RNA–Protein interactions for RNA: ENST00000398234.7

PDE9A-212, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-212ENST00000398234 NISCHQ9Y2I1 1504 aa48.86■■■■■ 5.41
PDE9A-212ENST00000398234 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
PDE9A-212ENST00000398234 ABCC9O60706 1549 aa41.89■■■■■ 4.3
PDE9A-212ENST00000398234 DCAF8L2P0C7V8 631 aa41.02■■■■■ 4.16
PDE9A-212ENST00000398234 ZCCHC6Q5VYS8 1495 aaKnown RBP40.76■■■■■ 4.12
PDE9A-212ENST00000398234 NACADO15069 1562 aa40.44■■■■■ 4.06
PDE9A-212ENST00000398234 RB1CC1Q8TDY2 1594 aa40.38■■■■■ 4.05
PDE9A-212ENST00000398234 DCAF1Q9Y4B6 1507 aa40.33■■■■■ 4.05
PDE9A-212ENST00000398234 MYO15BQ96JP2 1530 aa40.28■■■■■ 4.04
PDE9A-212ENST00000398234 SCRIBQ14160 1630 aa39.51■■■■□ 3.92
PDE9A-212ENST00000398234 UNC13AQ9UPW8 1703 aa39.39■■■■□ 3.9
PDE9A-212ENST00000398234 PABPN1Q86U42 306 aaKnown RBP eCLIP39.37■■■■□ 3.89
PDE9A-212ENST00000398234 SHROOM4Q9ULL8 1493 aa39.2■■■■□ 3.87
PDE9A-212ENST00000398234 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
PDE9A-212ENST00000398234 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
PDE9A-212ENST00000398234 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
PDE9A-212ENST00000398234 DNAJC5BQ9UF47 199 aa38.04■■■■□ 3.68
PDE9A-212ENST00000398234 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
PDE9A-212ENST00000398234 CC2D2AQ9P2K1 1620 aa37.81■■■■□ 3.64
PDE9A-212ENST00000398234 SMARCA4P51532 1647 aa37.76■■■■□ 3.64
PDE9A-212ENST00000398234 MROH2BQ7Z745 1585 aa37.71■■■■□ 3.63
PDE9A-212ENST00000398234 RSF1Q96T23 1441 aaPredicted RBP37.5■■■■□ 3.59
PDE9A-212ENST00000398234 ATAD2BQ9ULI0 1458 aa37.48■■■■□ 3.59
PDE9A-212ENST00000398234 SMARCA2P51531 1590 aa37.41■■■■□ 3.58
PDE9A-212ENST00000398234 NCAPD3P42695 1498 aa37.35■■■■□ 3.57
PDE9A-212ENST00000398234 WIZO95785 1651 aa37.32■■■■□ 3.57
PDE9A-212ENST00000398234 PEG3Q9GZU2 1588 aa37.3■■■■□ 3.56
PDE9A-212ENST00000398234 BAZ1BQ9UIG0 1483 aaKnown RBP37.23■■■■□ 3.55
PDE9A-212ENST00000398234 SUPT5HO00267 1087 aaKnown RBP37.22■■■■□ 3.55
PDE9A-212ENST00000398234 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
PDE9A-212ENST00000398234 TOP2AP11388 1531 aaKnown RBP36.89■■■■□ 3.5
PDE9A-212ENST00000398234 CCDC88BA6NC98 1476 aa36.57■■■■□ 3.44
PDE9A-212ENST00000398234 NESP48681 1621 aa36.39■■■■□ 3.42
PDE9A-212ENST00000398234 CADPSQ9ULU8 1353 aa36.37■■■■□ 3.41
PDE9A-212ENST00000398234 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
PDE9A-212ENST00000398234 CFTRP13569 1480 aa36.21■■■■□ 3.39
PDE9A-212ENST00000398234 PDS5BQ9NTI5 1447 aa36.09■■■■□ 3.37
PDE9A-212ENST00000398234 ERCC6Q03468 1493 aa36.07■■■■□ 3.36
PDE9A-212ENST00000398234 FANCD2Q9BXW9 1451 aa35.94■■■■□ 3.34
PDE9A-212ENST00000398234 KIF21AQ7Z4S6 1674 aa35.85■■■■□ 3.33
PDE9A-212ENST00000398234 CEP164Q9UPV0 1460 aa35.82■■■■□ 3.32
PDE9A-212ENST00000398234 PRDM2Q13029 1718 aa35.8■■■■□ 3.32
PDE9A-212ENST00000398234 MRC2Q9UBG0 1479 aa35.63■■■■□ 3.29
PDE9A-212ENST00000398234 THOC2Q8NI27 1593 aaKnown RBP35.55■■■■□ 3.28
PDE9A-212ENST00000398234 URB2Q14146 1524 aaKnown RBP35.52■■■■□ 3.28
PDE9A-212ENST00000398234 WDR62O43379 1518 aa35.43■■■■□ 3.26
PDE9A-212ENST00000398234 ABCC8Q09428 1581 aa35.4■■■■□ 3.26
PDE9A-212ENST00000398234 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
PDE9A-212ENST00000398234 DNMBPQ6XZF7 1577 aa35.35■■■■□ 3.25
PDE9A-212ENST00000398234 WRNQ14191 1432 aaPredicted RBP eCLIP35.35■■■■□ 3.25
PDE9A-212ENST00000398234 CUX2O14529 1486 aa35.34■■■■□ 3.25
PDE9A-212ENST00000398234 CUX1P39880 1505 aa35.32■■■■□ 3.25
PDE9A-212ENST00000398234 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
PDE9A-212ENST00000398234 FGD5Q6ZNL6 1462 aa35.14■■■■□ 3.22
PDE9A-212ENST00000398234 POLA1P09884 1462 aaPredicted RBP35.14■■■■□ 3.22
PDE9A-212ENST00000398234 TOP2BQ02880 1626 aa35.11■■■■□ 3.21
PDE9A-212ENST00000398234 SOGA1O94964 1423 aa35.09■■■■□ 3.21
PDE9A-212ENST00000398234 TRIM41Q8WV44 630 aa35.07■■■■□ 3.2
PDE9A-212ENST00000398234 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
PDE9A-212ENST00000398234 BIVM-ERCC5R4GMW8 1640 aa35.06■■■■□ 3.2
PDE9A-212ENST00000398234 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
PDE9A-212ENST00000398234 CHIC1Q5VXU3 224 aa34.95■■■■□ 3.18
PDE9A-212ENST00000398234 TARBP1Q13395 1621 aaKnown RBP34.9■■■■□ 3.18
PDE9A-212ENST00000398234 ZNF608Q9ULD9 1512 aaPredicted RBP34.89■■■■□ 3.18
PDE9A-212ENST00000398234 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
PDE9A-212ENST00000398234 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.16
PDE9A-212ENST00000398234 ABCA10Q8WWZ4 1543 aa34.78■■■■□ 3.16
PDE9A-212ENST00000398234 EIF4G3O43432 1585 aaKnown RBP34.67■■■■□ 3.14
PDE9A-212ENST00000398234 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
PDE9A-212ENST00000398234 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
PDE9A-212ENST00000398234 KIF27Q86VH2 1401 aa34.58■■■■□ 3.13
PDE9A-212ENST00000398234 ABCA5Q8WWZ7 1642 aa34.54■■■■□ 3.12
PDE9A-212ENST00000398234 GRIN2BQ13224 1484 aa34.54■■■■□ 3.12
PDE9A-212ENST00000398234 RUSC2Q8N2Y8 1516 aa34.48■■■■□ 3.11
PDE9A-212ENST00000398234 FBLN2P98095 1184 aa34.46■■■■□ 3.11
PDE9A-212ENST00000398234 SNAPC4Q5SXM2 1469 aa34.43■■■■□ 3.1
PDE9A-212ENST00000398234 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
PDE9A-212ENST00000398234 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
PDE9A-212ENST00000398234 IGF1RP08069 1367 aa34.4■■■■□ 3.1
PDE9A-212ENST00000398234 CHMP7Q8WUX9 453 aaPredicted RBP34.36■■■■□ 3.09
PDE9A-212ENST00000398234 ERICH3Q5RHP9 1530 aa34.36■■■■□ 3.09
PDE9A-212ENST00000398234 MAGI1Q96QZ7 1491 aaPredicted RBP34.34■■■■□ 3.09
PDE9A-212ENST00000398234 CSRNP3Q8WYN3 585 aa34.26■■■■□ 3.07
PDE9A-212ENST00000398234 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
PDE9A-212ENST00000398234 SYNJ2O15056 1496 aa34.23■■■■□ 3.07
PDE9A-212ENST00000398234 CARMIL1Q5VZK9 1371 aa34.22■■■■□ 3.07
PDE9A-212ENST00000398234 EEA1Q15075 1411 aa34.2■■■■□ 3.07
PDE9A-212ENST00000398234 OSCARQ8IYS5 282 aa34.19■■■■□ 3.06
PDE9A-212ENST00000398234 ADAMTS12P58397 1594 aa34.18■■■■□ 3.06
PDE9A-212ENST00000398234 CHD1O14646 1710 aa34.12■■■■□ 3.05
PDE9A-212ENST00000398234 CUL7Q14999 1698 aa34.11■■■■□ 3.05
PDE9A-212ENST00000398234 GRIN2AQ12879 1464 aa34.08■■■■□ 3.05
PDE9A-212ENST00000398234 EHMT2Q96KQ7 1210 aa34.03■■■■□ 3.04
PDE9A-212ENST00000398234 RAPGEF2Q9Y4G8 1499 aa34.02■■■■□ 3.04
PDE9A-212ENST00000398234 PRXQ9BXM0 1461 aa33.99■■■■□ 3.03
PDE9A-212ENST00000398234 NUP160Q12769 1436 aa33.87■■■■□ 3.01
PDE9A-212ENST00000398234 CEP170Q5SW79 1584 aa33.87■■■■□ 3.01
PDE9A-212ENST00000398234 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
PDE9A-212ENST00000398234 UBTFP17480 764 aaKnown RBP33.79■■■■□ 3
PDE9A-212ENST00000398234 KIF21BO75037 1637 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms