RNA–Protein interactions for RNA: ENST00000279839.7

CWC15-201, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CWC15, Length 1,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-201ENST00000279839 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
CWC15-201ENST00000279839 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
CWC15-201ENST00000279839 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
CWC15-201ENST00000279839 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
CWC15-201ENST00000279839 FOXD1Q16676 465 aa20.04■□□□□ 0.8
CWC15-201ENST00000279839 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
CWC15-201ENST00000279839 MSH5O43196 834 aa18.79■□□□□ 0.6
CWC15-201ENST00000279839 PIAS4Q8N2W9 510 aaPredicted RBP18.66■□□□□ 0.58
CWC15-201ENST00000279839 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
CWC15-201ENST00000279839 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
CWC15-201ENST00000279839 NISCHQ9Y2I1 1504 aa18.56■□□□□ 0.56
CWC15-201ENST00000279839 ADRA2BP18089 450 aa18.54■□□□□ 0.56
CWC15-201ENST00000279839 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
CWC15-201ENST00000279839 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.31
CWC15-201ENST00000279839 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
CWC15-201ENST00000279839 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
CWC15-201ENST00000279839 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
CWC15-201ENST00000279839 ABCC9O60706 1549 aa16.48■□□□□ 0.23
CWC15-201ENST00000279839 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
CWC15-201ENST00000279839 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
CWC15-201ENST00000279839 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
CWC15-201ENST00000279839 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
CWC15-201ENST00000279839 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
CWC15-201ENST00000279839 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
CWC15-201ENST00000279839 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
CWC15-201ENST00000279839 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
CWC15-201ENST00000279839 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
CWC15-201ENST00000279839 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
CWC15-201ENST00000279839 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
CWC15-201ENST00000279839 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
CWC15-201ENST00000279839 NACADO15069 1562 aa15.56■□□□□ 0.08
CWC15-201ENST00000279839 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
CWC15-201ENST00000279839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.071e-7■■■□□ 14.6
CWC15-201ENST00000279839 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
CWC15-201ENST00000279839 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
CWC15-201ENST00000279839 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.04
CWC15-201ENST00000279839 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
CWC15-201ENST00000279839 SCRIBQ14160 1630 aa15.27■□□□□ 0.03
CWC15-201ENST00000279839 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
CWC15-201ENST00000279839 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
CWC15-201ENST00000279839 KCNA4P22459 653 aa15.19■□□□□ 0.02
CWC15-201ENST00000279839 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
CWC15-201ENST00000279839 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
CWC15-201ENST00000279839 CAPN15O75808 1086 aa14.97□□□□□ -0.01
CWC15-201ENST00000279839 DSG3P32926 999 aa14.97□□□□□ -0.01
CWC15-201ENST00000279839 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
CWC15-201ENST00000279839 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
CWC15-201ENST00000279839 EIF4G1Q04637 1599 aaKnown RBP14.88□□□□□ -0.03
CWC15-201ENST00000279839 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
CWC15-201ENST00000279839 APLP2Q06481 763 aa14.73□□□□□ -0.05
CWC15-201ENST00000279839 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
CWC15-201ENST00000279839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
CWC15-201ENST00000279839 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
CWC15-201ENST00000279839 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
CWC15-201ENST00000279839 ABCB7O75027 752 aa14.63□□□□□ -0.07
CWC15-201ENST00000279839 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
CWC15-201ENST00000279839 POTEHQ6S545 545 aa14.55□□□□□ -0.08
CWC15-201ENST00000279839 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
CWC15-201ENST00000279839 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
CWC15-201ENST00000279839 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
CWC15-201ENST00000279839 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
CWC15-201ENST00000279839 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
CWC15-201ENST00000279839 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
CWC15-201ENST00000279839 SMARCA2P51531 1590 aa14.33□□□□□ -0.12
CWC15-201ENST00000279839 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
CWC15-201ENST00000279839 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
CWC15-201ENST00000279839 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
CWC15-201ENST00000279839 POLA2Q14181 598 aa14.28□□□□□ -0.12
CWC15-201ENST00000279839 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
CWC15-201ENST00000279839 WIZO95785 1651 aa14.28□□□□□ -0.12
CWC15-201ENST00000279839 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
CWC15-201ENST00000279839 NESP48681 1621 aa14.25□□□□□ -0.13
CWC15-201ENST00000279839 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
CWC15-201ENST00000279839 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
CWC15-201ENST00000279839 ERCC6Q03468 1493 aa14.14□□□□□ -0.15
CWC15-201ENST00000279839 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
CWC15-201ENST00000279839 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.16
CWC15-201ENST00000279839 THOC2Q8NI27 1593 aaKnown RBP14.06□□□□□ -0.16
CWC15-201ENST00000279839 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
CWC15-201ENST00000279839 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.17
CWC15-201ENST00000279839 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
CWC15-201ENST00000279839 ZBTB22O15209 634 aa13.99□□□□□ -0.17
CWC15-201ENST00000279839 CUX2O14529 1486 aa13.99□□□□□ -0.17
CWC15-201ENST00000279839 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
CWC15-201ENST00000279839 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
CWC15-201ENST00000279839 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
CWC15-201ENST00000279839 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
CWC15-201ENST00000279839 PRDM2Q13029 1718 aa13.86□□□□□ -0.19
CWC15-201ENST00000279839 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
CWC15-201ENST00000279839 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
CWC15-201ENST00000279839 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
CWC15-201ENST00000279839 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
CWC15-201ENST00000279839 CFTRP13569 1480 aa13.83□□□□□ -0.19
CWC15-201ENST00000279839 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.19
CWC15-201ENST00000279839 WDR62O43379 1518 aa13.83□□□□□ -0.19
CWC15-201ENST00000279839 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
CWC15-201ENST00000279839 REM2Q8IYK8 340 aaPredicted RBP13.79□□□□□ -0.2
CWC15-201ENST00000279839 URB2Q14146 1524 aaKnown RBP13.78□□□□□ -0.2
CWC15-201ENST00000279839 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
CWC15-201ENST00000279839 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms