RNA–Protein interactions for RNA: ENST00000421582.2

CCDC107-205, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-205ENST00000421582 NISCHQ9Y2I1 1504 aa55.16■■■■■ 6.42
CCDC107-205ENST00000421582 CCDC180Q9P1Z9 1646 aa49.35■■■■■ 5.49
CCDC107-205ENST00000421582 ABCC9O60706 1549 aa49.07■■■■■ 5.45
CCDC107-205ENST00000421582 RB1CC1Q8TDY2 1594 aa46.79■■■■■ 5.08
CCDC107-205ENST00000421582 NACADO15069 1562 aa46.54■■■■■ 5.04
CCDC107-205ENST00000421582 DCAF8L2P0C7V8 631 aa46.33■■■■■ 5.01
CCDC107-205ENST00000421582 MYO15BQ96JP2 1530 aa46■■■■■ 4.95
CCDC107-205ENST00000421582 UNC13AQ9UPW8 1703 aa45.83■■■■■ 4.93
CCDC107-205ENST00000421582 ZCCHC6Q5VYS8 1495 aaKnown RBP45.82■■■■■ 4.93
CCDC107-205ENST00000421582 DNAJC5BQ9UF47 199 aa45.75■■■■■ 4.91
CCDC107-205ENST00000421582 PABPN1Q86U42 306 aaKnown RBP eCLIP45.71■■■■■ 4.91
CCDC107-205ENST00000421582 DCAF1Q9Y4B6 1507 aa45.55■■■■■ 4.88
CCDC107-205ENST00000421582 BICRAQ9NZM4 1560 aa45.5■■■■■ 4.87
CCDC107-205ENST00000421582 SCRIBQ14160 1630 aa45.05■■■■■ 4.8
CCDC107-205ENST00000421582 SHROOM4Q9ULL8 1493 aa44.83■■■■■ 4.77
CCDC107-205ENST00000421582 CC2D2AQ9P2K1 1620 aa44.34■■■■■ 4.69
CCDC107-205ENST00000421582 EIF4G1Q04637 1599 aaKnown RBP44.33■■■■■ 4.69
CCDC107-205ENST00000421582 CECR2Q9BXF3 1484 aa44.14■■■■■ 4.66
CCDC107-205ENST00000421582 SMARCA4P51532 1647 aa42.98■■■■■ 4.47
CCDC107-205ENST00000421582 NCAPD3P42695 1498 aa42.97■■■■■ 4.47
CCDC107-205ENST00000421582 ATAD2BQ9ULI0 1458 aa42.93■■■■■ 4.46
CCDC107-205ENST00000421582 SMARCA2P51531 1590 aa42.78■■■■■ 4.44
CCDC107-205ENST00000421582 BAZ1AQ9NRL2 1556 aaPredicted RBP42.77■■■■■ 4.44
CCDC107-205ENST00000421582 HMGXB3Q12766 1538 aa42.71■■■■■ 4.43
CCDC107-205ENST00000421582 PEG3Q9GZU2 1588 aa42.55■■■■■ 4.4
CCDC107-205ENST00000421582 MROH2BQ7Z745 1585 aa42.54■■■■■ 4.4
CCDC107-205ENST00000421582 BAZ1BQ9UIG0 1483 aaKnown RBP42.52■■■■■ 4.4
CCDC107-205ENST00000421582 ERCC6Q03468 1493 aa42.3■■■■■ 4.36
CCDC107-205ENST00000421582 NESP48681 1621 aa42.27■■■■■ 4.36
CCDC107-205ENST00000421582 CUX2O14529 1486 aa42.1■■■■■ 4.33
CCDC107-205ENST00000421582 WIZO95785 1651 aa42.05■■■■■ 4.32
CCDC107-205ENST00000421582 LAMC3Q9Y6N6 1575 aa41.96■■■■■ 4.31
CCDC107-205ENST00000421582 THOC2Q8NI27 1593 aaKnown RBP41.79■■■■■ 4.28
CCDC107-205ENST00000421582 RSF1Q96T23 1441 aaPredicted RBP41.76■■■■■ 4.28
CCDC107-205ENST00000421582 KIF21AQ7Z4S6 1674 aa41.74■■■■■ 4.27
CCDC107-205ENST00000421582 CADPSQ9ULU8 1353 aa41.68■■■■■ 4.26
CCDC107-205ENST00000421582 DNAJC5Q9H3Z4 198 aa41.68■■■■■ 4.26
CCDC107-205ENST00000421582 PDS5BQ9NTI5 1447 aa41.66■■■■■ 4.26
CCDC107-205ENST00000421582 TOP2AP11388 1531 aaKnown RBP41.52■■■■■ 4.24
CCDC107-205ENST00000421582 MRC2Q9UBG0 1479 aa41.35■■■■■ 4.21
CCDC107-205ENST00000421582 CFTRP13569 1480 aa41.3■■■■■ 4.2
CCDC107-205ENST00000421582 WDR62O43379 1518 aa41.26■■■■■ 4.2
CCDC107-205ENST00000421582 FANCD2Q9BXW9 1451 aa41.24■■■■■ 4.19
CCDC107-205ENST00000421582 CEP164Q9UPV0 1460 aa41.24■■■■■ 4.19
CCDC107-205ENST00000421582 CCDC88BA6NC98 1476 aa41.04■■■■■ 4.16
CCDC107-205ENST00000421582 PRDM2Q13029 1718 aa40.92■■■■■ 4.14
CCDC107-205ENST00000421582 URB2Q14146 1524 aaKnown RBP40.92■■■■■ 4.14
CCDC107-205ENST00000421582 TOPBP1Q92547 1522 aa40.51■■■■■ 4.08
CCDC107-205ENST00000421582 IFT140Q96RY7 1462 aa40.39■■■■■ 4.06
CCDC107-205ENST00000421582 DNMBPQ6XZF7 1577 aa40.38■■■■■ 4.06
CCDC107-205ENST00000421582 ZNF608Q9ULD9 1512 aaPredicted RBP40.37■■■■■ 4.05
CCDC107-205ENST00000421582 ABCC8Q09428 1581 aa40.34■■■■■ 4.05
CCDC107-205ENST00000421582 OSCARQ8IYS5 282 aa40.16■■■■■ 4.02
CCDC107-205ENST00000421582 EIF4G3O43432 1585 aaKnown RBP40.16■■■■■ 4.02
CCDC107-205ENST00000421582 TARBP1Q13395 1621 aaKnown RBP40.14■■■■■ 4.02
CCDC107-205ENST00000421582 POLA1P09884 1462 aaPredicted RBP40.13■■■■■ 4.01
CCDC107-205ENST00000421582 SUPT5HO00267 1087 aaKnown RBP40.1■■■■■ 4.01
CCDC107-205ENST00000421582 TRIM41Q8WV44 630 aa40.02■■■■■ 4
CCDC107-205ENST00000421582 AQRO60306 1485 aaKnown RBP eCLIP40.01■■■■■ 42e-8■■■■□ 19.7
CCDC107-205ENST00000421582 RAD54L2Q9Y4B4 1467 aa39.98■■■■□ 3.99
CCDC107-205ENST00000421582 CUX1P39880 1505 aa39.96■■■■□ 3.99
CCDC107-205ENST00000421582 FGD5Q6ZNL6 1462 aa39.92■■■■□ 3.98
CCDC107-205ENST00000421582 SOGA1O94964 1423 aa39.89■■■■□ 3.98
CCDC107-205ENST00000421582 TDRD9Q8NDG6 1382 aaKnown RBP39.8■■■■□ 3.96
CCDC107-205ENST00000421582 CHD1O14646 1710 aa39.79■■■■□ 3.96
CCDC107-205ENST00000421582 RIMBP3CA6NJZ7 1639 aa39.73■■■■□ 3.95
CCDC107-205ENST00000421582 RIMBP3BA6NNM3 1639 aa39.73■■■■□ 3.95
CCDC107-205ENST00000421582 RIMBP3Q9UFD9 1639 aa39.73■■■■□ 3.95
CCDC107-205ENST00000421582 WDR97A6NE52 1622 aa39.68■■■■□ 3.94
CCDC107-205ENST00000421582 ARHGEF11O15085 1522 aa39.63■■■■□ 3.93
CCDC107-205ENST00000421582 SNAPC4Q5SXM2 1469 aa39.63■■■■□ 3.93
CCDC107-205ENST00000421582 FBLN2P98095 1184 aa39.61■■■■□ 3.93
CCDC107-205ENST00000421582 GRIN2BQ13224 1484 aa39.51■■■■□ 3.92
CCDC107-205ENST00000421582 MAGI1Q96QZ7 1491 aaPredicted RBP39.49■■■■□ 3.91
CCDC107-205ENST00000421582 ABCA10Q8WWZ4 1543 aa39.46■■■■□ 3.91
CCDC107-205ENST00000421582 PBRM1Q86U86 1689 aa39.44■■■■□ 3.9
CCDC107-205ENST00000421582 GAPVD1Q14C86 1478 aa39.43■■■■□ 3.9
CCDC107-205ENST00000421582 ABCA5Q8WWZ7 1642 aa39.41■■■■□ 3.9
CCDC107-205ENST00000421582 SYNJ1O43426 1573 aa39.39■■■■□ 3.9
CCDC107-205ENST00000421582 BIVM-ERCC5R4GMW8 1640 aa39.38■■■■□ 3.89
CCDC107-205ENST00000421582 TOP2BQ02880 1626 aa39.37■■■■□ 3.89
CCDC107-205ENST00000421582 WRNQ14191 1432 aaPredicted RBP eCLIP39.36■■■■□ 3.89
CCDC107-205ENST00000421582 SYNJ2O15056 1496 aa39.36■■■■□ 3.89
CCDC107-205ENST00000421582 CHMP7Q8WUX9 453 aaPredicted RBP39.36■■■■□ 3.89
CCDC107-205ENST00000421582 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
CCDC107-205ENST00000421582 ARAP1Q96P48 1450 aa39.29■■■■□ 3.88
CCDC107-205ENST00000421582 CYB5RLQ6IPT4 315 aa39.25■■■■□ 3.87
CCDC107-205ENST00000421582 ADAMTS12P58397 1594 aa39.1■■■■□ 3.85
CCDC107-205ENST00000421582 GRIN2AQ12879 1464 aa39.04■■■■□ 3.84
CCDC107-205ENST00000421582 ERICH3Q5RHP9 1530 aa38.95■■■■□ 3.83
CCDC107-205ENST00000421582 CEP170Q5SW79 1584 aa38.93■■■■□ 3.82
CCDC107-205ENST00000421582 FHAD1B1AJZ9 1412 aa38.92■■■■□ 3.82
CCDC107-205ENST00000421582 NUP160Q12769 1436 aa38.9■■■■□ 3.82
CCDC107-205ENST00000421582 ERCC6L2Q5T890 1561 aa38.8■■■■□ 3.8
CCDC107-205ENST00000421582 SHROOM2Q13796 1616 aa38.71■■■■□ 3.79
CCDC107-205ENST00000421582 TRHP20396 242 aaPredicted RBP38.68■■■■□ 3.78
CCDC107-205ENST00000421582 KIF27Q86VH2 1401 aa38.56■■■■□ 3.76
CCDC107-205ENST00000421582 RUSC2Q8N2Y8 1516 aa38.55■■■■□ 3.76
CCDC107-205ENST00000421582 IGF1RP08069 1367 aa38.53■■■■□ 3.76
CCDC107-205ENST00000421582 PRG4Q92954 1404 aaPredicted RBP38.48■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms