RNA–Protein interactions for RNA: ENST00000559729.5

SEC11A-208, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11A, Length 1,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-208ENST00000559729 NISCHQ9Y2I1 1504 aa52.42■■■■■ 5.98
SEC11A-208ENST00000559729 CCDC180Q9P1Z9 1646 aa46.85■■■■■ 5.09
SEC11A-208ENST00000559729 ABCC9O60706 1549 aa46.6■■■■■ 5.05
SEC11A-208ENST00000559729 RB1CC1Q8TDY2 1594 aa44.43■■■■■ 4.7
SEC11A-208ENST00000559729 NACADO15069 1562 aa44.2■■■■■ 4.67
SEC11A-208ENST00000559729 DCAF8L2P0C7V8 631 aa44.16■■■■■ 4.66
SEC11A-208ENST00000559729 MYO15BQ96JP2 1530 aa43.68■■■■■ 4.58
SEC11A-208ENST00000559729 ZCCHC6Q5VYS8 1495 aaKnown RBP43.53■■■■■ 4.56
SEC11A-208ENST00000559729 UNC13AQ9UPW8 1703 aa43.48■■■■■ 4.55
SEC11A-208ENST00000559729 PABPN1Q86U42 306 aaKnown RBP eCLIP43.47■■■■■ 4.55
SEC11A-208ENST00000559729 DNAJC5BQ9UF47 199 aa43.41■■■■■ 4.54
SEC11A-208ENST00000559729 DCAF1Q9Y4B6 1507 aa43.27■■■■■ 4.52
SEC11A-208ENST00000559729 BICRAQ9NZM4 1560 aa43.18■■■■■ 4.5
SEC11A-208ENST00000559729 SCRIBQ14160 1630 aa42.81■■■■■ 4.44
SEC11A-208ENST00000559729 SHROOM4Q9ULL8 1493 aa42.52■■■■■ 4.4
SEC11A-208ENST00000559729 CC2D2AQ9P2K1 1620 aa42.09■■■■■ 4.33
SEC11A-208ENST00000559729 EIF4G1Q04637 1599 aaKnown RBP42.08■■■■■ 4.33
SEC11A-208ENST00000559729 CECR2Q9BXF3 1484 aa41.91■■■■■ 4.3
SEC11A-208ENST00000559729 SMARCA4P51532 1647 aa40.83■■■■■ 4.13
SEC11A-208ENST00000559729 NCAPD3P42695 1498 aa40.82■■■■■ 4.12
SEC11A-208ENST00000559729 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
SEC11A-208ENST00000559729 BAZ1AQ9NRL2 1556 aaPredicted RBP40.65■■■■■ 4.1
SEC11A-208ENST00000559729 SMARCA2P51531 1590 aa40.64■■■■■ 4.1
SEC11A-208ENST00000559729 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
SEC11A-208ENST00000559729 MROH2BQ7Z745 1585 aa40.44■■■■■ 4.06
SEC11A-208ENST00000559729 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
SEC11A-208ENST00000559729 PEG3Q9GZU2 1588 aa40.39■■■■■ 4.06
SEC11A-208ENST00000559729 ERCC6Q03468 1493 aa40.18■■■■■ 4.02
SEC11A-208ENST00000559729 NESP48681 1621 aa40.15■■■■■ 4.02
SEC11A-208ENST00000559729 WIZO95785 1651 aa39.98■■■■□ 3.99
SEC11A-208ENST00000559729 CUX2O14529 1486 aa39.94■■■■□ 3.98
SEC11A-208ENST00000559729 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
SEC11A-208ENST00000559729 RSF1Q96T23 1441 aaPredicted RBP39.72■■■■□ 3.95
SEC11A-208ENST00000559729 THOC2Q8NI27 1593 aaKnown RBP39.63■■■■□ 3.94
SEC11A-208ENST00000559729 KIF21AQ7Z4S6 1674 aa39.62■■■■□ 3.93
SEC11A-208ENST00000559729 CADPSQ9ULU8 1353 aa39.61■■■■□ 3.93
SEC11A-208ENST00000559729 PDS5BQ9NTI5 1447 aa39.6■■■■□ 3.93
SEC11A-208ENST00000559729 DNAJC5Q9H3Z4 198 aa39.52■■■■□ 3.92
SEC11A-208ENST00000559729 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
SEC11A-208ENST00000559729 MRC2Q9UBG0 1479 aa39.26■■■■□ 3.88
SEC11A-208ENST00000559729 CFTRP13569 1480 aa39.24■■■■□ 3.87
SEC11A-208ENST00000559729 FANCD2Q9BXW9 1451 aa39.18■■■■□ 3.86
SEC11A-208ENST00000559729 CEP164Q9UPV0 1460 aa39.17■■■■□ 3.86
SEC11A-208ENST00000559729 WDR62O43379 1518 aa39.16■■■■□ 3.86
SEC11A-208ENST00000559729 CCDC88BA6NC98 1476 aa39.04■■■■□ 3.84
SEC11A-208ENST00000559729 PRDM2Q13029 1718 aa38.86■■■■□ 3.81
SEC11A-208ENST00000559729 URB2Q14146 1524 aaKnown RBP38.85■■■■□ 3.81
SEC11A-208ENST00000559729 TOPBP1Q92547 1522 aa38.48■■■■□ 3.75
SEC11A-208ENST00000559729 IFT140Q96RY7 1462 aa38.37■■■■□ 3.73
SEC11A-208ENST00000559729 DNMBPQ6XZF7 1577 aa38.36■■■■□ 3.73
SEC11A-208ENST00000559729 ABCC8Q09428 1581 aa38.35■■■■□ 3.73
SEC11A-208ENST00000559729 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
SEC11A-208ENST00000559729 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
SEC11A-208ENST00000559729 OSCARQ8IYS5 282 aa38.18■■■■□ 3.7
SEC11A-208ENST00000559729 EIF4G3O43432 1585 aaKnown RBP38.12■■■■□ 3.69
SEC11A-208ENST00000559729 POLA1P09884 1462 aaPredicted RBP38.12■■■■□ 3.69
SEC11A-208ENST00000559729 TARBP1Q13395 1621 aaKnown RBP38.12■■■■□ 3.69
SEC11A-208ENST00000559729 AQRO60306 1485 aaKnown RBP eCLIP38.03■■■■□ 3.68
SEC11A-208ENST00000559729 TRIM41Q8WV44 630 aa38.03■■■■□ 3.68
SEC11A-208ENST00000559729 RAD54L2Q9Y4B4 1467 aa38.01■■■■□ 3.67
SEC11A-208ENST00000559729 CUX1P39880 1505 aa37.97■■■■□ 3.67
SEC11A-208ENST00000559729 FGD5Q6ZNL6 1462 aa37.94■■■■□ 3.66
SEC11A-208ENST00000559729 SOGA1O94964 1423 aa37.94■■■■□ 3.66
SEC11A-208ENST00000559729 TDRD9Q8NDG6 1382 aaKnown RBP37.85■■■■□ 3.65
SEC11A-208ENST00000559729 CHD1O14646 1710 aa37.78■■■■□ 3.64
SEC11A-208ENST00000559729 FBLN2P98095 1184 aa37.71■■■■□ 3.63
SEC11A-208ENST00000559729 RIMBP3CA6NJZ7 1639 aa37.69■■■■□ 3.62
SEC11A-208ENST00000559729 RIMBP3BA6NNM3 1639 aa37.69■■■■□ 3.62
SEC11A-208ENST00000559729 RIMBP3Q9UFD9 1639 aa37.69■■■■□ 3.62
SEC11A-208ENST00000559729 WDR97A6NE52 1622 aa37.68■■■■□ 3.62
SEC11A-208ENST00000559729 SNAPC4Q5SXM2 1469 aa37.64■■■■□ 3.62
SEC11A-208ENST00000559729 ARHGEF11O15085 1522 aa37.61■■■■□ 3.61
SEC11A-208ENST00000559729 GRIN2BQ13224 1484 aa37.55■■■■□ 3.6
SEC11A-208ENST00000559729 MAGI1Q96QZ7 1491 aaPredicted RBP37.5■■■■□ 3.59
SEC11A-208ENST00000559729 GAPVD1Q14C86 1478 aa37.49■■■■□ 3.59
SEC11A-208ENST00000559729 ABCA10Q8WWZ4 1543 aa37.49■■■■□ 3.59
SEC11A-208ENST00000559729 PBRM1Q86U86 1689 aa37.46■■■■□ 3.59
SEC11A-208ENST00000559729 CHMP7Q8WUX9 453 aaPredicted RBP37.45■■■■□ 3.59
SEC11A-208ENST00000559729 WRNQ14191 1432 aaPredicted RBP eCLIP37.44■■■■□ 3.58
SEC11A-208ENST00000559729 SYNJ1O43426 1573 aa37.44■■■■□ 3.58
SEC11A-208ENST00000559729 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
SEC11A-208ENST00000559729 ABCA5Q8WWZ7 1642 aa37.43■■■■□ 3.58
SEC11A-208ENST00000559729 BIVM-ERCC5R4GMW8 1640 aa37.43■■■■□ 3.58
SEC11A-208ENST00000559729 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
SEC11A-208ENST00000559729 CLASP1Q7Z460 1538 aa37.33■■■■□ 3.57
SEC11A-208ENST00000559729 CYB5RLQ6IPT4 315 aa37.32■■■■□ 3.56
SEC11A-208ENST00000559729 ARAP1Q96P48 1450 aa37.27■■■■□ 3.56
SEC11A-208ENST00000559729 ADAMTS12P58397 1594 aa37.12■■■■□ 3.53
SEC11A-208ENST00000559729 GRIN2AQ12879 1464 aa37.09■■■■□ 3.53
SEC11A-208ENST00000559729 ERICH3Q5RHP9 1530 aa37.01■■■■□ 3.52
SEC11A-208ENST00000559729 FHAD1B1AJZ9 1412 aa37.01■■■■□ 3.51
SEC11A-208ENST00000559729 CEP170Q5SW79 1584 aa36.96■■■■□ 3.51
SEC11A-208ENST00000559729 NUP160Q12769 1436 aa36.93■■■■□ 3.5
SEC11A-208ENST00000559729 ERCC6L2Q5T890 1561 aa36.84■■■■□ 3.49
SEC11A-208ENST00000559729 TRHP20396 242 aaPredicted RBP36.79■■■■□ 3.48
SEC11A-208ENST00000559729 SHROOM2Q13796 1616 aa36.74■■■■□ 3.47
SEC11A-208ENST00000559729 KIF27Q86VH2 1401 aa36.69■■■■□ 3.46
SEC11A-208ENST00000559729 IGF1RP08069 1367 aa36.66■■■■□ 3.46
SEC11A-208ENST00000559729 RUSC2Q8N2Y8 1516 aa36.6■■■■□ 3.45
SEC11A-208ENST00000559729 PRG4Q92954 1404 aaPredicted RBP36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms