RNA–Protein interactions for RNA: ENST00000251287.2

HCN2-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN2, Length 3,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN2-201ENST00000251287 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
HCN2-201ENST00000251287 HRCP23327 699 aa32.88■■■□□ 2.85
HCN2-201ENST00000251287 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
HCN2-201ENST00000251287 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
HCN2-201ENST00000251287 SUPT5HO00267 1087 aaKnown RBP32.62■■■□□ 2.81
HCN2-201ENST00000251287 PCGF6Q9BYE7 350 aa32.58■■■□□ 2.81
HCN2-201ENST00000251287 MYO15BQ96JP2 1530 aa31.83■■■□□ 2.69
HCN2-201ENST00000251287 PELP1Q8IZL8 1130 aaKnown RBP31.75■■■□□ 2.67
HCN2-201ENST00000251287 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
HCN2-201ENST00000251287 SCAF1Q9H7N4 1312 aaKnown RBP31.41■■■□□ 2.62
HCN2-201ENST00000251287 LOC105371045A0A1W2PR82 267 aa31.34■■■□□ 2.61
HCN2-201ENST00000251287 TRIM26Q12899 539 aaPredicted RBP31.01■■■□□ 2.55
HCN2-201ENST00000251287 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
HCN2-201ENST00000251287 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
HCN2-201ENST00000251287 EHMT2Q96KQ7 1210 aa30.64■■■□□ 2.5
HCN2-201ENST00000251287 ZEB1P37275 1124 aaPredicted RBP30.64■■■□□ 2.5
HCN2-201ENST00000251287 NEUROD1Q13562 356 aa30.55■■■□□ 2.48
HCN2-201ENST00000251287 GTF3C3Q9Y5Q9 886 aa30.48■■■□□ 2.47
HCN2-201ENST00000251287 ACIN1Q9UKV3 1341 aaKnown RBP30.46■■■□□ 2.47
HCN2-201ENST00000251287 MYT1Q01538 1121 aa30.42■■■□□ 2.46
HCN2-201ENST00000251287 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
HCN2-201ENST00000251287 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
HCN2-201ENST00000251287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.13■■■□□ 2.41
HCN2-201ENST00000251287 CENPBP07199 599 aaPredicted RBP30.1■■■□□ 2.41
HCN2-201ENST00000251287 YTHDC1Q96MU7 727 aaKnown RBP30.03■■■□□ 2.4
HCN2-201ENST00000251287 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
HCN2-201ENST00000251287 CCER1Q8TC90 406 aaPredicted RBP30.02■■■□□ 2.4
HCN2-201ENST00000251287 DIEXFQ68CQ4 756 aaKnown RBP29.98■■■□□ 2.39
HCN2-201ENST00000251287 TTBK1Q5TCY1 1321 aaPredicted RBP29.88■■■□□ 2.37
HCN2-201ENST00000251287 TRIM41Q8WV44 630 aa29.83■■■□□ 2.37
HCN2-201ENST00000251287 MIER1Q8N108 512 aa29.23■■■□□ 2.27
HCN2-201ENST00000251287 ZNF316A6NFI3 1004 aaPredicted RBP29.19■■■□□ 2.26
HCN2-201ENST00000251287 BCL11AQ9H165 835 aa29.03■■■□□ 2.24
HCN2-201ENST00000251287 HNRNPUL2Q1KMD3 747 aaKnown RBP28.79■■■□□ 2.2
HCN2-201ENST00000251287 ANP32EQ9BTT0 268 aa28.79■■■□□ 2.2
HCN2-201ENST00000251287 SUPT16HQ9Y5B9 1047 aaKnown RBP28.76■■■□□ 2.2
HCN2-201ENST00000251287 RB1CC1Q8TDY2 1594 aa28.76■■■□□ 2.19
HCN2-201ENST00000251287 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
HCN2-201ENST00000251287 CSRNP3Q8WYN3 585 aa28.71■■■□□ 2.19
HCN2-201ENST00000251287 BCANQ96GW7 911 aa28.69■■■□□ 2.18
HCN2-201ENST00000251287 TSHZ2Q9NRE2 1034 aa28.69■■■□□ 2.18
HCN2-201ENST00000251287 ABCC9O60706 1549 aa28.55■■■□□ 2.16
HCN2-201ENST00000251287 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
HCN2-201ENST00000251287 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
HCN2-201ENST00000251287 RANGAP1P46060 587 aaPredicted RBP28.31■■■□□ 2.12
HCN2-201ENST00000251287 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
HCN2-201ENST00000251287 KCNH8Q96L42 1107 aa28.21■■■□□ 2.11
HCN2-201ENST00000251287 FKBP8Q14318 412 aa28.19■■■□□ 2.1
HCN2-201ENST00000251287 ITGAEP38570 1179 aa28.16■■■□□ 2.1
HCN2-201ENST00000251287 CLSPNQ9HAW4 1339 aa28.12■■■□□ 2.09
HCN2-201ENST00000251287 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
HCN2-201ENST00000251287 RBM19Q9Y4C8 960 aaKnown RBP28.04■■■□□ 2.08
HCN2-201ENST00000251287 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
HCN2-201ENST00000251287 APLP2Q06481 763 aa27.99■■■□□ 2.07
HCN2-201ENST00000251287 SOGA1O94964 1423 aa27.99■■■□□ 2.07
HCN2-201ENST00000251287 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
HCN2-201ENST00000251287 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
HCN2-201ENST00000251287 NEFLP07196 543 aa27.89■■■□□ 2.06
HCN2-201ENST00000251287 ERICH6Q7L0X2 663 aa27.88■■■□□ 2.05
HCN2-201ENST00000251287 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
HCN2-201ENST00000251287 PRKCSHP14314 528 aaPredicted RBP27.88■■■□□ 2.05
HCN2-201ENST00000251287 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
HCN2-201ENST00000251287 TRIM52Q96A61 297 aa27.83■■■□□ 2.05
HCN2-201ENST00000251287 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
HCN2-201ENST00000251287 MSH5O43196 834 aa27.8■■■□□ 2.04
HCN2-201ENST00000251287 WIZO95785 1651 aa27.79■■■□□ 2.04
HCN2-201ENST00000251287 DDX10Q13206 875 aaKnown RBP27.72■■■□□ 2.03
HCN2-201ENST00000251287 IRX6P78412 446 aaPredicted RBP27.68■■■□□ 2.02
HCN2-201ENST00000251287 HIRIP3Q9BW71 556 aaPredicted RBP27.65■■■□□ 2.02
HCN2-201ENST00000251287 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
HCN2-201ENST00000251287 CLIP1P30622 1438 aa27.54■■■□□ 2
HCN2-201ENST00000251287 GOLGA3Q08378 1498 aa27.53■■■□□ 2
HCN2-201ENST00000251287 DEKP35659 375 aaKnown RBP27.45■■□□□ 1.98
HCN2-201ENST00000251287 NBR1Q14596 966 aa27.44■■□□□ 1.98
HCN2-201ENST00000251287 CDK11AQ9UQ88 783 aaPredicted RBP27.41■■□□□ 1.98
HCN2-201ENST00000251287 ANO8Q9HCE9 1232 aaPredicted RBP27.39■■□□□ 1.97
HCN2-201ENST00000251287 VPS8Q8N3P4 1428 aa27.35■■□□□ 1.97
HCN2-201ENST00000251287 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
HCN2-201ENST00000251287 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
HCN2-201ENST00000251287 EEA1Q15075 1411 aa27.27■■□□□ 1.96
HCN2-201ENST00000251287 ANP32CO43423 234 aa27.27■■□□□ 1.96
HCN2-201ENST00000251287 SIN3AQ96ST3 1273 aa27.27■■□□□ 1.96
HCN2-201ENST00000251287 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
HCN2-201ENST00000251287 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
HCN2-201ENST00000251287 FANCIQ9NVI1 1328 aa27.21■■□□□ 1.95
HCN2-201ENST00000251287 CCDC136Q96JN2 1154 aa27.2■■□□□ 1.95
HCN2-201ENST00000251287 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
HCN2-201ENST00000251287 RTN4Q9NQC3 1192 aaKnown RBP27.18■■□□□ 1.94
HCN2-201ENST00000251287 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
HCN2-201ENST00000251287 SALL2Q9Y467 1007 aaPredicted RBP27.12■■□□□ 1.93
HCN2-201ENST00000251287 RAPGEF2Q9Y4G8 1499 aa27.11■■□□□ 1.93
HCN2-201ENST00000251287 B4GALNT3Q6L9W6 998 aa27.08■■□□□ 1.93
HCN2-201ENST00000251287 NACADO15069 1562 aa27.06■■□□□ 1.92
HCN2-201ENST00000251287 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
HCN2-201ENST00000251287 PAK3O75914 559 aaPredicted RBP27.03■■□□□ 1.92
HCN2-201ENST00000251287 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.01■■□□□ 1.91
HCN2-201ENST00000251287 KIF21BO75037 1637 aa27■■□□□ 1.91
HCN2-201ENST00000251287 RAB3GAP2Q9H2M9 1393 aa26.99■■□□□ 1.91
HCN2-201ENST00000251287 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
HCN2-201ENST00000251287 NOP58Q9Y2X3 529 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms