Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 AC022517.1-201ENST00000592429 346 ntBASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 AL591742.1-201ENST00000604433 565 ntBASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 AC011767.1-201ENST00000617410 1153 ntBASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DRB4X5D2U9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 AL162412.1-201ENST00000567129 965 ntBASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DRB4X5D2U9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 LINC01006-201ENST00000333319 2292 ntBASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 AC027702.1-201ENST00000563810 1770 ntBASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms