RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 NISCHQ9Y2I1 1504 aa46.49■■■■■ 5.03
CNTNAP3B-212ENST00000617422 CCDC180Q9P1Z9 1646 aa40.36■■■■■ 4.05
CNTNAP3B-212ENST00000617422 ZCCHC6Q5VYS8 1495 aaKnown RBP39.08■■■■□ 3.85
CNTNAP3B-212ENST00000617422 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
CNTNAP3B-212ENST00000617422 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
CNTNAP3B-212ENST00000617422 ABCC9O60706 1549 aa38.21■■■■□ 3.71
CNTNAP3B-212ENST00000617422 SHROOM4Q9ULL8 1493 aa38.2■■■■□ 3.71
CNTNAP3B-212ENST00000617422 MYO15BQ96JP2 1530 aa37.79■■■■□ 3.64
CNTNAP3B-212ENST00000617422 NACADO15069 1562 aa37.56■■■■□ 3.6
CNTNAP3B-212ENST00000617422 SCRIBQ14160 1630 aa37.31■■■■□ 3.56
CNTNAP3B-212ENST00000617422 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
CNTNAP3B-212ENST00000617422 SUPT5HO00267 1087 aaKnown RBP36.77■■■■□ 3.48
CNTNAP3B-212ENST00000617422 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
CNTNAP3B-212ENST00000617422 BICRAQ9NZM4 1560 aa36.25■■■■□ 3.39
CNTNAP3B-212ENST00000617422 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
CNTNAP3B-212ENST00000617422 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
CNTNAP3B-212ENST00000617422 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
CNTNAP3B-212ENST00000617422 MROH2BQ7Z745 1585 aa36■■■■□ 3.35
CNTNAP3B-212ENST00000617422 BAZ1AQ9NRL2 1556 aaPredicted RBP35.82■■■■□ 3.33
CNTNAP3B-212ENST00000617422 WIZO95785 1651 aa35.73■■■■□ 3.31
CNTNAP3B-212ENST00000617422 SMARCA4P51532 1647 aa35.71■■■■□ 3.31
CNTNAP3B-212ENST00000617422 CHIC1Q5VXU3 224 aa35.26■■■■□ 3.24
CNTNAP3B-212ENST00000617422 TOP2AP11388 1531 aaKnown RBP35.24■■■■□ 3.23
CNTNAP3B-212ENST00000617422 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
CNTNAP3B-212ENST00000617422 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
CNTNAP3B-212ENST00000617422 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
CNTNAP3B-212ENST00000617422 SMARCA2P51531 1590 aa34.99■■■■□ 3.19
CNTNAP3B-212ENST00000617422 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
CNTNAP3B-212ENST00000617422 BAZ1BQ9UIG0 1483 aaKnown RBP34.87■■■■□ 3.17
CNTNAP3B-212ENST00000617422 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
CNTNAP3B-212ENST00000617422 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
CNTNAP3B-212ENST00000617422 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
CNTNAP3B-212ENST00000617422 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
CNTNAP3B-212ENST00000617422 ABCC8Q09428 1581 aa34.35■■■■□ 3.09
CNTNAP3B-212ENST00000617422 LOC105371045A0A1W2PR82 267 aa34.02■■■■□ 3.04
CNTNAP3B-212ENST00000617422 CFTRP13569 1480 aa34.01■■■■□ 3.04
CNTNAP3B-212ENST00000617422 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
CNTNAP3B-212ENST00000617422 FAM9AQ8IZU1 332 aaPredicted RBP33.97■■■■□ 3.03
CNTNAP3B-212ENST00000617422 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
CNTNAP3B-212ENST00000617422 DNAJC5BQ9UF47 199 aa33.88■■■■□ 3.01
CNTNAP3B-212ENST00000617422 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
CNTNAP3B-212ENST00000617422 PRDM2Q13029 1718 aa33.81■■■■□ 3
CNTNAP3B-212ENST00000617422 SOGA1O94964 1423 aa33.73■■■□□ 2.99
CNTNAP3B-212ENST00000617422 TOP2BQ02880 1626 aa33.7■■■□□ 2.98
CNTNAP3B-212ENST00000617422 NESP48681 1621 aa33.65■■■□□ 2.98
CNTNAP3B-212ENST00000617422 BIVM-ERCC5R4GMW8 1640 aa33.65■■■□□ 2.98
CNTNAP3B-212ENST00000617422 RUSC2Q8N2Y8 1516 aa33.65■■■□□ 2.98
CNTNAP3B-212ENST00000617422 CUX1P39880 1505 aa33.64■■■□□ 2.98
CNTNAP3B-212ENST00000617422 EHMT2Q96KQ7 1210 aa33.57■■■□□ 2.96
CNTNAP3B-212ENST00000617422 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
CNTNAP3B-212ENST00000617422 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
CNTNAP3B-212ENST00000617422 EEA1Q15075 1411 aa33.45■■■□□ 2.95
CNTNAP3B-212ENST00000617422 CSRNP3Q8WYN3 585 aa33.38■■■□□ 2.93
CNTNAP3B-212ENST00000617422 CEP164Q9UPV0 1460 aa33.23■■■□□ 2.91
CNTNAP3B-212ENST00000617422 FGD5Q6ZNL6 1462 aa33.22■■■□□ 2.91
CNTNAP3B-212ENST00000617422 PDS5BQ9NTI5 1447 aa33.2■■■□□ 2.9
CNTNAP3B-212ENST00000617422 DNMBPQ6XZF7 1577 aa33.19■■■□□ 2.9
CNTNAP3B-212ENST00000617422 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
CNTNAP3B-212ENST00000617422 TOPBP1Q92547 1522 aa33.17■■■□□ 2.9
CNTNAP3B-212ENST00000617422 URB2Q14146 1524 aaKnown RBP33.14■■■□□ 2.9
CNTNAP3B-212ENST00000617422 KIF21BO75037 1637 aa33.11■■■□□ 2.89
CNTNAP3B-212ENST00000617422 GOLGA3Q08378 1498 aa33.09■■■□□ 2.89
CNTNAP3B-212ENST00000617422 KIF27Q86VH2 1401 aa33.06■■■□□ 2.88
CNTNAP3B-212ENST00000617422 POLA1P09884 1462 aaPredicted RBP33.04■■■□□ 2.88
CNTNAP3B-212ENST00000617422 TNIKQ9UKE5 1360 aa33.02■■■□□ 2.88
CNTNAP3B-212ENST00000617422 CUX2O14529 1486 aa33.02■■■□□ 2.88
CNTNAP3B-212ENST00000617422 RAPGEF2Q9Y4G8 1499 aa33.01■■■□□ 2.87
CNTNAP3B-212ENST00000617422 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
CNTNAP3B-212ENST00000617422 UBTFP17480 764 aaKnown RBP32.98■■■□□ 2.87
CNTNAP3B-212ENST00000617422 PRXQ9BXM0 1461 aa32.95■■■□□ 2.87
CNTNAP3B-212ENST00000617422 CEP162Q5TB80 1403 aa32.92■■■□□ 2.86
CNTNAP3B-212ENST00000617422 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
CNTNAP3B-212ENST00000617422 IGF1RP08069 1367 aa32.85■■■□□ 2.85
CNTNAP3B-212ENST00000617422 ERICH3Q5RHP9 1530 aa32.83■■■□□ 2.85
CNTNAP3B-212ENST00000617422 MRC2Q9UBG0 1479 aa32.81■■■□□ 2.84
CNTNAP3B-212ENST00000617422 WDR97A6NE52 1622 aa32.8■■■□□ 2.84
CNTNAP3B-212ENST00000617422 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
CNTNAP3B-212ENST00000617422 WDR62O43379 1518 aa32.65■■■□□ 2.82
CNTNAP3B-212ENST00000617422 CARMIL1Q5VZK9 1371 aa32.64■■■□□ 2.82
CNTNAP3B-212ENST00000617422 TDRD9Q8NDG6 1382 aaKnown RBP32.64■■■□□ 2.82
CNTNAP3B-212ENST00000617422 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
CNTNAP3B-212ENST00000617422 ABCA5Q8WWZ7 1642 aa32.63■■■□□ 2.81
CNTNAP3B-212ENST00000617422 CLIP1P30622 1438 aa32.6■■■□□ 2.81
CNTNAP3B-212ENST00000617422 THOC2Q8NI27 1593 aaKnown RBP32.56■■■□□ 2.8
CNTNAP3B-212ENST00000617422 PCGF6Q9BYE7 350 aa32.54■■■□□ 2.8
CNTNAP3B-212ENST00000617422 RANGAP1P46060 587 aaPredicted RBP32.53■■■□□ 2.8
CNTNAP3B-212ENST00000617422 GAPVD1Q14C86 1478 aa32.53■■■□□ 2.8
CNTNAP3B-212ENST00000617422 CUL7Q14999 1698 aa32.48■■■□□ 2.79
CNTNAP3B-212ENST00000617422 PPARGC1BQ86YN6 1023 aaKnown RBP32.45■■■□□ 2.79
CNTNAP3B-212ENST00000617422 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.78
CNTNAP3B-212ENST00000617422 IFT140Q96RY7 1462 aa32.4■■■□□ 2.78
CNTNAP3B-212ENST00000617422 TRIM26Q12899 539 aaPredicted RBP32.39■■■□□ 2.78
CNTNAP3B-212ENST00000617422 ZNF608Q9ULD9 1512 aaPredicted RBP32.39■■■□□ 2.78
CNTNAP3B-212ENST00000617422 PBRM1Q86U86 1689 aa32.36■■■□□ 2.77
CNTNAP3B-212ENST00000617422 ARAP1Q96P48 1450 aa32.33■■■□□ 2.77
CNTNAP3B-212ENST00000617422 VPS8Q8N3P4 1428 aa32.33■■■□□ 2.77
CNTNAP3B-212ENST00000617422 ARHGAP35Q9NRY4 1499 aa32.28■■■□□ 2.76
CNTNAP3B-212ENST00000617422 HRCP23327 699 aa32.23■■■□□ 2.75
CNTNAP3B-212ENST00000617422 GRIN2BQ13224 1484 aa32.22■■■□□ 2.75
CNTNAP3B-212ENST00000617422 EIF4G3O43432 1585 aaKnown RBP32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms