23A-209ENST00000582736 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
RPL23A-209ENST00000582736 KDM4FA0A1W2PPD8 638 aa26.84■■□□□ 1.89
RPL23A-209ENST00000582736 FAM69CQ0P6D2 419 aa26.84■■□□□ 1.89
RPL23A-209ENST00000582736 DIP2BQ9P265 1576 aa26.84■■□□□ 1.89
RPL23A-209ENST00000582736 MAPKBP1O60336 1514 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms