RNA–Protein interactions for RNA: ENST00000462913.1

SFXN4-205, Transcript of sideroflexin 4, humanhuman

TSL 5

Gene SFXN4, Length 278 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-205ENST00000462913 AEBP2Q6ZN18 517 aaPredicted RBP29.56■■■□□ 2.32
SFXN4-205ENST00000462913 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
SFXN4-205ENST00000462913 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
SFXN4-205ENST00000462913 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
SFXN4-205ENST00000462913 FOXD1Q16676 465 aa23.49■■□□□ 1.35
SFXN4-205ENST00000462913 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
SFXN4-205ENST00000462913 MSH5O43196 834 aa22.03■■□□□ 1.12
SFXN4-205ENST00000462913 PIAS4Q8N2W9 510 aaPredicted RBP22.02■■□□□ 1.12
SFXN4-205ENST00000462913 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
SFXN4-205ENST00000462913 ADRA2BP18089 450 aa21.98■■□□□ 1.11
SFXN4-205ENST00000462913 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
SFXN4-205ENST00000462913 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
SFXN4-205ENST00000462913 MAPK8IP2Q13387 824 aaPredicted RBP20.13■□□□□ 0.81
SFXN4-205ENST00000462913 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
SFXN4-205ENST00000462913 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
SFXN4-205ENST00000462913 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
SFXN4-205ENST00000462913 HOXD11P31277 338 aaPredicted RBP19.37■□□□□ 0.69
SFXN4-205ENST00000462913 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
SFXN4-205ENST00000462913 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
SFXN4-205ENST00000462913 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
SFXN4-205ENST00000462913 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
SFXN4-205ENST00000462913 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
SFXN4-205ENST00000462913 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
SFXN4-205ENST00000462913 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
SFXN4-205ENST00000462913 KCNA4P22459 653 aa18.56■□□□□ 0.56
SFXN4-205ENST00000462913 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
SFXN4-205ENST00000462913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.55
SFXN4-205ENST00000462913 U3KPZ7 1027 aaPredicted RBP18.05■□□□□ 0.48
SFXN4-205ENST00000462913 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
SFXN4-205ENST00000462913 CAPN15O75808 1086 aa17.74■□□□□ 0.43
SFXN4-205ENST00000462913 SPINK5Q9NQ38 1064 aaPredicted RBP17.73■□□□□ 0.43
SFXN4-205ENST00000462913 APLP2Q06481 763 aa17.7■□□□□ 0.42
SFXN4-205ENST00000462913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.69■□□□□ 0.42
SFXN4-205ENST00000462913 HNRNPUL2Q1KMD3 747 aaKnown RBP17.69■□□□□ 0.42
SFXN4-205ENST00000462913 DSG3P32926 999 aa17.6■□□□□ 0.41
SFXN4-205ENST00000462913 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
SFXN4-205ENST00000462913 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
SFXN4-205ENST00000462913 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
SFXN4-205ENST00000462913 MYCNP04198 464 aaPredicted RBP17.47■□□□□ 0.39
SFXN4-205ENST00000462913 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
SFXN4-205ENST00000462913 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
SFXN4-205ENST00000462913 ABCB7O75027 752 aa17.3■□□□□ 0.36
SFXN4-205ENST00000462913 ZBTB22O15209 634 aa17.03■□□□□ 0.32
SFXN4-205ENST00000462913 POLA2Q14181 598 aa17.03■□□□□ 0.32
SFXN4-205ENST00000462913 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
SFXN4-205ENST00000462913 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
SFXN4-205ENST00000462913 ATXN8OSP0DMR3 200 aa16.84■□□□□ 0.29
SFXN4-205ENST00000462913 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
SFXN4-205ENST00000462913 POTEHQ6S545 545 aa16.67■□□□□ 0.26
SFXN4-205ENST00000462913 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
SFXN4-205ENST00000462913 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
SFXN4-205ENST00000462913 FBLN2P98095 1184 aa16.41■□□□□ 0.22
SFXN4-205ENST00000462913 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
SFXN4-205ENST00000462913 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
SFXN4-205ENST00000462913 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
SFXN4-205ENST00000462913 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
SFXN4-205ENST00000462913 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
SFXN4-205ENST00000462913 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
SFXN4-205ENST00000462913 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
SFXN4-205ENST00000462913 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
SFXN4-205ENST00000462913 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
SFXN4-205ENST00000462913 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
SFXN4-205ENST00000462913 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
SFXN4-205ENST00000462913 PIP4P2Q8N4L2 257 aa16.01■□□□□ 0.15
SFXN4-205ENST00000462913 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
SFXN4-205ENST00000462913 SPDYE1Q8NFV5 336 aaPredicted RBP15.94■□□□□ 0.14
SFXN4-205ENST00000462913 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
SFXN4-205ENST00000462913 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
SFXN4-205ENST00000462913 HAX1O00165 279 aa15.7■□□□□ 0.1
SFXN4-205ENST00000462913 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
SFXN4-205ENST00000462913 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
SFXN4-205ENST00000462913 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
SFXN4-205ENST00000462913 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
SFXN4-205ENST00000462913 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
SFXN4-205ENST00000462913 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
SFXN4-205ENST00000462913 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
SFXN4-205ENST00000462913 EVX2Q03828 476 aa15.44■□□□□ 0.06
SFXN4-205ENST00000462913 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
SFXN4-205ENST00000462913 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
SFXN4-205ENST00000462913 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
SFXN4-205ENST00000462913 PROM2Q8N271 834 aa15.2■□□□□ 0.02
SFXN4-205ENST00000462913 GABBR2O75899 941 aa15.16■□□□□ 0.02
SFXN4-205ENST00000462913 CLCN6P51797 869 aa15.09■□□□□ 0.01
SFXN4-205ENST00000462913 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
SFXN4-205ENST00000462913 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
SFXN4-205ENST00000462913 ZNF579Q8NAF0 562 aaKnown RBP15□□□□□ -0.01
SFXN4-205ENST00000462913 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
SFXN4-205ENST00000462913 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
SFXN4-205ENST00000462913 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
SFXN4-205ENST00000462913 FKBP8Q14318 412 aa14.88□□□□□ -0.03
SFXN4-205ENST00000462913 MIER1Q8N108 512 aa14.83□□□□□ -0.04
SFXN4-205ENST00000462913 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
SFXN4-205ENST00000462913 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
SFXN4-205ENST00000462913 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
SFXN4-205ENST00000462913 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
SFXN4-205ENST00000462913 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
SFXN4-205ENST00000462913 LHX8Q68G74 356 aa14.71□□□□□ -0.05
SFXN4-205ENST00000462913 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
SFXN4-205ENST00000462913 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
SFXN4-205ENST00000462913 CCDC61Q9Y6R9 512 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms